RNA–Protein interactions for RNA: ENST00000506710.1

FAM53C-205, Transcript of family with sequence similarity 53 member C, human

TSL 3

Gene FAM53C, Length 400 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM53C-205	ENST00000506710	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.56	□□□□□ -0.24
FAM53C-205	ENST00000506710	KDM2B	Q8NHM5	1336 aa		13.56	□□□□□ -0.24
FAM53C-205	ENST00000506710	CDHR2	Q9BYE9	1310 aa		13.56	□□□□□ -0.24
FAM53C-205	ENST00000506710	MYH3	P11055	1940 aa		13.56	□□□□□ -0.24
FAM53C-205	ENST00000506710	ABCC12	Q96J65	1359 aa		13.56	□□□□□ -0.24
FAM53C-205	ENST00000506710	ATP5J2-PTCD1	G3V325	749 aa		13.55	□□□□□ -0.24
FAM53C-205	ENST00000506710	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
FAM53C-205	ENST00000506710	C9orf131	Q5VYM1	1079 aa		13.55	□□□□□ -0.24
FAM53C-205	ENST00000506710	SUPT20H	Q8NEM7	779 aa		13.55	□□□□□ -0.24
FAM53C-205	ENST00000506710	RNF181	Q9P0P0	153 aa		13.55	□□□□□ -0.24
FAM53C-205	ENST00000506710	PTPRC	P08575	1304 aa		13.55	□□□□□ -0.24
FAM53C-205	ENST00000506710	DDX60	Q8IY21	1712 aa	Known RBP	13.54	□□□□□ -0.24
FAM53C-205	ENST00000506710	SENP3-EIF4A1	A0A087X0R7	540 aa		13.54	□□□□□ -0.24
FAM53C-205	ENST00000506710	IRS4	O14654	1257 aa	Predicted RBP	13.54	□□□□□ -0.24
FAM53C-205	ENST00000506710	CCDC152	Q4G0S7	254 aa		13.54	□□□□□ -0.24
FAM53C-205	ENST00000506710	SP8	Q8IXZ3	490 aa		13.54	□□□□□ -0.24
FAM53C-205	ENST00000506710	FAM89A	Q96GI7	184 aa		13.54	□□□□□ -0.24
FAM53C-205	ENST00000506710	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.53	□□□□□ -0.24
FAM53C-205	ENST00000506710	PPEF1	O14829	653 aa	Predicted RBP	13.53	□□□□□ -0.24
FAM53C-205	ENST00000506710	GRAP	Q13588	217 aa		13.53	□□□□□ -0.24
FAM53C-205	ENST00000506710	GRAPL	Q8TC17	118 aa	Predicted RBP	13.53	□□□□□ -0.24
FAM53C-205	ENST00000506710	ATP6V0A2	Q9Y487	856 aa		13.53	□□□□□ -0.24
FAM53C-205	ENST00000506710	NEURL1B	A8MQ27	555 aa		13.52	□□□□□ -0.25
FAM53C-205	ENST00000506710	NFKBIE	O00221	500 aa		13.52	□□□□□ -0.25
FAM53C-205	ENST00000506710	HCLS1	P14317	486 aa	Predicted RBP	13.52	□□□□□ -0.25
FAM53C-205	ENST00000506710	BRPF1	P55201	1214 aa	Predicted RBP	13.52	□□□□□ -0.25
FAM53C-205	ENST00000506710	ALDH1L1	O75891	902 aa		13.51	□□□□□ -0.25
FAM53C-205	ENST00000506710	G2E3	Q7L622	706 aa		13.51	□□□□□ -0.25
FAM53C-205	ENST00000506710	PLA2G12B	Q9BX93	195 aa		13.51	□□□□□ -0.25
FAM53C-205	ENST00000506710	HDAC5	Q9UQL6	1122 aa		13.51	□□□□□ -0.25
FAM53C-205	ENST00000506710	ABCC4	O15439	1325 aa		13.5	□□□□□ -0.25
FAM53C-205	ENST00000506710	GLTPD2	A6NH11	291 aa		13.5	□□□□□ -0.25
FAM53C-205	ENST00000506710		H7C1W4	665 aa		13.5	□□□□□ -0.25
FAM53C-205	ENST00000506710	PITPNM1	O00562	1244 aa		13.5	□□□□□ -0.25
FAM53C-205	ENST00000506710	IGKV5-2	P06315	115 aa		13.5	□□□□□ -0.25
FAM53C-205	ENST00000506710	GCKR	Q14397	625 aa		13.5	□□□□□ -0.25
FAM53C-205	ENST00000506710	JDP2	Q8WYK2	163 aa		13.5	□□□□□ -0.25
FAM53C-205	ENST00000506710	CDC5L	Q99459	802 aa	Known RBP	13.5	□□□□□ -0.25
FAM53C-205	ENST00000506710	TCERG1	O14776	1098 aa	Known RBP	13.49	□□□□□ -0.25
FAM53C-205	ENST00000506710	RPS8	P62241	208 aa	Known RBP	13.49	□□□□□ -0.25
FAM53C-205	ENST00000506710	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
FAM53C-205	ENST00000506710	RASSF7	Q02833	373 aa		13.49	□□□□□ -0.25
FAM53C-205	ENST00000506710	TIAM2	Q8IVF5	1701 aa		13.49	□□□□□ -0.25
FAM53C-205	ENST00000506710	UTRN	P46939	3433 aa		13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	RTL9	Q8NET4	1388 aa		13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	IARS	P41252	1262 aa	Known RBP	13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	BEND3	Q5T5X7	828 aa		13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	SYNE4	Q8N205	404 aa		13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	MPND	Q8N594	471 aa		13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	MRPL50	Q8N5N7	158 aa	Known RBP	13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	SRCIN1	Q9C0H9	1055 aa		13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	CLEC11A	Q9Y240	323 aa		13.48	□□□□□ -0.25
FAM53C-205	ENST00000506710	KIF16B	Q96L93	1317 aa		13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	IPO8	O15397	1037 aa	Known RBP	13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	CTSW	P56202	376 aa		13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	CWF19L2	Q2TBE0	894 aa	Known RBP	13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	DPP8	Q6V1X1	898 aa	Predicted RBP	13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	ANKRD18A	Q8IVF6	992 aa		13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	ARHGAP45	Q92619	1136 aa		13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	CDCA7L	Q96GN5	454 aa		13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	EYA3	Q99504	573 aa		13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.47	□□□□□ -0.25
FAM53C-205	ENST00000506710	GOLGB1	Q14789	3259 aa	Known RBP	13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	ZBED9	Q6R2W3	1325 aa		13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	TOMM70	O94826	608 aa		13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	VEGFA	P15692	232 aa	Predicted RBP	13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	RTL5	Q5HYW3	569 aa	Predicted RBP	13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	C3orf67	Q6ZVT6	689 aa		13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	TTLL11	Q8NHH1	800 aa		13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	SSH1	Q8WYL5	1049 aa		13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	API5	Q9BZZ5	524 aa	Known RBP	13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	SMC4	Q9NTJ3	1288 aa		13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	LRRC37A	A6NMS7	1700 aa		13.46	□□□□□ -0.25
FAM53C-205	ENST00000506710	SNED1	Q8TER0	1413 aa		13.46	□□□□□ -0.26
FAM53C-205	ENST00000506710	SCN4A	P35499	1836 aa		13.46	□□□□□ -0.26
FAM53C-205	ENST00000506710	IQCA1L	A6NCM1	817 aa		13.45	□□□□□ -0.26
FAM53C-205	ENST00000506710	GRM8	O00222	908 aa		13.45	□□□□□ -0.26
FAM53C-205	ENST00000506710	CSF1R	P07333	972 aa		13.45	□□□□□ -0.26
FAM53C-205	ENST00000506710	PRR29	P0C7W0	189 aa		13.45	□□□□□ -0.26
FAM53C-205	ENST00000506710	EIF6	P56537	245 aa	Known RBP	13.45	□□□□□ -0.26
FAM53C-205	ENST00000506710	UBE3B	Q7Z3V4	1068 aa		13.45	□□□□□ -0.26
FAM53C-205	ENST00000506710	PLCD3	Q8N3E9	789 aa		13.45	□□□□□ -0.26
FAM53C-205	ENST00000506710	PODXL2	Q9NZ53	605 aa		13.45	□□□□□ -0.26
FAM53C-205	ENST00000506710	WDR90	Q96KV7	1748 aa		13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	TAF1	P21675	1872 aa		13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	FZD9	O00144	591 aa		13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	IGHMBP2	P38935	993 aa	Known RBP	13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	CCT4	P50991	539 aa	Known RBP	13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	C1QTNF8	P60827	252 aa		13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	SLC4A10	Q6U841	1118 aa		13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	LARGE2	Q8N3Y3	721 aa		13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	BSDC1	Q9NW68	430 aa	Predicted RBP	13.44	□□□□□ -0.26
FAM53C-205	ENST00000506710	UTY	O14607	1347 aa		13.43	□□□□□ -0.26
FAM53C-205	ENST00000506710		F6X3S4	739 aa		13.43	□□□□□ -0.26
FAM53C-205	ENST00000506710	KIAA2012	Q0VF49	1180 aa		13.43	□□□□□ -0.26
FAM53C-205	ENST00000506710	NIM1K	Q8IY84	436 aa		13.43	□□□□□ -0.26
FAM53C-205	ENST00000506710	GPC2	Q8N158	579 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms