RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 FMR1NBQ8N0W7 255 aaPredicted RBP8.76□□□□□ -1.01
SPCS3-202ENST00000507001 ZNF594Q96JF6 807 aaPredicted RBP8.76□□□□□ -1.01
SPCS3-202ENST00000507001 KRTAP9-6A0A140TA67 174 aa8.75□□□□□ -1.01
SPCS3-202ENST00000507001 ELOAQ14241 798 aaKnown RBP8.75□□□□□ -1.01
SPCS3-202ENST00000507001 DTWD1Q8N5C7 304 aa8.75□□□□□ -1.01
SPCS3-202ENST00000507001 SSBP4Q9BWG4 385 aaPredicted RBP8.75□□□□□ -1.01
SPCS3-202ENST00000507001 C11orf16Q9NQ32 467 aa8.75□□□□□ -1.01
SPCS3-202ENST00000507001 DNAJB12Q9NXW2 375 aaKnown RBP8.75□□□□□ -1.01
SPCS3-202ENST00000507001 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.75□□□□□ -1.01
SPCS3-202ENST00000507001 TMEM88BA6NKF7 163 aa8.74□□□□□ -1.01
SPCS3-202ENST00000507001 SEC13P55735 322 aa8.74□□□□□ -1.01
SPCS3-202ENST00000507001 CCINQ13939 588 aa8.74□□□□□ -1.01
SPCS3-202ENST00000507001 LRP8Q14114 963 aa8.74□□□□□ -1.01
SPCS3-202ENST00000507001 PSAPL1Q6NUJ1 521 aa8.74□□□□□ -1.01
SPCS3-202ENST00000507001 ANKMY2Q8IV38 441 aa8.74□□□□□ -1.01
SPCS3-202ENST00000507001 FRRS1LQ9P0K9 344 aa8.74□□□□□ -1.01
SPCS3-202ENST00000507001 DMGDHQ9UI17 866 aaKnown RBP8.74□□□□□ -1.01
SPCS3-202ENST00000507001 NAGPAQ9UK23 515 aa8.74□□□□□ -1.01
SPCS3-202ENST00000507001 MAP3K6O95382 1288 aa8.73□□□□□ -1.01
SPCS3-202ENST00000507001 PDE4CQ08493 712 aa8.73□□□□□ -1.01
SPCS3-202ENST00000507001 TBC1D8BQ0IIM8 1120 aa8.73□□□□□ -1.01
SPCS3-202ENST00000507001 NUDT8Q8WV74 236 aa8.73□□□□□ -1.01
SPCS3-202ENST00000507001 SCG3Q8WXD2 468 aaKnown RBP8.73□□□□□ -1.01
SPCS3-202ENST00000507001 PNMA5Q96PV4 448 aa8.73□□□□□ -1.01
SPCS3-202ENST00000507001 ZMIZ1Q9ULJ6 1067 aa8.73□□□□□ -1.01
SPCS3-202ENST00000507001 NOVA2Q9UNW9 492 aaKnown RBP8.73□□□□□ -1.01
SPCS3-202ENST00000507001 RGS9O75916 674 aaPredicted RBP8.72□□□□□ -1.01
SPCS3-202ENST00000507001 EPB42P16452 691 aa8.72□□□□□ -1.01
SPCS3-202ENST00000507001 DPYDQ12882 1025 aa8.72□□□□□ -1.01
SPCS3-202ENST00000507001 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
SPCS3-202ENST00000507001 FAM200AQ8TCP9 573 aa8.72□□□□□ -1.01
SPCS3-202ENST00000507001 STK32AQ8WU08 396 aa8.72□□□□□ -1.01
SPCS3-202ENST00000507001 NFKB1P19838 968 aa8.71□□□□□ -1.02
SPCS3-202ENST00000507001 GZF1Q9H116 711 aaPredicted RBP8.71□□□□□ -1.02
SPCS3-202ENST00000507001 IGFLR1Q9H665 355 aa8.71□□□□□ -1.02
SPCS3-202ENST00000507001 BCS1LQ9Y276 419 aa8.71□□□□□ -1.02
SPCS3-202ENST00000507001 CCDC9Q9Y3X0 531 aaKnown RBP8.71□□□□□ -1.02
SPCS3-202ENST00000507001 BRD1O95696 1058 aa8.7□□□□□ -1.02
SPCS3-202ENST00000507001 IGFBP4P22692 258 aa8.7□□□□□ -1.02
SPCS3-202ENST00000507001 TMEM164Q5U3C3 297 aa8.7□□□□□ -1.02
SPCS3-202ENST00000507001 MSL1Q68DK7 614 aa8.7□□□□□ -1.02
SPCS3-202ENST00000507001 NBPF11Q86T75 865 aa8.7□□□□□ -1.02
SPCS3-202ENST00000507001 TTC9Q92623 222 aa8.7□□□□□ -1.02
SPCS3-202ENST00000507001 TP53INP1Q96A56 240 aa8.7□□□□□ -1.02
SPCS3-202ENST00000507001 USP21Q9UK80 565 aa8.7□□□□□ -1.02
SPCS3-202ENST00000507001 GRIK5Q16478 980 aa8.69□□□□□ -1.02
SPCS3-202ENST00000507001 FBXO11Q86XK2 927 aa8.69□□□□□ -1.02
SPCS3-202ENST00000507001 DMRTC2Q8IXT2 367 aaPredicted RBP8.69□□□□□ -1.02
SPCS3-202ENST00000507001 NGLY1Q96IV0 654 aa8.69□□□□□ -1.02
SPCS3-202ENST00000507001 GRNP28799 593 aaKnown RBP8.68□□□□□ -1.02
SPCS3-202ENST00000507001 INPP5BP32019 993 aa8.68□□□□□ -1.02
SPCS3-202ENST00000507001 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
SPCS3-202ENST00000507001 TRPM4Q8TD43 1214 aa8.68□□□□□ -1.02
SPCS3-202ENST00000507001 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
SPCS3-202ENST00000507001 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
SPCS3-202ENST00000507001 GPLD1P80108 840 aa8.66□□□□□ -1.02
SPCS3-202ENST00000507001 KCNA1Q09470 495 aa8.66□□□□□ -1.02
SPCS3-202ENST00000507001 SWI5Q1ZZU3 235 aa8.66□□□□□ -1.02
SPCS3-202ENST00000507001 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.02
SPCS3-202ENST00000507001 IDH3AP50213 366 aa8.65□□□□□ -1.02
SPCS3-202ENST00000507001 ARSDP51689 593 aa8.65□□□□□ -1.02
SPCS3-202ENST00000507001 IGF2-ASQ6U949 168 aa8.65□□□□□ -1.02
SPCS3-202ENST00000507001 DHX32Q7L7V1 743 aaKnown RBP8.65□□□□□ -1.02
SPCS3-202ENST00000507001 KRTAP4-12Q9BQ66 201 aa8.65□□□□□ -1.02
SPCS3-202ENST00000507001 HINFPQ9BQA5 517 aa8.65□□□□□ -1.02
SPCS3-202ENST00000507001 CPB1P15086 417 aa8.64□□□□□ -1.03
SPCS3-202ENST00000507001 PERM1Q5SV97 790 aa8.64□□□□□ -1.03
SPCS3-202ENST00000507001 TMCO4Q5TGY1 634 aa8.64□□□□□ -1.03
SPCS3-202ENST00000507001 WFDC12Q8WWY7 111 aa8.64□□□□□ -1.03
SPCS3-202ENST00000507001 ZFATQ9P243 1243 aa8.64□□□□□ -1.03
SPCS3-202ENST00000507001 RNF112Q9ULX5 631 aa8.64□□□□□ -1.03
SPCS3-202ENST00000507001 IVNS1ABPQ9Y6Y0 642 aa8.64□□□□□ -1.03
SPCS3-202ENST00000507001 ZBTB42B2RXF5 422 aa8.63□□□□□ -1.03
SPCS3-202ENST00000507001 FOXO3O43524 673 aa8.63□□□□□ -1.03
SPCS3-202ENST00000507001 ARID4AP29374 1257 aaPredicted RBP8.63□□□□□ -1.03
SPCS3-202ENST00000507001 WFDC8Q8IUA0 241 aa8.63□□□□□ -1.03
SPCS3-202ENST00000507001 MYO19Q96H55 970 aa8.63□□□□□ -1.03
SPCS3-202ENST00000507001 SLAIN2Q9P270 581 aa8.63□□□□□ -1.03
SPCS3-202ENST00000507001 EGFRP00533 1210 aa8.62□□□□□ -1.03
SPCS3-202ENST00000507001 NOS3P29474 1203 aa8.62□□□□□ -1.03
SPCS3-202ENST00000507001 NRLP54845 237 aa8.62□□□□□ -1.03
SPCS3-202ENST00000507001 FAM69CQ0P6D2 419 aa8.62□□□□□ -1.03
SPCS3-202ENST00000507001 ELMSAN1Q6PJG2 1045 aa8.62□□□□□ -1.03
SPCS3-202ENST00000507001 SLC51AQ86UW1 340 aa8.62□□□□□ -1.03
SPCS3-202ENST00000507001 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
SPCS3-202ENST00000507001 IFT43Q96FT9 208 aa8.62□□□□□ -1.03
SPCS3-202ENST00000507001 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
SPCS3-202ENST00000507001 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
SPCS3-202ENST00000507001 QTRT2Q9H974 415 aaKnown RBP8.61□□□□□ -1.03
SPCS3-202ENST00000507001 KLK14Q9P0G3 267 aa8.61□□□□□ -1.03
SPCS3-202ENST00000507001 DLL1O00548 723 aa8.6□□□□□ -1.03
SPCS3-202ENST00000507001 RARAP10276 462 aa8.6□□□□□ -1.03
SPCS3-202ENST00000507001 WEE1P30291 646 aa8.6□□□□□ -1.03
SPCS3-202ENST00000507001 IREB2P48200 963 aaKnown RBP8.6□□□□□ -1.03
SPCS3-202ENST00000507001 MFAP1P55081 439 aaKnown RBP8.6□□□□□ -1.03
SPCS3-202ENST00000507001 DGKZQ13574 1117 aa8.6□□□□□ -1.03
SPCS3-202ENST00000507001 SRA1Q9HD15 236 aaKnown RBP8.6□□□□□ -1.03
SPCS3-202ENST00000507001 MICAL2O94851 1124 aa8.59□□□□□ -1.03
SPCS3-202ENST00000507001 TARSP26639 723 aaKnown RBP8.59□□□□□ -1.03
SPCS3-202ENST00000507001 C11orf91Q3C1V1 193 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms