RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 ERFEQ4G0M1 354 aa11.34□□□□□ -0.59
SMAD1-207ENST00000507594 ZBTB38Q8NAP3 1195 aaPredicted RBP11.34□□□□□ -0.59
SMAD1-207ENST00000507594 HDAC5Q9UQL6 1122 aa11.34□□□□□ -0.59
SMAD1-207ENST00000507594 IRS4O14654 1257 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-207ENST00000507594 NTSR2O95665 410 aa11.33□□□□□ -0.6
SMAD1-207ENST00000507594 PCCAP05165 728 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-207ENST00000507594 HCLS1P14317 486 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-207ENST00000507594 NBR1Q14596 966 aa11.33□□□□□ -0.6
SMAD1-207ENST00000507594 PRR5LQ6MZQ0 368 aa11.33□□□□□ -0.6
SMAD1-207ENST00000507594 MEIS3Q99687 375 aa11.33□□□□□ -0.6
SMAD1-207ENST00000507594 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
SMAD1-207ENST00000507594 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
SMAD1-207ENST00000507594 RNF123Q5XPI4 1314 aa11.33□□□□□ -0.6
SMAD1-207ENST00000507594 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-207ENST00000507594 TM4SF1P30408 202 aa11.32□□□□□ -0.6
SMAD1-207ENST00000507594 TRIM28Q13263 835 aaKnown RBP11.32□□□□□ -0.6
SMAD1-207ENST00000507594 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-207ENST00000507594 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
SMAD1-207ENST00000507594 LAMB2P55268 1798 aa11.31□□□□□ -0.6
SMAD1-207ENST00000507594 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
SMAD1-207ENST00000507594 GNAI2P04899 355 aa11.31□□□□□ -0.6
SMAD1-207ENST00000507594 NBPF7P0C2Y1 421 aaPredicted RBP11.31□□□□□ -0.6
SMAD1-207ENST00000507594 TAF7LQ5H9L4 462 aa11.31□□□□□ -0.6
SMAD1-207ENST00000507594 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
SMAD1-207ENST00000507594 NLRP3Q96P20 1036 aa11.31□□□□□ -0.6
SMAD1-207ENST00000507594 LRRFIP2Q9Y608 721 aaKnown RBP11.31□□□□□ -0.6
SMAD1-207ENST00000507594 MYH3P11055 1940 aa11.31□□□□□ -0.6
SMAD1-207ENST00000507594 PDE8AO60658 829 aa11.3□□□□□ -0.6
SMAD1-207ENST00000507594 PDE6BP35913 854 aa11.3□□□□□ -0.6
SMAD1-207ENST00000507594 SYNE4Q8N205 404 aa11.3□□□□□ -0.6
SMAD1-207ENST00000507594 EXOC6Q8TAG9 804 aa11.3□□□□□ -0.6
SMAD1-207ENST00000507594 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
SMAD1-207ENST00000507594 USP44Q9H0E7 712 aa11.3□□□□□ -0.6
SMAD1-207ENST00000507594 CDHR2Q9BYE9 1310 aa11.3□□□□□ -0.6
SMAD1-207ENST00000507594 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
SMAD1-207ENST00000507594 H7C1W4 665 aa11.29□□□□□ -0.6
SMAD1-207ENST00000507594 PRR29P0C7W0 189 aa11.29□□□□□ -0.6
SMAD1-207ENST00000507594 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
SMAD1-207ENST00000507594 C2CD5Q86YS7 1000 aa11.29□□□□□ -0.6
SMAD1-207ENST00000507594 ZNF622Q969S3 477 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMAD1-207ENST00000507594 TNRC6CQ9HCJ0 1690 aaKnown RBP11.29□□□□□ -0.6
SMAD1-207ENST00000507594 H0YIN7 160 aa11.28□□□□□ -0.6
SMAD1-207ENST00000507594 CTSWP56202 376 aa11.28□□□□□ -0.6
SMAD1-207ENST00000507594 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
SMAD1-207ENST00000507594 DDX46Q7L014 1031 aaKnown RBP11.28□□□□□ -0.6
SMAD1-207ENST00000507594 BRIP1Q9BX63 1249 aa11.28□□□□□ -0.6
SMAD1-207ENST00000507594 BICC1Q9H694 974 aaKnown RBP11.28□□□□□ -0.6
SMAD1-207ENST00000507594 NRXN2Q9P2S2 1712 aa11.28□□□□□ -0.6
SMAD1-207ENST00000507594 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
SMAD1-207ENST00000507594 ZBTB7BO15156 539 aaPredicted RBP11.27□□□□□ -0.61
SMAD1-207ENST00000507594 CCDC57Q2TAC2 916 aa11.27□□□□□ -0.61
SMAD1-207ENST00000507594 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.61
SMAD1-207ENST00000507594 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
SMAD1-207ENST00000507594 CACNA1SQ13698 1873 aa11.27□□□□□ -0.61
SMAD1-207ENST00000507594 ANKRD31Q8N7Z5 1873 aa11.27□□□□□ -0.61
SMAD1-207ENST00000507594 ANKRD18BA2A2Z9 1011 aa11.26□□□□□ -0.61
SMAD1-207ENST00000507594 SRGAP3O43295 1099 aa11.26□□□□□ -0.61
SMAD1-207ENST00000507594 HMMRO75330 724 aa11.26□□□□□ -0.61
SMAD1-207ENST00000507594 PTGER2P43116 358 aa11.26□□□□□ -0.61
SMAD1-207ENST00000507594 IFIT5Q13325 482 aaKnown RBP11.26□□□□□ -0.61
SMAD1-207ENST00000507594 OS9Q13438 667 aaPredicted RBP11.26□□□□□ -0.61
SMAD1-207ENST00000507594 FAM161AQ3B820 660 aa11.26□□□□□ -0.61
SMAD1-207ENST00000507594 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
SMAD1-207ENST00000507594 BCL11AQ9H165 835 aa11.26□□□□□ -0.61
SMAD1-207ENST00000507594 TMX4Q9H1E5 349 aaPredicted RBP11.26□□□□□ -0.61
SMAD1-207ENST00000507594 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
SMAD1-207ENST00000507594 UTYO14607 1347 aa11.26□□□□□ -0.61
SMAD1-207ENST00000507594 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
SMAD1-207ENST00000507594 CHRNA5P30532 468 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 IGHMBP2P38935 993 aaKnown RBP11.25□□□□□ -0.61
SMAD1-207ENST00000507594 CASP7P55210 303 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 EPHA10Q5JZY3 1008 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 SLC10A5Q5PT55 438 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
SMAD1-207ENST00000507594 GREM2Q9H772 168 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 ZBTB40Q9NUA8 1239 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 COL11A2P13942 1736 aaPredicted RBP11.25□□□□□ -0.61
SMAD1-207ENST00000507594 RIC1Q4ADV7 1423 aa11.25□□□□□ -0.61
SMAD1-207ENST00000507594 STK25O00506 426 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 NPR1P16066 1061 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 ITGA6P23229 1130 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
SMAD1-207ENST00000507594 ANKRD18AQ8IVF6 992 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 ANKRD44Q8N8A2 993 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 MASTLQ96GX5 879 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 MPHOSPH8Q99549 860 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 PLA2G12BQ9BX93 195 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 FHDC1Q9C0D6 1143 aaPredicted RBP11.24□□□□□ -0.61
SMAD1-207ENST00000507594 CD2APQ9Y5K6 639 aa11.24□□□□□ -0.61
SMAD1-207ENST00000507594 A0A0G2JLW4 131 aa11.23□□□□□ -0.61
SMAD1-207ENST00000507594 DPEP1P16444 411 aa11.23□□□□□ -0.61
SMAD1-207ENST00000507594 FOXO4P98177 505 aa11.23□□□□□ -0.61
SMAD1-207ENST00000507594 AAMPQ13685 434 aa11.23□□□□□ -0.61
SMAD1-207ENST00000507594 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
SMAD1-207ENST00000507594 TTLL11Q8NHH1 800 aa11.23□□□□□ -0.61
SMAD1-207ENST00000507594 SIL1Q9H173 461 aa11.23□□□□□ -0.61
SMAD1-207ENST00000507594 CNNM1Q9NRU3 951 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms