RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 BLOC1S2Q6QNY1 142 aa20.1■□□□□ 0.81
SQSTM1-211ENST00000506690 CLASRPQ8N2M8 674 aaKnown RBP20.1■□□□□ 0.81
SQSTM1-211ENST00000506690 EID1Q9Y6B2 187 aa20.1■□□□□ 0.81
SQSTM1-211ENST00000506690 RPS6KB1P23443 525 aa20.09■□□□□ 0.81
SQSTM1-211ENST00000506690 BABAM1Q9NWV8 329 aa20.09■□□□□ 0.81
SQSTM1-211ENST00000506690 NPHP4O75161 1426 aaPredicted RBP20.09■□□□□ 0.81
SQSTM1-211ENST00000506690 CTAGE5O15320 804 aa20.08■□□□□ 0.81
SQSTM1-211ENST00000506690 FILIP1Q7Z7B0 1213 aa20.08■□□□□ 0.81
SQSTM1-211ENST00000506690 DHX40Q8IX18 779 aaKnown RBP20.08■□□□□ 0.81
SQSTM1-211ENST00000506690 NOL10Q9BSC4 688 aaKnown RBP20.08■□□□□ 0.81
SQSTM1-211ENST00000506690 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.8
SQSTM1-211ENST00000506690 SLC26A8Q96RN1 970 aa20.08■□□□□ 0.8
SQSTM1-211ENST00000506690 FHOD1Q9Y613 1164 aa20.08■□□□□ 0.8
SQSTM1-211ENST00000506690 ACEP12821 1306 aa20.08■□□□□ 0.8
SQSTM1-211ENST00000506690 TOPAZ1Q8N9V7 1692 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 FAM227BQ96M60 508 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 TCEANC2Q96MN5 208 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 EYA1Q99502 592 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 USP6P35125 1406 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 GPATCH3Q96I76 525 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 FLT4P35916 1363 aa20.07■□□□□ 0.8
SQSTM1-211ENST00000506690 ADAMTS13Q76LX8 1427 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 GSDMDP57764 484 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 MTX1Q13505 466 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 BEND3Q5T5X7 828 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 DNAJC2Q99543 621 aaKnown RBP20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 CFAP45Q9UL16 551 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 NAP1L2Q9ULW6 460 aaPredicted RBP20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 SBNO1A3KN83 1393 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 VGLL3A8MV65 326 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 HIP1O00291 1037 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 PDE4CQ08493 712 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 NMIQ13287 307 aaPredicted RBP20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 ERCC6LQ2NKX8 1250 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 OSBPL5Q9H0X9 879 aaPredicted RBP20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 PLEKHG1Q9ULL1 1385 aa20.06■□□□□ 0.8
SQSTM1-211ENST00000506690 BECN2A8MW95 431 aa20.05■□□□□ 0.8
SQSTM1-211ENST00000506690 CAPN2P17655 700 aa20.05■□□□□ 0.8
SQSTM1-211ENST00000506690 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
SQSTM1-211ENST00000506690 ZSCAN16Q9H4T2 348 aaPredicted RBP20.05■□□□□ 0.8
SQSTM1-211ENST00000506690 SNW1Q13573 536 aaKnown RBP20.05■□□□□ 0.8
SQSTM1-211ENST00000506690 E4F1Q66K89 784 aaPredicted RBP20.05■□□□□ 0.8
SQSTM1-211ENST00000506690 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
SQSTM1-211ENST00000506690 TAF6LQ9Y6J9 622 aa20.05■□□□□ 0.8
SQSTM1-211ENST00000506690 PLEKHG3A1L390 1219 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 CLCN6P51797 869 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 TSGA10IPQ3SY00 556 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 MYH15Q9Y2K3 1946 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 SOX12O15370 315 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 JAK2O60674 1132 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 STK3Q13188 491 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 NBPF11Q86T75 865 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 BRF1Q92994 677 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 GTF3C6Q969F1 213 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 IMPACTQ9P2X3 320 aa20.04■□□□□ 0.8
SQSTM1-211ENST00000506690 ROBO2Q9HCK4 1378 aa20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 JCADQ9P266 1359 aa20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 NPHP1O15259 732 aa20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 IFIT2P09913 472 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 ADD1P35611 737 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 IPO4Q8TEX9 1081 aaKnown RBP20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 ANO10Q9NW15 660 aa20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 SLIT1O75093 1534 aa20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 PNMA6AP0CW24 399 aaPredicted RBP20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 THEMISQ8N1K5 641 aaPredicted RBP20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 PPP1R13BQ96KQ4 1090 aa20.03■□□□□ 0.8
SQSTM1-211ENST00000506690 ARHGAP23Q9P227 1491 aa20.02■□□□□ 0.8
SQSTM1-211ENST00000506690 MED23Q9ULK4 1368 aa20.02■□□□□ 0.8
SQSTM1-211ENST00000506690 PLA2G4AP47712 749 aa20.02■□□□□ 0.8
SQSTM1-211ENST00000506690 CCAR1Q8IX12 1150 aaKnown RBP20.02■□□□□ 0.8
SQSTM1-211ENST00000506690 LRRN4CLQ8ND94 238 aa20.02■□□□□ 0.8
SQSTM1-211ENST00000506690 DNAAF4Q8WXU2 420 aa20.02■□□□□ 0.8
SQSTM1-211ENST00000506690 GOLPH3LQ9H4A5 285 aa20.02■□□□□ 0.8
SQSTM1-211ENST00000506690 RCOR1Q9UKL0 485 aa20.02■□□□□ 0.8
SQSTM1-211ENST00000506690 PSDA5PKW4 1024 aaPredicted RBP20.02■□□□□ 0.79
SQSTM1-211ENST00000506690 KCNJ6P48051 423 aa20.02■□□□□ 0.79
SQSTM1-211ENST00000506690 HNRNPH2P55795 449 aaKnown RBP20.02■□□□□ 0.79
SQSTM1-211ENST00000506690 ERC1Q8IUD2 1116 aa20.02■□□□□ 0.79
SQSTM1-211ENST00000506690 HMG20BQ9P0W2 317 aa20.02■□□□□ 0.79
SQSTM1-211ENST00000506690 A0A0D9SFI3 127 aa20.01■□□□□ 0.79
SQSTM1-211ENST00000506690 ZRANB2O95218 330 aaKnown RBP eCLIP20.01■□□□□ 0.79
SQSTM1-211ENST00000506690 TUBB4AP04350 444 aa20.01■□□□□ 0.79
SQSTM1-211ENST00000506690 DDX11Q96FC9 970 aa20.01■□□□□ 0.79
SQSTM1-211ENST00000506690 ENGASEQ8NFI3 743 aa20.01■□□□□ 0.79
SQSTM1-211ENST00000506690 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.01■□□□□ 0.79
SQSTM1-211ENST00000506690 PI4KAP2A4QPH2 592 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 SYT10Q6XYQ8 523 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 CEP57L1Q8IYX8 460 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 PI4KAP1Q8N8J0 262 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 H3BQV1 296 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 IFFO2Q5TF58 517 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 AACSQ86V21 672 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 AOPEPQ8N6M6 819 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 TSPYL1Q9H0U9 437 aa20■□□□□ 0.79
SQSTM1-211ENST00000506690 NUTM2FA1L443 756 aa19.99■□□□□ 0.79
SQSTM1-211ENST00000506690 A0A087WWV3 80 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms