RNA–Protein interactions for RNA: ENST00000506029.1

SNRPCP16-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 16, humanhuman

BASIC

Gene SNRPCP16, Length 210 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP16-201ENST00000506029 TMX4Q9H1E5 349 aaPredicted RBP12.4□□□□□ -0.42
SNRPCP16-201ENST00000506029 FER1L6Q2WGJ9 1857 aa12.4□□□□□ -0.42
SNRPCP16-201ENST00000506029 F6X3S4 739 aa12.39□□□□□ -0.43
SNRPCP16-201ENST00000506029 CTSWP56202 376 aa12.39□□□□□ -0.43
SNRPCP16-201ENST00000506029 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
SNRPCP16-201ENST00000506029 API5Q9BZZ5 524 aaKnown RBP12.39□□□□□ -0.43
SNRPCP16-201ENST00000506029 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
SNRPCP16-201ENST00000506029 LRRC37AA6NMS7 1700 aa12.39□□□□□ -0.43
SNRPCP16-201ENST00000506029 GRM8O00222 908 aa12.38□□□□□ -0.43
SNRPCP16-201ENST00000506029 CASP7P55210 303 aa12.38□□□□□ -0.43
SNRPCP16-201ENST00000506029 FKBP4Q02790 459 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNRPCP16-201ENST00000506029 RASSF7Q02833 373 aa12.38□□□□□ -0.43
SNRPCP16-201ENST00000506029 RTL5Q5HYW3 569 aaPredicted RBP12.38□□□□□ -0.43
SNRPCP16-201ENST00000506029 UBE3BQ7Z3V4 1068 aa12.38□□□□□ -0.43
SNRPCP16-201ENST00000506029 CACNA1SQ13698 1873 aa12.38□□□□□ -0.43
SNRPCP16-201ENST00000506029 UTYO14607 1347 aa12.37□□□□□ -0.43
SNRPCP16-201ENST00000506029 IPO8O15397 1037 aaKnown RBP12.37□□□□□ -0.43
SNRPCP16-201ENST00000506029 CCT4P50991 539 aaKnown RBP12.37□□□□□ -0.43
SNRPCP16-201ENST00000506029 C9orf131Q5VYM1 1079 aa12.37□□□□□ -0.43
SNRPCP16-201ENST00000506029 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
SNRPCP16-201ENST00000506029 RNF181Q9P0P0 153 aa12.37□□□□□ -0.43
SNRPCP16-201ENST00000506029 SP8Q8IXZ3 490 aa12.36□□□□□ -0.43
SNRPCP16-201ENST00000506029 TTLL11Q8NHH1 800 aa12.36□□□□□ -0.43
SNRPCP16-201ENST00000506029 CDC5LQ99459 802 aaKnown RBP12.36□□□□□ -0.43
SNRPCP16-201ENST00000506029 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
SNRPCP16-201ENST00000506029 C9orf78Q9NZ63 289 aaPredicted RBP12.36□□□□□ -0.43
SNRPCP16-201ENST00000506029 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
SNRPCP16-201ENST00000506029 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
SNRPCP16-201ENST00000506029 TIAM2Q8IVF5 1701 aa12.35□□□□□ -0.43
SNRPCP16-201ENST00000506029 CSF1RP07333 972 aa12.35□□□□□ -0.43
SNRPCP16-201ENST00000506029 ZNF784Q8NCA9 323 aaPredicted RBP12.35□□□□□ -0.43
SNRPCP16-201ENST00000506029 SUPT20HQ8NEM7 779 aa12.35□□□□□ -0.43
SNRPCP16-201ENST00000506029 RTFDC1Q9BY42 306 aaPredicted RBP12.35□□□□□ -0.43
SNRPCP16-201ENST00000506029 MYH3P11055 1940 aa12.35□□□□□ -0.43
SNRPCP16-201ENST00000506029 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
SNRPCP16-201ENST00000506029 CELF1Q92879 486 aaKnown RBP12.34□□□□□ -0.43
SNRPCP16-201ENST00000506029 SBF1O95248 1867 aa12.34□□□□□ -0.43
SNRPCP16-201ENST00000506029 IARSP41252 1262 aaKnown RBP12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 PRELPP51888 382 aa12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 ATF7IPQ6VMQ6 1270 aa12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 GREM2Q9H772 168 aa12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 DUOX1Q9NRD9 1551 aa12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 LTBP1Q14766 1721 aa12.33□□□□□ -0.44
SNRPCP16-201ENST00000506029 TRIM27P14373 513 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 ITGA6P23229 1130 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 FOXO4P98177 505 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 ZKSCAN2Q63HK3 967 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 INTS3Q68E01 1043 aaKnown RBP12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 MPNDQ8N594 471 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 JARID2Q92833 1246 aaPredicted RBP12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 SEC31BQ9NQW1 1179 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 BSDC1Q9NW68 430 aaPredicted RBP12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 PODXL2Q9NZ53 605 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 KDM2BQ8NHM5 1336 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 COL4A1P02462 1669 aa12.32□□□□□ -0.44
SNRPCP16-201ENST00000506029 DICER1Q9UPY3 1922 aaKnown RBP12.31□□□□□ -0.44
SNRPCP16-201ENST00000506029 BCAR3O75815 825 aa12.31□□□□□ -0.44
SNRPCP16-201ENST00000506029 NBPF7P0C2Y1 421 aaPredicted RBP12.31□□□□□ -0.44
SNRPCP16-201ENST00000506029 IGHMBP2P38935 993 aaKnown RBP12.31□□□□□ -0.44
SNRPCP16-201ENST00000506029 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
SNRPCP16-201ENST00000506029 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
SNRPCP16-201ENST00000506029 GPBP1L1Q9HC44 474 aaPredicted RBP12.31□□□□□ -0.44
SNRPCP16-201ENST00000506029 ZNF277Q9NRM2 450 aaPredicted RBP12.31□□□□□ -0.44
SNRPCP16-201ENST00000506029 ANKRD18BA2A2Z9 1011 aa12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 KIAA2012Q0VF49 1180 aa12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 JDP2Q8WYK2 163 aa12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 FRAT1Q92837 279 aaPredicted RBP12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 EYA3Q99504 573 aa12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 XDHP47989 1333 aa12.3□□□□□ -0.44
SNRPCP16-201ENST00000506029 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
SNRPCP16-201ENST00000506029 FZD9O00144 591 aa12.29□□□□□ -0.44
SNRPCP16-201ENST00000506029 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
SNRPCP16-201ENST00000506029 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
SNRPCP16-201ENST00000506029 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
SNRPCP16-201ENST00000506029 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
SNRPCP16-201ENST00000506029 LARGE2Q8N3Y3 721 aa12.29□□□□□ -0.44
SNRPCP16-201ENST00000506029 MPHOSPH8Q99549 860 aa12.29□□□□□ -0.44
SNRPCP16-201ENST00000506029 PPIP5K2O43314 1243 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 GNAI3P08754 354 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 MS4A1P11836 297 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 GPSM2P81274 684 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 EPHA10Q5JZY3 1008 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 SLC51AQ86UW1 340 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 FTSJ3Q8IY81 847 aaKnown RBP12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 KAZALD1Q96I82 304 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 ANKRD2Q9GZV1 360 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 BICC1Q9H694 974 aaKnown RBP12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 NSFL1CQ9UNZ2 370 aaKnown RBP12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
SNRPCP16-201ENST00000506029 COL4A5P29400 1685 aa12.27□□□□□ -0.45
SNRPCP16-201ENST00000506029 ATP2B4P23634 1241 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms