RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RGL4Q8IZJ4 473 aa7.32□□□□□ -1.24
CHD1-203ENST00000505657 MTMR7Q9Y216 660 aa7.32□□□□□ -1.24
CHD1-203ENST00000505657 GNEQ9Y223 722 aaKnown RBP7.32□□□□□ -1.24
CHD1-203ENST00000505657 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
CHD1-203ENST00000505657 PIK3R2O00459 728 aa7.31□□□□□ -1.24
CHD1-203ENST00000505657 EIF1AXP47813 144 aaKnown RBP7.31□□□□□ -1.24
CHD1-203ENST00000505657 DGKGP49619 791 aa7.31□□□□□ -1.24
CHD1-203ENST00000505657 FKBP4Q02790 459 aaKnown RBP eCLIP7.31□□□□□ -1.24
CHD1-203ENST00000505657 SPEM2Q0P670 501 aa7.31□□□□□ -1.24
CHD1-203ENST00000505657 TRIP4Q15650 581 aaPredicted RBP7.31□□□□□ -1.24
CHD1-203ENST00000505657 AEBP1Q8IUX7 1158 aa7.31□□□□□ -1.24
CHD1-203ENST00000505657 ABTB2Q8N961 1025 aa7.31□□□□□ -1.24
CHD1-203ENST00000505657 EGFL7Q9UHF1 273 aa7.31□□□□□ -1.24
CHD1-203ENST00000505657 KLF15Q9UIH9 416 aa7.31□□□□□ -1.24
CHD1-203ENST00000505657 RTCBQ9Y3I0 505 aaKnown RBP7.31□□□□□ -1.24
CHD1-203ENST00000505657 KCNMB2Q9Y691 235 aa7.31□□□□□ -1.24
CHD1-203ENST00000505657 NEURL1BA8MQ27 555 aa7.3□□□□□ -1.24
CHD1-203ENST00000505657 KCNA1Q09470 495 aa7.3□□□□□ -1.24
CHD1-203ENST00000505657 HOMEZQ8IX15 550 aa7.3□□□□□ -1.24
CHD1-203ENST00000505657 CCER1Q8TC90 406 aaPredicted RBP7.3□□□□□ -1.24
CHD1-203ENST00000505657 GPR152Q8TDT2 470 aa7.3□□□□□ -1.24
CHD1-203ENST00000505657 SOWAHDA6NJG2 315 aa7.29□□□□□ -1.24
CHD1-203ENST00000505657 PCBP4P57723 403 aaKnown RBP7.29□□□□□ -1.24
CHD1-203ENST00000505657 SF3B2Q13435 895 aaKnown RBP7.29□□□□□ -1.24
CHD1-203ENST00000505657 NOM1Q5C9Z4 860 aaKnown RBP7.29□□□□□ -1.24
CHD1-203ENST00000505657 ZMYM1Q5SVZ6 1142 aa7.29□□□□□ -1.24
CHD1-203ENST00000505657 CMTR1Q8N1G2 835 aaKnown RBP7.29□□□□□ -1.24
CHD1-203ENST00000505657 EDEM1Q92611 657 aa7.29□□□□□ -1.24
CHD1-203ENST00000505657 GSX2Q9BZM3 304 aa7.29□□□□□ -1.24
CHD1-203ENST00000505657 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
CHD1-203ENST00000505657 FZD6O60353 706 aa7.28□□□□□ -1.24
CHD1-203ENST00000505657 ARAFP10398 606 aa7.28□□□□□ -1.24
CHD1-203ENST00000505657 ARHGAP4P98171 946 aa7.28□□□□□ -1.24
CHD1-203ENST00000505657 ZNF468Q5VIY5 522 aaPredicted RBP7.28□□□□□ -1.24
CHD1-203ENST00000505657 KRT25Q7Z3Z0 450 aa7.28□□□□□ -1.24
CHD1-203ENST00000505657 GLYCTKQ8IVS8 523 aa7.28□□□□□ -1.24
CHD1-203ENST00000505657 CCDC87Q9NVE4 849 aa7.28□□□□□ -1.24
CHD1-203ENST00000505657 A6NHS1 94 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 FAM13AO94988 1023 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 PDGFAP04085 211 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 EPB42P16452 691 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 DNM1Q05193 864 aaKnown RBP7.27□□□□□ -1.25
CHD1-203ENST00000505657 SYT9Q86SS6 491 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 FCHSD1Q86WN1 690 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 KRTAP1-3Q8IUG1 177 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 BHMTQ93088 406 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 NUDT16Q96DE0 195 aaKnown RBP7.27□□□□□ -1.25
CHD1-203ENST00000505657 ZFATQ9P243 1243 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 PRR12Q9ULL5 1215 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 POLIQ9UNA4 740 aa7.27□□□□□ -1.25
CHD1-203ENST00000505657 XYLBO75191 536 aa7.26□□□□□ -1.25
CHD1-203ENST00000505657 SASH3O75995 380 aa7.26□□□□□ -1.25
CHD1-203ENST00000505657 NFKB1P19838 968 aa7.26□□□□□ -1.25
CHD1-203ENST00000505657 TARSP26639 723 aaKnown RBP7.26□□□□□ -1.25
CHD1-203ENST00000505657 GATA4P43694 442 aa7.26□□□□□ -1.25
CHD1-203ENST00000505657 CCINQ13939 588 aa7.26□□□□□ -1.25
CHD1-203ENST00000505657 CHSY3Q70JA7 882 aa7.26□□□□□ -1.25
CHD1-203ENST00000505657 PIK3R5Q8WYR1 880 aa7.25□□□□□ -1.25
CHD1-203ENST00000505657 GGNBP2Q9H3C7 697 aa7.25□□□□□ -1.25
CHD1-203ENST00000505657 UBAP1LF5GYI3 381 aa7.24□□□□□ -1.25
CHD1-203ENST00000505657 EGFRP00533 1210 aa7.24□□□□□ -1.25
CHD1-203ENST00000505657 ADH6P28332 368 aa7.24□□□□□ -1.25
CHD1-203ENST00000505657 AAMPQ13685 434 aa7.24□□□□□ -1.25
CHD1-203ENST00000505657 FOXD4L6Q3SYB3 417 aaPredicted RBP7.24□□□□□ -1.25
CHD1-203ENST00000505657 ALKBH2Q6NS38 261 aa7.24□□□□□ -1.25
CHD1-203ENST00000505657 FOXD4L3Q6VB84 417 aaPredicted RBP7.24□□□□□ -1.25
CHD1-203ENST00000505657 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
CHD1-203ENST00000505657 MDFIQ99750 246 aa7.24□□□□□ -1.25
CHD1-203ENST00000505657 PLVAPQ9BX97 442 aa7.24□□□□□ -1.25
CHD1-203ENST00000505657 AVENQ9NQS1 362 aaPredicted RBP7.24□□□□□ -1.25
CHD1-203ENST00000505657 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.24□□□□□ -1.25
CHD1-203ENST00000505657 MZF1P28698 734 aaPredicted RBP7.23□□□□□ -1.25
CHD1-203ENST00000505657 PNMA5Q96PV4 448 aa7.23□□□□□ -1.25
CHD1-203ENST00000505657 FAM13BQ9NYF5 915 aa7.23□□□□□ -1.25
CHD1-203ENST00000505657 SIN3BO75182 1162 aa7.22□□□□□ -1.25
CHD1-203ENST00000505657 RARAP10276 462 aa7.22□□□□□ -1.25
CHD1-203ENST00000505657 RSPO4Q2I0M5 234 aaPredicted RBP7.22□□□□□ -1.25
CHD1-203ENST00000505657 TMEM63CQ9P1W3 806 aa7.22□□□□□ -1.25
CHD1-203ENST00000505657 BIN2Q9UBW5 565 aaPredicted RBP7.22□□□□□ -1.25
CHD1-203ENST00000505657 SCO2A0A1W2PP80 73 aa7.21□□□□□ -1.26
CHD1-203ENST00000505657 MMP20O60882 483 aa7.21□□□□□ -1.26
CHD1-203ENST00000505657 TBC1D8BQ0IIM8 1120 aa7.21□□□□□ -1.26
CHD1-203ENST00000505657 GJD3Q8N144 294 aa7.21□□□□□ -1.26
CHD1-203ENST00000505657 TNFRSF25Q93038 417 aa7.21□□□□□ -1.26
CHD1-203ENST00000505657 IGFLR1Q9H665 355 aa7.21□□□□□ -1.26
CHD1-203ENST00000505657 C11orf16Q9NQ32 467 aa7.21□□□□□ -1.26
CHD1-203ENST00000505657 ZBTB42B2RXF5 422 aa7.2□□□□□ -1.26
CHD1-203ENST00000505657 C8orf34Q49A92 452 aa7.2□□□□□ -1.26
CHD1-203ENST00000505657 DHX32Q7L7V1 743 aaKnown RBP7.2□□□□□ -1.26
CHD1-203ENST00000505657 NLRP13Q86W25 1043 aa7.2□□□□□ -1.26
CHD1-203ENST00000505657 UBE2OQ9C0C9 1292 aaKnown RBP7.2□□□□□ -1.26
CHD1-203ENST00000505657 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.2□□□□□ -1.26
CHD1-203ENST00000505657 PATL2C9JE40 543 aaKnown RBP7.19□□□□□ -1.26
CHD1-203ENST00000505657 MAP3K6O95382 1288 aa7.19□□□□□ -1.26
CHD1-203ENST00000505657 CYP2E1P05181 493 aaPredicted RBP7.19□□□□□ -1.26
CHD1-203ENST00000505657 SPATA31C1P0DKV0 1188 aa7.19□□□□□ -1.26
CHD1-203ENST00000505657 ADH7P40394 386 aa7.19□□□□□ -1.26
CHD1-203ENST00000505657 MLLT1Q03111 559 aaPredicted RBP7.19□□□□□ -1.26
CHD1-203ENST00000505657 NEUROD1Q13562 356 aa7.19□□□□□ -1.26
CHD1-203ENST00000505657 NKAPLQ5M9Q1 402 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms