RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	GRAP	Q13588	217 aa		13.41	□□□□□ -0.26
NR1I3-222	ENST00000506018	C3orf67	Q6ZVT6	689 aa		13.41	□□□□□ -0.26
NR1I3-222	ENST00000506018	PNMA8A	Q86V59	439 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1I3-222	ENST00000506018	SP8	Q8IXZ3	490 aa		13.41	□□□□□ -0.26
NR1I3-222	ENST00000506018	NIM1K	Q8IY84	436 aa		13.41	□□□□□ -0.26
NR1I3-222	ENST00000506018	GRAPL	Q8TC17	118 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1I3-222	ENST00000506018	SNED1	Q8TER0	1413 aa		13.41	□□□□□ -0.26
NR1I3-222	ENST00000506018	IL16	Q14005	1332 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	ZNF541	Q9H0D2	1346 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	PPIP5K2	O43314	1243 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	TAF1	P21675	1872 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	DSG3	P32926	999 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	CCDC184	Q52MB2	194 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	DPP8	Q6V1X1	898 aa	Predicted RBP	13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	LDHD	Q86WU2	507 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	WWC1	Q8IX03	1113 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	MPND	Q8N594	471 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	C8orf58	Q8NAV2	365 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	FAM89A	Q96GI7	184 aa		13.4	□□□□□ -0.26
NR1I3-222	ENST00000506018	EAPP	Q56P03	285 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1I3-222	ENST00000506018	KLRG1	Q96E93	195 aa		13.39	□□□□□ -0.27
NR1I3-222	ENST00000506018	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1I3-222	ENST00000506018	PHAX	Q9H814	394 aa	Known RBP	13.39	□□□□□ -0.27
NR1I3-222	ENST00000506018	CLEC11A	Q9Y240	323 aa		13.39	□□□□□ -0.27
NR1I3-222	ENST00000506018	GJA3	Q9Y6H8	435 aa		13.39	□□□□□ -0.27
NR1I3-222	ENST00000506018	IRS4	O14654	1257 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1I3-222	ENST00000506018	EPHX2	P34913	555 aa		13.38	□□□□□ -0.27
NR1I3-222	ENST00000506018	NEXN	Q0ZGT2	675 aa		13.38	□□□□□ -0.27
NR1I3-222	ENST00000506018	SF3B3	Q15393	1217 aa	Known RBP	13.38	□□□□□ -0.27
NR1I3-222	ENST00000506018	DNAJC5G	Q8N7S2	189 aa		13.38	□□□□□ -0.27
NR1I3-222	ENST00000506018	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1I3-222	ENST00000506018	CCDC191	Q8NCU4	936 aa		13.38	□□□□□ -0.27
NR1I3-222	ENST00000506018	MYD88	Q99836	296 aa		13.38	□□□□□ -0.27
NR1I3-222	ENST00000506018	LRRC37A	A6NMS7	1700 aa		13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	POLA2	Q14181	598 aa		13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	AOC3	Q16853	763 aa		13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	TWISTNB	Q3B726	338 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	RTL5	Q5HYW3	569 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	TSR2	Q969E8	191 aa	Known RBP	13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	METTL22	Q9BUU2	404 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	CWC25	Q9NXE8	425 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	MYH3	P11055	1940 aa		13.37	□□□□□ -0.27
NR1I3-222	ENST00000506018	WDR63	Q8IWG1	891 aa		13.36	□□□□□ -0.27
NR1I3-222	ENST00000506018	ZNF428	Q96B54	188 aa		13.36	□□□□□ -0.27
NR1I3-222	ENST00000506018	ZNRF3	Q9ULT6	936 aa		13.36	□□□□□ -0.27
NR1I3-222	ENST00000506018	PCCA	P05165	728 aa	Predicted RBP	13.35	□□□□□ -0.27
NR1I3-222	ENST00000506018	HTRA3	P83110	453 aa		13.35	□□□□□ -0.27
NR1I3-222	ENST00000506018	CCDC152	Q4G0S7	254 aa		13.35	□□□□□ -0.27
NR1I3-222	ENST00000506018	KSR2	Q6VAB6	950 aa		13.35	□□□□□ -0.27
NR1I3-222	ENST00000506018	TSPYL6	Q8N831	410 aa		13.35	□□□□□ -0.27
NR1I3-222	ENST00000506018	MAP3K2	Q9Y2U5	619 aa		13.35	□□□□□ -0.27
NR1I3-222	ENST00000506018	PDE8A	O60658	829 aa		13.34	□□□□□ -0.27
NR1I3-222	ENST00000506018	POTEI	P0CG38	1075 aa		13.34	□□□□□ -0.27
NR1I3-222	ENST00000506018	POTEJ	P0CG39	1038 aa		13.34	□□□□□ -0.27
NR1I3-222	ENST00000506018	KIAA2012	Q0VF49	1180 aa		13.34	□□□□□ -0.27
NR1I3-222	ENST00000506018	TNIP1	Q15025	636 aa		13.34	□□□□□ -0.27
NR1I3-222	ENST00000506018	EYA3	Q99504	573 aa		13.34	□□□□□ -0.27
NR1I3-222	ENST00000506018	CREBZF	Q9NS37	354 aa		13.34	□□□□□ -0.27
NR1I3-222	ENST00000506018	SALL2	Q9Y467	1007 aa	Predicted RBP	13.34	□□□□□ -0.27
NR1I3-222	ENST00000506018	PI4KAP2	A4QPH2	592 aa		13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	ABCB7	O75027	752 aa		13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	RPS8	P62241	208 aa	Known RBP	13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	WASHC4	Q2M389	1173 aa		13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	FAM9B	Q8IZU0	186 aa		13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	PI4KAP1	Q8N8J0	262 aa		13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	CELF1	Q92879	486 aa	Known RBP	13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	MYH16	Q9H6N6	1097 aa		13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.33	□□□□□ -0.27
NR1I3-222	ENST00000506018	COL4A5	P29400	1685 aa		13.33	□□□□□ -0.28
NR1I3-222	ENST00000506018	ADAMTSL1	Q8N6G6	1762 aa		13.33	□□□□□ -0.28
NR1I3-222	ENST00000506018	C6orf229	H3BNL8	230 aa		13.32	□□□□□ -0.28
NR1I3-222	ENST00000506018	CIAPIN1	Q6FI81	312 aa		13.32	□□□□□ -0.28
NR1I3-222	ENST00000506018	USP50	Q70EL3	339 aa	Predicted RBP	13.32	□□□□□ -0.28
NR1I3-222	ENST00000506018	JMY	Q8N9B5	988 aa		13.32	□□□□□ -0.28
NR1I3-222	ENST00000506018	BCL2L13	Q9BXK5	485 aa		13.32	□□□□□ -0.28
NR1I3-222	ENST00000506018	CDHR2	Q9BYE9	1310 aa		13.32	□□□□□ -0.28
NR1I3-222	ENST00000506018	FANCI	Q9NVI1	1328 aa		13.32	□□□□□ -0.28
NR1I3-222	ENST00000506018	CNTROB	Q8N137	903 aa		13.32	□□□□□ -0.28
NR1I3-222	ENST00000506018	PASK	Q96RG2	1323 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	TMEM88B	A6NKF7	163 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018		G3V3G9	751 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	SCNN1D	P51172	638 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	CXCL9	Q07325	125 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	FLII	Q13045	1269 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	FKBP5	Q13451	457 aa	Predicted RBP	13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	DCAF8	Q5TAQ9	597 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	ANKRD18A	Q8IVF6	992 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	CDC5L	Q99459	802 aa	Known RBP	13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	ADARB2	Q9NS39	739 aa	Known RBP	13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	ANKIB1	Q9P2G1	1089 aa		13.31	□□□□□ -0.28
NR1I3-222	ENST00000506018	TRPM7	Q96QT4	1865 aa		13.3	□□□□□ -0.28
NR1I3-222	ENST00000506018	EPS15	P42566	896 aa		13.3	□□□□□ -0.28
NR1I3-222	ENST00000506018	SLC51A	Q86UW1	340 aa		13.3	□□□□□ -0.28
NR1I3-222	ENST00000506018	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.3	□□□□□ -0.28
NR1I3-222	ENST00000506018	GPRC5D	Q9NZD1	345 aa		13.3	□□□□□ -0.28
NR1I3-222	ENST00000506018	LTBP1	Q14766	1721 aa		13.3	□□□□□ -0.28
NR1I3-222	ENST00000506018	DUOX1	Q9NRD9	1551 aa		13.29	□□□□□ -0.28
NR1I3-222	ENST00000506018	NEURL1B	A8MQ27	555 aa		13.29	□□□□□ -0.28
NR1I3-222	ENST00000506018	RAD17	O75943	681 aa		13.29	□□□□□ -0.28

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