RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 NUP188Q5SRE5 1749 aa20.29■□□□□ 0.84
LIN54-204ENST00000505397 CASTP20810 708 aaKnown RBP20.29■□□□□ 0.84
LIN54-204ENST00000505397 EVI5LQ96CN4 794 aa20.29■□□□□ 0.84
LIN54-204ENST00000505397 CCDC39Q9UFE4 941 aa20.29■□□□□ 0.84
LIN54-204ENST00000505397 RNF214Q8ND24 703 aa20.28■□□□□ 0.84
LIN54-204ENST00000505397 KAZALD1Q96I82 304 aa20.28■□□□□ 0.84
LIN54-204ENST00000505397 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
LIN54-204ENST00000505397 SLIT2O94813 1529 aa20.28■□□□□ 0.84
LIN54-204ENST00000505397 NECTIN1Q15223 517 aa20.28■□□□□ 0.84
LIN54-204ENST00000505397 FOXD4L6Q3SYB3 417 aaPredicted RBP20.28■□□□□ 0.84
LIN54-204ENST00000505397 FOXD4L3Q6VB84 417 aaPredicted RBP20.28■□□□□ 0.84
LIN54-204ENST00000505397 GPATCH3Q96I76 525 aa20.28■□□□□ 0.84
LIN54-204ENST00000505397 SNRKQ9NRH2 765 aa20.28■□□□□ 0.84
LIN54-204ENST00000505397 PA2G4Q9UQ80 394 aaKnown RBP20.28■□□□□ 0.84
LIN54-204ENST00000505397 RRP9O43818 475 aaKnown RBP20.27■□□□□ 0.84
LIN54-204ENST00000505397 F13A1P00488 732 aa20.27■□□□□ 0.84
LIN54-204ENST00000505397 KLHL34Q8N239 644 aa20.27■□□□□ 0.84
LIN54-204ENST00000505397 CNPY2Q9Y2B0 182 aa20.27■□□□□ 0.84
LIN54-204ENST00000505397 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
LIN54-204ENST00000505397 LARGE1O95461 756 aa20.27■□□□□ 0.84
LIN54-204ENST00000505397 ADCK5Q3MIX3 580 aa20.27■□□□□ 0.84
LIN54-204ENST00000505397 SMC3Q9UQE7 1217 aa20.27■□□□□ 0.84
LIN54-204ENST00000505397 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.83
LIN54-204ENST00000505397 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.83
LIN54-204ENST00000505397 STARD3NLO95772 234 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 IFIT2P09913 472 aaKnown RBP20.26■□□□□ 0.83
LIN54-204ENST00000505397 TTLL7Q6ZT98 887 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 ZSCAN31Q96LW9 406 aaPredicted RBP20.26■□□□□ 0.83
LIN54-204ENST00000505397 CPA1P15085 419 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 UVSSAQ2YD98 709 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 CCDC183Q5T5S1 534 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 FAM184AQ8NB25 1140 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 LARP6Q9BRS8 491 aaKnown RBP20.26■□□□□ 0.83
LIN54-204ENST00000505397 SASH1O94885 1247 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 UBE2HP62256 183 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 DNAJC10Q8IXB1 793 aa20.26■□□□□ 0.83
LIN54-204ENST00000505397 SH2B1Q9NRF2 756 aaPredicted RBP20.26■□□□□ 0.83
LIN54-204ENST00000505397 ZNF330Q9Y3S2 320 aaPredicted RBP20.26■□□□□ 0.83
LIN54-204ENST00000505397 A0A087WZG4 1122 aa20.25■□□□□ 0.83
LIN54-204ENST00000505397 PRPF40BQ6NWY9 871 aaKnown RBP20.25■□□□□ 0.83
LIN54-204ENST00000505397 UBE3BQ7Z3V4 1068 aa20.25■□□□□ 0.83
LIN54-204ENST00000505397 PDRG1Q9NUG6 133 aa20.25■□□□□ 0.83
LIN54-204ENST00000505397 ATP6V1DQ9Y5K8 247 aa20.25■□□□□ 0.83
LIN54-204ENST00000505397 JCADQ9P266 1359 aa20.25■□□□□ 0.83
LIN54-204ENST00000505397 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
LIN54-204ENST00000505397 LETM1O95202 739 aaPredicted RBP20.24■□□□□ 0.83
LIN54-204ENST00000505397 AACSQ86V21 672 aa20.24■□□□□ 0.83
LIN54-204ENST00000505397 JAKMIP1Q96N16 626 aaKnown RBP20.24■□□□□ 0.83
LIN54-204ENST00000505397 ZBTB3Q9H5J0 574 aa20.24■□□□□ 0.83
LIN54-204ENST00000505397 CYP46A1Q9Y6A2 500 aa20.24■□□□□ 0.83
LIN54-204ENST00000505397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.24■□□□□ 0.83
LIN54-204ENST00000505397 A0A0G2JS52 829 aa20.24■□□□□ 0.83
LIN54-204ENST00000505397 ST3GAL1Q11201 340 aa20.24■□□□□ 0.83
LIN54-204ENST00000505397 MAP4K1Q92918 833 aa20.24■□□□□ 0.83
LIN54-204ENST00000505397 EAF2Q96CJ1 260 aaPredicted RBP20.23■□□□□ 0.83
LIN54-204ENST00000505397 MTMR6Q9Y217 621 aa20.23■□□□□ 0.83
LIN54-204ENST00000505397 HIP1O00291 1037 aa20.23■□□□□ 0.83
LIN54-204ENST00000505397 GJB2P29033 226 aa20.23■□□□□ 0.83
LIN54-204ENST00000505397 G3BP1Q13283 466 aaKnown RBP eCLIP20.23■□□□□ 0.83
LIN54-204ENST00000505397 HSP90AA2PQ14568 343 aaPredicted RBP20.22■□□□□ 0.83
LIN54-204ENST00000505397 BARGINQ6ZT62 677 aa20.22■□□□□ 0.83
LIN54-204ENST00000505397 CWC25Q9NXE8 425 aaPredicted RBP20.22■□□□□ 0.83
LIN54-204ENST00000505397 CCDC83Q8IWF9 413 aa20.22■□□□□ 0.83
LIN54-204ENST00000505397 COL15A1P39059 1388 aa20.21■□□□□ 0.83
LIN54-204ENST00000505397 KIF6Q6ZMV9 814 aa20.21■□□□□ 0.83
LIN54-204ENST00000505397 C8orf37Q96NL8 207 aa20.21■□□□□ 0.83
LIN54-204ENST00000505397 RBM8AQ9Y5S9 174 aaKnown RBP20.21■□□□□ 0.83
LIN54-204ENST00000505397 CREB3L3Q68CJ9 461 aa20.21■□□□□ 0.83
LIN54-204ENST00000505397 JARID2Q92833 1246 aaPredicted RBP20.21■□□□□ 0.83
LIN54-204ENST00000505397 NGLY1Q96IV0 654 aa20.21■□□□□ 0.83
LIN54-204ENST00000505397 ME3Q16798 604 aa20.2■□□□□ 0.82
LIN54-204ENST00000505397 CSPP1Q1MSJ5 1256 aa20.2■□□□□ 0.82
LIN54-204ENST00000505397 ZKSCAN1P17029 563 aaPredicted RBP20.2■□□□□ 0.82
LIN54-204ENST00000505397 FAM227BQ96M60 508 aa20.2■□□□□ 0.82
LIN54-204ENST00000505397 NMIQ13287 307 aaPredicted RBP20.19■□□□□ 0.82
LIN54-204ENST00000505397 EPHA10Q5JZY3 1008 aa20.19■□□□□ 0.82
LIN54-204ENST00000505397 CCDC191Q8NCU4 936 aa20.19■□□□□ 0.82
LIN54-204ENST00000505397 FUCA2Q9BTY2 467 aa20.19■□□□□ 0.82
LIN54-204ENST00000505397 TJP1Q07157 1748 aa20.19■□□□□ 0.82
LIN54-204ENST00000505397 ALDH8A1Q9H2A2 487 aaPredicted RBP20.19■□□□□ 0.82
LIN54-204ENST00000505397 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.19■□□□□ 0.82
LIN54-204ENST00000505397 SIL1Q9H173 461 aa20.18■□□□□ 0.82
LIN54-204ENST00000505397 PDIA4P13667 645 aaKnown RBP20.18■□□□□ 0.82
LIN54-204ENST00000505397 TPCN1Q9ULQ1 816 aa20.18■□□□□ 0.82
LIN54-204ENST00000505397 MED23Q9ULK4 1368 aa20.18■□□□□ 0.82
LIN54-204ENST00000505397 SLC27A2O14975 620 aa20.18■□□□□ 0.82
LIN54-204ENST00000505397 RABL6Q3YEC7 729 aaPredicted RBP20.18■□□□□ 0.82
LIN54-204ENST00000505397 MARCH10Q8NA82 808 aaPredicted RBP20.18■□□□□ 0.82
LIN54-204ENST00000505397 CCDC8Q9H0W5 538 aaPredicted RBP20.18■□□□□ 0.82
LIN54-204ENST00000505397 TLR7Q9NYK1 1049 aaKnown RBP20.18■□□□□ 0.82
LIN54-204ENST00000505397 FIBPO43427 364 aa20.17■□□□□ 0.82
LIN54-204ENST00000505397 DNM1Q05193 864 aaKnown RBP20.17■□□□□ 0.82
LIN54-204ENST00000505397 ACSBG1Q96GR2 724 aa20.17■□□□□ 0.82
LIN54-204ENST00000505397 H7C1W4 665 aa20.17■□□□□ 0.82
LIN54-204ENST00000505397 PSMA5P28066 241 aa20.17■□□□□ 0.82
LIN54-204ENST00000505397 CASP7P55210 303 aa20.17■□□□□ 0.82
LIN54-204ENST00000505397 CYP19A1P11511 503 aaPredicted RBP20.16■□□□□ 0.82
LIN54-204ENST00000505397 R3HCC1Q9Y3T6 440 aaKnown RBP20.16■□□□□ 0.82
LIN54-204ENST00000505397 A0A0D9SFI3 127 aa20.16■□□□□ 0.82
LIN54-204ENST00000505397 SLC4A9Q96Q91 983 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms