RNA–Protein interactions for RNA: ENST00000505857.2

TOP1MT-202, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 1 (best)

Gene TOP1MT, Length 2,029 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-202ENST00000505857 CCDC24Q8N4L8 307 aa20.49■□□□□ 0.87
TOP1MT-202ENST00000505857 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
TOP1MT-202ENST00000505857 SLC4A3P48751 1232 aa20.48■□□□□ 0.87
TOP1MT-202ENST00000505857 PTPN12Q05209 780 aaKnown RBP20.48■□□□□ 0.87
TOP1MT-202ENST00000505857 SLC15A2Q16348 729 aa20.48■□□□□ 0.87
TOP1MT-202ENST00000505857 CHMP3Q9Y3E7 222 aa20.48■□□□□ 0.87
TOP1MT-202ENST00000505857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.48■□□□□ 0.87
TOP1MT-202ENST00000505857 TTLL11Q8NHH1 800 aa20.48■□□□□ 0.87
TOP1MT-202ENST00000505857 C3orf67Q6ZVT6 689 aa20.47■□□□□ 0.87
TOP1MT-202ENST00000505857 ZNF594Q96JF6 807 aaPredicted RBP20.47■□□□□ 0.87
TOP1MT-202ENST00000505857 ABCC12Q96J65 1359 aa20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 PDE8AO60658 829 aa20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 HMGB2P26583 209 aaKnown RBP20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 TM4SF1P30408 202 aa20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 CTSWP56202 376 aa20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 SIL1Q9H173 461 aa20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 OTUD7AQ8TE49 926 aaPredicted RBP20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 GREM2Q9H772 168 aa20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 MYH3P11055 1940 aa20.46■□□□□ 0.87
TOP1MT-202ENST00000505857 PDGFDQ9GZP0 370 aaPredicted RBP20.45■□□□□ 0.86
TOP1MT-202ENST00000505857 COPRSQ9NQ92 184 aa20.45■□□□□ 0.86
TOP1MT-202ENST00000505857 DDR1Q08345 913 aa20.44■□□□□ 0.86
TOP1MT-202ENST00000505857 CCDC125Q86Z20 511 aa20.44■□□□□ 0.86
TOP1MT-202ENST00000505857 SASH1O94885 1247 aa20.44■□□□□ 0.86
TOP1MT-202ENST00000505857 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
TOP1MT-202ENST00000505857 IL1RAPL2Q9NP60 686 aa20.44■□□□□ 0.86
TOP1MT-202ENST00000505857 STK32BQ9NY57 414 aa20.44■□□□□ 0.86
TOP1MT-202ENST00000505857 RHPN1Q8TCX5 695 aa20.43■□□□□ 0.86
TOP1MT-202ENST00000505857 UPF1Q92900 1129 aaKnown RBP eCLIP20.43■□□□□ 0.86
TOP1MT-202ENST00000505857 LRRCC1Q9C099 1032 aa20.43■□□□□ 0.86
TOP1MT-202ENST00000505857 LAMB2P55268 1798 aa20.43■□□□□ 0.86
TOP1MT-202ENST00000505857 SLC10A5Q5PT55 438 aa20.43■□□□□ 0.86
TOP1MT-202ENST00000505857 FLAD1Q8NFF5 587 aa20.43■□□□□ 0.86
TOP1MT-202ENST00000505857 PUS3Q9BZE2 481 aaKnown RBP20.43■□□□□ 0.86
TOP1MT-202ENST00000505857 COL4A1P02462 1669 aa20.42■□□□□ 0.86
TOP1MT-202ENST00000505857 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
TOP1MT-202ENST00000505857 RAB11FIP3O75154 756 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 NFKBIBQ15653 356 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 TPTE2Q6XPS3 522 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 CASZ1Q86V15 1759 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 ITGA6P23229 1130 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 LRRC24Q50LG9 513 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 MSL1Q68DK7 614 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 NYXQ9GZU5 481 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 SEC31BQ9NQW1 1179 aa20.41■□□□□ 0.86
TOP1MT-202ENST00000505857 SERPINB2P05120 415 aa20.4■□□□□ 0.86
TOP1MT-202ENST00000505857 OS9Q13438 667 aaPredicted RBP20.4■□□□□ 0.86
TOP1MT-202ENST00000505857 CCDC57Q2TAC2 916 aa20.4■□□□□ 0.86
TOP1MT-202ENST00000505857 PRR5LQ6MZQ0 368 aa20.4■□□□□ 0.86
TOP1MT-202ENST00000505857 G3BP1Q13283 466 aaKnown RBP eCLIP20.39■□□□□ 0.86
TOP1MT-202ENST00000505857 BMP2KLQ5H9B9 411 aa20.39■□□□□ 0.86
TOP1MT-202ENST00000505857 PLEKHM2Q8IWE5 1019 aa20.39■□□□□ 0.86
TOP1MT-202ENST00000505857 QSER1Q2KHR3 1735 aa20.39■□□□□ 0.85
TOP1MT-202ENST00000505857 TNRC6CQ9HCJ0 1690 aaKnown RBP20.39■□□□□ 0.85
TOP1MT-202ENST00000505857 IFIT5Q13325 482 aaKnown RBP20.39■□□□□ 0.85
TOP1MT-202ENST00000505857 KIF1BPQ96EK5 621 aa20.39■□□□□ 0.85
TOP1MT-202ENST00000505857 HSP90AB4PQ58FF6 505 aa20.38■□□□□ 0.85
TOP1MT-202ENST00000505857 NLGN1Q8N2Q7 840 aa20.38■□□□□ 0.85
TOP1MT-202ENST00000505857 TAF1P21675 1872 aa20.38■□□□□ 0.85
TOP1MT-202ENST00000505857 SALL3Q9BXA9 1300 aa20.38■□□□□ 0.85
TOP1MT-202ENST00000505857 C22orf23Q9BZE7 217 aa20.37■□□□□ 0.85
TOP1MT-202ENST00000505857 SF3B3Q15393 1217 aaKnown RBP20.37■□□□□ 0.85
TOP1MT-202ENST00000505857 CNBD1Q8NA66 436 aa20.37■□□□□ 0.85
TOP1MT-202ENST00000505857 ANKRD18BA2A2Z9 1011 aa20.36■□□□□ 0.85
TOP1MT-202ENST00000505857 EYA2O00167 538 aa20.36■□□□□ 0.85
TOP1MT-202ENST00000505857 TFCP2Q12800 502 aa20.36■□□□□ 0.85
TOP1MT-202ENST00000505857 TSHZ3Q63HK5 1081 aa20.36■□□□□ 0.85
TOP1MT-202ENST00000505857 MMP10P09238 476 aa20.35■□□□□ 0.85
TOP1MT-202ENST00000505857 CCDC152Q4G0S7 254 aa20.35■□□□□ 0.85
TOP1MT-202ENST00000505857 EAF2Q96CJ1 260 aaPredicted RBP20.35■□□□□ 0.85
TOP1MT-202ENST00000505857 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
TOP1MT-202ENST00000505857 ERC1Q8IUD2 1116 aa20.34■□□□□ 0.85
TOP1MT-202ENST00000505857 ILDR2Q71H61 639 aa20.34■□□□□ 0.85
TOP1MT-202ENST00000505857 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
TOP1MT-202ENST00000505857 RIPOR2Q9Y4F9 1068 aa20.34■□□□□ 0.85
TOP1MT-202ENST00000505857 RTL9Q8NET4 1388 aa20.34■□□□□ 0.85
TOP1MT-202ENST00000505857 NPHP1O15259 732 aa20.33■□□□□ 0.85
TOP1MT-202ENST00000505857 TAF7LQ5H9L4 462 aa20.33■□□□□ 0.85
TOP1MT-202ENST00000505857 NRXN2Q9P2S2 1712 aa20.33■□□□□ 0.84
TOP1MT-202ENST00000505857 CIAO1O76071 339 aa20.32■□□□□ 0.84
TOP1MT-202ENST00000505857 HSP90B1P14625 803 aaKnown RBP20.32■□□□□ 0.84
TOP1MT-202ENST00000505857 IL15P40933 162 aaPredicted RBP20.32■□□□□ 0.84
TOP1MT-202ENST00000505857 LDHAL6AQ6ZMR3 332 aa20.32■□□□□ 0.84
TOP1MT-202ENST00000505857 TBC1D2Q9BYX2 928 aa20.32■□□□□ 0.84
TOP1MT-202ENST00000505857 TLR7Q9NYK1 1049 aaKnown RBP20.32■□□□□ 0.84
TOP1MT-202ENST00000505857 PDE1AP54750 535 aa20.32■□□□□ 0.84
TOP1MT-202ENST00000505857 CCDC8Q9H0W5 538 aaPredicted RBP20.32■□□□□ 0.84
TOP1MT-202ENST00000505857 LRP5O75197 1615 aa20.31■□□□□ 0.84
TOP1MT-202ENST00000505857 SPEF2Q9C093 1822 aa20.31■□□□□ 0.84
TOP1MT-202ENST00000505857 EIF5BO60841 1220 aaKnown RBP20.31■□□□□ 0.84
TOP1MT-202ENST00000505857 CLASRPQ8N2M8 674 aaKnown RBP20.31■□□□□ 0.84
TOP1MT-202ENST00000505857 CELF1Q92879 486 aaKnown RBP20.31■□□□□ 0.84
TOP1MT-202ENST00000505857 GSPT1P15170 499 aaKnown RBP20.31■□□□□ 0.84
TOP1MT-202ENST00000505857 RBM25P49756 843 aaKnown RBP20.31■□□□□ 0.84
TOP1MT-202ENST00000505857 AACSQ86V21 672 aa20.31■□□□□ 0.84
TOP1MT-202ENST00000505857 RIC1Q4ADV7 1423 aa20.3■□□□□ 0.84
TOP1MT-202ENST00000505857 TNNI3KQ59H18 835 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms