RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ELMSAN1Q6PJG2 1045 aa6.1□□□□□ -1.43
TOPBP1-205ENST00000506779 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-205ENST00000506779 ANKIB1Q9P2G1 1089 aa6.1□□□□□ -1.43
TOPBP1-205ENST00000506779 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-205ENST00000506779 PCSK7Q16549 785 aa6.09□□□□□ -1.43
TOPBP1-205ENST00000506779 UVSSAQ2YD98 709 aa6.09□□□□□ -1.43
TOPBP1-205ENST00000506779 VSIG10LQ86VR7 867 aa6.09□□□□□ -1.43
TOPBP1-205ENST00000506779 CEP41Q9BYV8 373 aa6.09□□□□□ -1.43
TOPBP1-205ENST00000506779 GSX2Q9BZM3 304 aa6.09□□□□□ -1.43
TOPBP1-205ENST00000506779 SCHIP1Q9P0W5 487 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-205ENST00000506779 ZNF232Q9UNY5 417 aa6.09□□□□□ -1.43
TOPBP1-205ENST00000506779 CARMIL2Q6F5E8 1435 aa6.08□□□□□ -1.44
TOPBP1-205ENST00000506779 CILP2Q8IUL8 1156 aa6.08□□□□□ -1.44
TOPBP1-205ENST00000506779 CLEC10AQ8IUN9 316 aa6.08□□□□□ -1.44
TOPBP1-205ENST00000506779 FAM46AQ96IP4 442 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-205ENST00000506779 PNMA5Q96PV4 448 aa6.08□□□□□ -1.44
TOPBP1-205ENST00000506779 FAM83CQ9BQN1 747 aa6.08□□□□□ -1.44
TOPBP1-205ENST00000506779 NFKB1P19838 968 aa6.07□□□□□ -1.44
TOPBP1-205ENST00000506779 ZNF280CQ8ND82 737 aa6.07□□□□□ -1.44
TOPBP1-205ENST00000506779 MYRFLQ96LU7 910 aa6.07□□□□□ -1.44
TOPBP1-205ENST00000506779 SRA1Q9HD15 236 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-205ENST00000506779 DCAF11Q8TEB1 546 aa6.06□□□□□ -1.44
TOPBP1-205ENST00000506779 CHIC2Q9UKJ5 165 aa6.06□□□□□ -1.44
TOPBP1-205ENST00000506779 ZBTB42B2RXF5 422 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 GRNP28799 593 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 ABL2P42684 1182 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 VAC14Q08AM6 782 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 SETDB1Q15047 1291 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 TMEM132AQ24JP5 1023 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 SH3PXD2AQ5TCZ1 1133 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 LCNL1Q6ZST4 164 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 SLC38A3Q99624 504 aa6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 SMG9Q9H0W8 520 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-205ENST00000506779 FOSL1P15407 271 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 IRF5Q13568 498 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 TTLL10Q6ZVT0 673 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 MAP4K3Q8IVH8 894 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 FAM20CQ8IXL6 584 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 AGBL5Q8NDL9 886 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 SUSD3Q96L08 255 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 CSRNP1Q96S65 589 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 LEMD3Q9Y2U8 911 aa6.04□□□□□ -1.44
TOPBP1-205ENST00000506779 SERTM1A2A2V5 107 aa6.03□□□□□ -1.44
TOPBP1-205ENST00000506779 CCINQ13939 588 aa6.03□□□□□ -1.44
TOPBP1-205ENST00000506779 C1orf53Q5VUE5 145 aa6.03□□□□□ -1.44
TOPBP1-205ENST00000506779 GDPD2Q9HCC8 539 aa6.03□□□□□ -1.44
TOPBP1-205ENST00000506779 BIN1O00499 593 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 BACH1O14867 736 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 MAP3K6O95382 1288 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 CFPP27918 469 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 MLLT1Q03111 559 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 SEMA3FQ13275 785 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 WASHC4Q2M389 1173 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 BEND4Q6ZU67 534 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 TRPM4Q8TD43 1214 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 RAPGEFL1Q9UHV5 662 aa6.02□□□□□ -1.45
TOPBP1-205ENST00000506779 WISP1O95388 367 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 MAP7D1Q3KQU3 841 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 TBCELQ5QJ74 424 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 BTLAQ7Z6A9 289 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 C1QL4Q86Z23 238 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 SLC9A9Q8IVB4 645 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 IL22RA1Q8N6P7 574 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 PLPP7Q8NBV4 271 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 FLCNQ8NFG4 579 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 MFSD14AQ96MC6 490 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 TOX2Q96NM4 488 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 PAK6Q9NQU5 681 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 ATG3Q9NT62 314 aa6.01□□□□□ -1.45
TOPBP1-205ENST00000506779 SIAH1Q8IUQ4 282 aa6□□□□□ -1.45
TOPBP1-205ENST00000506779 KCNF1Q9H3M0 494 aa6□□□□□ -1.45
TOPBP1-205ENST00000506779 LMCD1Q9NZU5 365 aa6□□□□□ -1.45
TOPBP1-205ENST00000506779 BMP3P12645 472 aa5.99□□□□□ -1.45
TOPBP1-205ENST00000506779 SOX11P35716 441 aa5.99□□□□□ -1.45
TOPBP1-205ENST00000506779 ACAD11Q709F0 780 aa5.99□□□□□ -1.45
TOPBP1-205ENST00000506779 DHX32Q7L7V1 743 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-205ENST00000506779 BHLHE22Q8NFJ8 381 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-205ENST00000506779 GIMAP7Q8NHV1 300 aa5.99□□□□□ -1.45
TOPBP1-205ENST00000506779 BSDC1Q9NW68 430 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-205ENST00000506779 EPHA4P54764 986 aa5.98□□□□□ -1.45
TOPBP1-205ENST00000506779 GPLD1P80108 840 aa5.98□□□□□ -1.45
TOPBP1-205ENST00000506779 MESP2Q0VG99 397 aa5.98□□□□□ -1.45
TOPBP1-205ENST00000506779 ZSCAN18Q8TBC5 510 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-205ENST00000506779 PHACTR1Q9C0D0 580 aa5.98□□□□□ -1.45
TOPBP1-205ENST00000506779 HCN4Q9Y3Q4 1203 aa5.98□□□□□ -1.45
TOPBP1-205ENST00000506779 MCM6Q14566 821 aa5.97□□□□□ -1.45
TOPBP1-205ENST00000506779 GDF6Q6KF10 455 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-205ENST00000506779 HFE2Q6ZVN8 426 aa5.97□□□□□ -1.45
TOPBP1-205ENST00000506779 WWC1Q8IX03 1113 aa5.97□□□□□ -1.45
TOPBP1-205ENST00000506779 COL26A1Q96A83 441 aa5.97□□□□□ -1.45
TOPBP1-205ENST00000506779 FAM84AQ96KN4 292 aa5.97□□□□□ -1.45
TOPBP1-205ENST00000506779 ZFATQ9P243 1243 aa5.97□□□□□ -1.45
TOPBP1-205ENST00000506779 PCDHGA11Q9Y5H2 935 aa5.97□□□□□ -1.45
TOPBP1-205ENST00000506779 PSPNO60542 156 aa5.96□□□□□ -1.46
TOPBP1-205ENST00000506779 F13BP05160 661 aa5.96□□□□□ -1.46
TOPBP1-205ENST00000506779 ZSCAN22P10073 491 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-205ENST00000506779 EIF2AK2P19525 551 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-205ENST00000506779 PSME1Q06323 249 aa5.96□□□□□ -1.46
TOPBP1-205ENST00000506779 EML3Q32P44 896 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms