RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 DNAAF4Q8WXU2 420 aa16.77■□□□□ 0.28
ITGA3-206ENST00000505612 BBOX1O75936 387 aa16.76■□□□□ 0.27
ITGA3-206ENST00000505612 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
ITGA3-206ENST00000505612 GNAI3P08754 354 aa16.76■□□□□ 0.27
ITGA3-206ENST00000505612 RTKN2Q8IZC4 609 aa16.76■□□□□ 0.27
ITGA3-206ENST00000505612 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
ITGA3-206ENST00000505612 RBM19Q9Y4C8 960 aaKnown RBP16.76■□□□□ 0.27
ITGA3-206ENST00000505612 DDX46Q7L014 1031 aaKnown RBP16.75■□□□□ 0.27
ITGA3-206ENST00000505612 TMC4Q7Z404 712 aa16.75■□□□□ 0.27
ITGA3-206ENST00000505612 ANKRD44Q8N8A2 993 aa16.75■□□□□ 0.27
ITGA3-206ENST00000505612 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
ITGA3-206ENST00000505612 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
ITGA3-206ENST00000505612 C21orf2O43822 256 aa16.74■□□□□ 0.27
ITGA3-206ENST00000505612 HCLS1P14317 486 aaPredicted RBP16.74■□□□□ 0.27
ITGA3-206ENST00000505612 SF3B3Q15393 1217 aaKnown RBP16.74■□□□□ 0.27
ITGA3-206ENST00000505612 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
ITGA3-206ENST00000505612 ABCC12Q96J65 1359 aa16.74■□□□□ 0.27
ITGA3-206ENST00000505612 AFDNP55196 1824 aaKnown RBP16.73■□□□□ 0.27
ITGA3-206ENST00000505612 LMNB1P20700 586 aa16.73■□□□□ 0.27
ITGA3-206ENST00000505612 NEURL1BA8MQ27 555 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 F6X3S4 739 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 ALDH1L1O75891 902 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 IGKV5-2P06315 115 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 NUCB1Q02818 461 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 C7orf43Q8WVR3 580 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 HDAC5Q9UQL6 1122 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 ADCY9O60503 1353 aa16.72■□□□□ 0.27
ITGA3-206ENST00000505612 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
ITGA3-206ENST00000505612 NUP98P52948 1817 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 PDE8AO60658 829 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 HMMRO75330 724 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 PDE4AP27815 886 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 CCDC152Q4G0S7 254 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 SLC4A10Q6U841 1118 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 SIRT2Q8IXJ6 389 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 TAOK3Q9H2K8 898 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 DCTPP1Q9H773 170 aa16.71■□□□□ 0.27
ITGA3-206ENST00000505612 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 H7C1W4 665 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 GNAI2P04899 355 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 GCKRQ14397 625 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 BEND3Q5T5X7 828 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 C9orf131Q5VYM1 1079 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 MEIS3Q99687 375 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 SRCIN1Q9C0H9 1055 aa16.7■□□□□ 0.26
ITGA3-206ENST00000505612 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
ITGA3-206ENST00000505612 PPEF1O14829 653 aaPredicted RBP16.69■□□□□ 0.26
ITGA3-206ENST00000505612 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
ITGA3-206ENST00000505612 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
ITGA3-206ENST00000505612 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
ITGA3-206ENST00000505612 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
ITGA3-206ENST00000505612 ATP6V0A2Q9Y487 856 aa16.69■□□□□ 0.26
ITGA3-206ENST00000505612 KIAA1551Q9HCM1 1747 aa16.68■□□□□ 0.26
ITGA3-206ENST00000505612 FKBP4Q02790 459 aaKnown RBP eCLIP16.68■□□□□ 0.26
ITGA3-206ENST00000505612 GRAPQ13588 217 aa16.68■□□□□ 0.26
ITGA3-206ENST00000505612 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
ITGA3-206ENST00000505612 ZNF784Q8NCA9 323 aaPredicted RBP16.68■□□□□ 0.26
ITGA3-206ENST00000505612 GRAPLQ8TC17 118 aaPredicted RBP16.68■□□□□ 0.26
ITGA3-206ENST00000505612 USP44Q9H0E7 712 aa16.68■□□□□ 0.26
ITGA3-206ENST00000505612 VPS33BQ9H267 617 aa16.68■□□□□ 0.26
ITGA3-206ENST00000505612 NFKBIEO00221 500 aa16.67■□□□□ 0.26
ITGA3-206ENST00000505612 RGS3P49796 1198 aa16.67■□□□□ 0.26
ITGA3-206ENST00000505612 C3orf67Q6ZVT6 689 aa16.67■□□□□ 0.26
ITGA3-206ENST00000505612 CHD1LQ86WJ1 897 aa16.67■□□□□ 0.26
ITGA3-206ENST00000505612 SUPT20HQ8NEM7 779 aa16.67■□□□□ 0.26
ITGA3-206ENST00000505612 PSMD1Q99460 953 aa16.67■□□□□ 0.26
ITGA3-206ENST00000505612 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
ITGA3-206ENST00000505612 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
ITGA3-206ENST00000505612 UBE3BQ7Z3V4 1068 aa16.66■□□□□ 0.26
ITGA3-206ENST00000505612 PLA2G12BQ9BX93 195 aa16.66■□□□□ 0.26
ITGA3-206ENST00000505612 C1orf115Q9H7X2 142 aa16.66■□□□□ 0.26
ITGA3-206ENST00000505612 ATP8B2P98198 1209 aa16.65■□□□□ 0.26
ITGA3-206ENST00000505612 DPY19L2Q6NUT2 758 aa16.65■□□□□ 0.26
ITGA3-206ENST00000505612 CDC5LQ99459 802 aaKnown RBP16.65■□□□□ 0.26
ITGA3-206ENST00000505612 GPBP1L1Q9HC44 474 aaPredicted RBP16.65■□□□□ 0.26
ITGA3-206ENST00000505612 UTYO14607 1347 aa16.65■□□□□ 0.26
ITGA3-206ENST00000505612 GRM8O00222 908 aa16.64■□□□□ 0.25
ITGA3-206ENST00000505612 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.25
ITGA3-206ENST00000505612 CTSWP56202 376 aa16.64■□□□□ 0.25
ITGA3-206ENST00000505612 SKAP1Q86WV1 359 aa16.64■□□□□ 0.25
ITGA3-206ENST00000505612 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
ITGA3-206ENST00000505612 C8orf34Q49A92 452 aa16.63■□□□□ 0.25
ITGA3-206ENST00000505612 MPNDQ8N594 471 aa16.63■□□□□ 0.25
ITGA3-206ENST00000505612 TTLL11Q8NHH1 800 aa16.63■□□□□ 0.25
ITGA3-206ENST00000505612 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
ITGA3-206ENST00000505612 ARFGEF1Q9Y6D6 1849 aa16.62■□□□□ 0.25
ITGA3-206ENST00000505612 RASSF7Q02833 373 aa16.62■□□□□ 0.25
ITGA3-206ENST00000505612 DPP8Q6V1X1 898 aaPredicted RBP16.62■□□□□ 0.25
ITGA3-206ENST00000505612 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
ITGA3-206ENST00000505612 JARID2Q92833 1246 aaPredicted RBP16.62■□□□□ 0.25
ITGA3-206ENST00000505612 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
ITGA3-206ENST00000505612 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
ITGA3-206ENST00000505612 BRCA1P38398 1863 aaKnown RBP16.61■□□□□ 0.25
ITGA3-206ENST00000505612 CSF1RP07333 972 aa16.61■□□□□ 0.25
ITGA3-206ENST00000505612 MTX1Q13505 466 aa16.61■□□□□ 0.25
ITGA3-206ENST00000505612 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms