RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 ISCA1Q9BUE6 129 aa32.01■■■□□ 2.71
HERC4-212ENST00000505760 RTFDC1Q9BY42 306 aaPredicted RBP32.01■■■□□ 2.71
HERC4-212ENST00000505760 DDX60Q8IY21 1712 aaKnown RBP32■■■□□ 2.71
HERC4-212ENST00000505760 SCNN1DP51172 638 aa32■■■□□ 2.71
HERC4-212ENST00000505760 LTBP1Q14766 1721 aa32■■■□□ 2.71
HERC4-212ENST00000505760 FAM89AQ96GI7 184 aa31.99■■■□□ 2.71
HERC4-212ENST00000505760 CNTNAP1P78357 1384 aa31.98■■■□□ 2.71
HERC4-212ENST00000505760 EPS15P42566 896 aa31.98■■■□□ 2.71
HERC4-212ENST00000505760 ZNRF3Q9ULT6 936 aa31.98■■■□□ 2.71
HERC4-212ENST00000505760 ELL2O00472 640 aaPredicted RBP31.97■■■□□ 2.71
HERC4-212ENST00000505760 TMC4Q7Z404 712 aa31.97■■■□□ 2.71
HERC4-212ENST00000505760 GOLGA2Q08379 1002 aa31.96■■■□□ 2.71
HERC4-212ENST00000505760 RIC3Q7Z5B4 369 aa31.96■■■□□ 2.71
HERC4-212ENST00000505760 RTL5Q5HYW3 569 aaPredicted RBP31.95■■■□□ 2.71
HERC4-212ENST00000505760 CXCL9Q07325 125 aa31.94■■■□□ 2.7
HERC4-212ENST00000505760 KIAA2012Q0VF49 1180 aa31.94■■■□□ 2.7
HERC4-212ENST00000505760 USP50Q70EL3 339 aaPredicted RBP31.94■■■□□ 2.7
HERC4-212ENST00000505760 TRIM28Q13263 835 aaKnown RBP31.93■■■□□ 2.7
HERC4-212ENST00000505760 SF3B3Q15393 1217 aaKnown RBP31.92■■■□□ 2.7
HERC4-212ENST00000505760 PHAXQ9H814 394 aaKnown RBP31.92■■■□□ 2.7
HERC4-212ENST00000505760 GPRC5DQ9NZD1 345 aa31.92■■■□□ 2.7
HERC4-212ENST00000505760 LRRC37AA6NMS7 1700 aa31.92■■■□□ 2.7
HERC4-212ENST00000505760 IRS4O14654 1257 aaPredicted RBP31.91■■■□□ 2.7
HERC4-212ENST00000505760 CIAPIN1Q6FI81 312 aa31.9■■■□□ 2.7
HERC4-212ENST00000505760 C8orf58Q8NAV2 365 aa31.9■■■□□ 2.7
HERC4-212ENST00000505760 CELF1Q92879 486 aaKnown RBP31.9■■■□□ 2.7
HERC4-212ENST00000505760 CHMP4AQ9BY43 222 aa31.9■■■□□ 2.7
HERC4-212ENST00000505760 ADARB2Q9NS39 739 aaKnown RBP31.9■■■□□ 2.7
HERC4-212ENST00000505760 VEGFBP49765 207 aa31.89■■■□□ 2.7
HERC4-212ENST00000505760 TNS4Q8IZW8 715 aa31.89■■■□□ 2.7
HERC4-212ENST00000505760 RAD17O75943 681 aa31.88■■■□□ 2.69
HERC4-212ENST00000505760 GMPSP49915 693 aaPredicted RBP31.88■■■□□ 2.69
HERC4-212ENST00000505760 TNIP1Q15025 636 aa31.88■■■□□ 2.69
HERC4-212ENST00000505760 DUOX1Q9NRD9 1551 aa31.87■■■□□ 2.69
HERC4-212ENST00000505760 ZBTB38Q8NAP3 1195 aaPredicted RBP31.87■■■□□ 2.69
HERC4-212ENST00000505760 MYD88Q99836 296 aa31.87■■■□□ 2.69
HERC4-212ENST00000505760 BCL2L13Q9BXK5 485 aa31.87■■■□□ 2.69
HERC4-212ENST00000505760 ABT1Q9ULW3 272 aaKnown RBP31.87■■■□□ 2.69
HERC4-212ENST00000505760 NSFL1CQ9UNZ2 370 aaKnown RBP31.87■■■□□ 2.69
HERC4-212ENST00000505760 HSP90B1P14625 803 aaKnown RBP31.86■■■□□ 2.69
HERC4-212ENST00000505760 DEFB115Q30KQ5 88 aa31.86■■■□□ 2.69
HERC4-212ENST00000505760 CCDC30Q5VVM6 783 aa31.86■■■□□ 2.69
HERC4-212ENST00000505760 RASSF10A6NK89 507 aa31.85■■■□□ 2.69
HERC4-212ENST00000505760 DDX58O95786 925 aaKnown RBP31.85■■■□□ 2.69
HERC4-212ENST00000505760 CDHR2Q9BYE9 1310 aa31.84■■■□□ 2.69
HERC4-212ENST00000505760 WASHC4Q2M389 1173 aa31.84■■■□□ 2.69
HERC4-212ENST00000505760 TRPM7Q96QT4 1865 aa31.84■■■□□ 2.69
HERC4-212ENST00000505760 C6orf229H3BNL8 230 aa31.83■■■□□ 2.69
HERC4-212ENST00000505760 CCDC184Q52MB2 194 aa31.83■■■□□ 2.69
HERC4-212ENST00000505760 CCDC191Q8NCU4 936 aa31.83■■■□□ 2.69
HERC4-212ENST00000505760 YDJCA8MPS7 323 aa31.82■■■□□ 2.68
HERC4-212ENST00000505760 RPS8P62241 208 aaKnown RBP31.82■■■□□ 2.68
HERC4-212ENST00000505760 COL4A1P02462 1669 aa31.81■■■□□ 2.68
HERC4-212ENST00000505760 GPSM2P81274 684 aa31.81■■■□□ 2.68
HERC4-212ENST00000505760 FMR1Q06787 632 aaKnown RBP eCLIP31.81■■■□□ 2.68
HERC4-212ENST00000505760 AIDAQ96BJ3 306 aa31.81■■■□□ 2.68
HERC4-212ENST00000505760 CWC25Q9NXE8 425 aaPredicted RBP31.81■■■□□ 2.68
HERC4-212ENST00000505760 TRAF5O00463 557 aa31.8■■■□□ 2.68
HERC4-212ENST00000505760 TSPYL6Q8N831 410 aa31.8■■■□□ 2.68
HERC4-212ENST00000505760 TSR2Q969E8 191 aaKnown RBP31.8■■■□□ 2.68
HERC4-212ENST00000505760 METTL22Q9BUU2 404 aaPredicted RBP31.8■■■□□ 2.68
HERC4-212ENST00000505760 RIMBP2O15034 1052 aa31.79■■■□□ 2.68
HERC4-212ENST00000505760 FOXN1O15353 648 aa31.79■■■□□ 2.68
HERC4-212ENST00000505760 PCCAP05165 728 aaPredicted RBP31.79■■■□□ 2.68
HERC4-212ENST00000505760 EYA3Q99504 573 aa31.79■■■□□ 2.68
HERC4-212ENST00000505760 POLLQ9UGP5 575 aa31.79■■■□□ 2.68
HERC4-212ENST00000505760 CCDC152Q4G0S7 254 aa31.78■■■□□ 2.68
HERC4-212ENST00000505760 DBNDD1Q9H9R9 158 aa31.78■■■□□ 2.68
HERC4-212ENST00000505760 CNOT7Q9UIV1 285 aaKnown RBP31.78■■■□□ 2.68
HERC4-212ENST00000505760 WDR33Q9C0J8 1336 aaKnown RBP31.77■■■□□ 2.68
HERC4-212ENST00000505760 CCDC27Q2M243 656 aa31.77■■■□□ 2.68
HERC4-212ENST00000505760 STK31Q9BXU1 1019 aa31.77■■■□□ 2.68
HERC4-212ENST00000505760 SEC31BQ9NQW1 1179 aa31.77■■■□□ 2.68
HERC4-212ENST00000505760 MAP3K2Q9Y2U5 619 aa31.77■■■□□ 2.68
HERC4-212ENST00000505760 H7C1D1 291 aa31.76■■■□□ 2.67
HERC4-212ENST00000505760 PDE8AO60658 829 aa31.76■■■□□ 2.67
HERC4-212ENST00000505760 CAPN15O75808 1086 aa31.76■■■□□ 2.67
HERC4-212ENST00000505760 PAXIP1Q6ZW49 1069 aaPredicted RBP31.76■■■□□ 2.67
HERC4-212ENST00000505760 WWC1Q8IX03 1113 aa31.76■■■□□ 2.67
HERC4-212ENST00000505760 JARID2Q92833 1246 aaPredicted RBP31.76■■■□□ 2.67
HERC4-212ENST00000505760 CST9Q5W186 159 aa31.75■■■□□ 2.67
HERC4-212ENST00000505760 TBC1D16Q8TBP0 767 aa31.75■■■□□ 2.67
HERC4-212ENST00000505760 PSMD14O00487 310 aa31.74■■■□□ 2.67
HERC4-212ENST00000505760 MICALL2Q8IY33 904 aa31.74■■■□□ 2.67
HERC4-212ENST00000505760 ZC3H15Q8WU90 426 aaKnown RBP31.74■■■□□ 2.67
HERC4-212ENST00000505760 ANKIB1Q9P2G1 1089 aa31.74■■■□□ 2.67
HERC4-212ENST00000505760 ZBTB12Q9Y330 459 aaPredicted RBP31.74■■■□□ 2.67
HERC4-212ENST00000505760 ECE2O60344 883 aa31.73■■■□□ 2.67
HERC4-212ENST00000505760 CTCFP49711 727 aaPredicted RBP31.73■■■□□ 2.67
HERC4-212ENST00000505760 HIRAP54198 1017 aaPredicted RBP31.73■■■□□ 2.67
HERC4-212ENST00000505760 DOK7Q18PE1 504 aa31.73■■■□□ 2.67
HERC4-212ENST00000505760 KSR2Q6VAB6 950 aa31.73■■■□□ 2.67
HERC4-212ENST00000505760 TRPM4Q8TD43 1214 aa31.73■■■□□ 2.67
HERC4-212ENST00000505760 CCDC85AQ96PX6 553 aaPredicted RBP31.73■■■□□ 2.67
HERC4-212ENST00000505760 GLIS2Q9BZE0 524 aaPredicted RBP31.73■■■□□ 2.67
HERC4-212ENST00000505760 WBP1LQ9NX94 342 aa31.73■■■□□ 2.67
HERC4-212ENST00000505760 PGAP2Q9UHJ9 254 aa31.73■■■□□ 2.67
HERC4-212ENST00000505760 SHTN1A0MZ66 631 aa31.72■■■□□ 2.67
HERC4-212ENST00000505760 PI4KAP2A4QPH2 592 aa31.72■■■□□ 2.67
HERC4-212ENST00000505760 ZEB1P37275 1124 aaPredicted RBP31.72■■■□□ 2.67
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