RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 GNAI3P08754 354 aa22.87■■□□□ 1.25
DDR1-254ENST00000504679 PDE3AQ14432 1141 aa22.87■■□□□ 1.25
DDR1-254ENST00000504679 TNRC6CQ9HCJ0 1690 aaKnown RBP22.87■■□□□ 1.25
DDR1-254ENST00000504679 BBOX1O75936 387 aa22.86■■□□□ 1.25
DDR1-254ENST00000504679 CSF1RP07333 972 aa22.86■■□□□ 1.25
DDR1-254ENST00000504679 UBTFL1P0CB47 393 aaPredicted RBP22.86■■□□□ 1.25
DDR1-254ENST00000504679 RLBP1P12271 317 aa22.86■■□□□ 1.25
DDR1-254ENST00000504679 PANK1Q8TE04 598 aa22.86■■□□□ 1.25
DDR1-254ENST00000504679 GRIN3BO60391 1043 aa22.85■■□□□ 1.25
DDR1-254ENST00000504679 FOXO4P98177 505 aa22.85■■□□□ 1.25
DDR1-254ENST00000504679 PRPF40BQ6NWY9 871 aaKnown RBP22.85■■□□□ 1.25
DDR1-254ENST00000504679 ITPRIPQ8IWB1 547 aa22.85■■□□□ 1.25
DDR1-254ENST00000504679 CCDC85AQ96PX6 553 aaPredicted RBP22.85■■□□□ 1.25
DDR1-254ENST00000504679 LAMB2P55268 1798 aa22.85■■□□□ 1.25
DDR1-254ENST00000504679 DLEC1Q9Y238 1755 aa22.85■■□□□ 1.25
DDR1-254ENST00000504679 SUCLG2Q96I99 432 aa22.84■■□□□ 1.25
DDR1-254ENST00000504679 TMX4Q9H1E5 349 aaPredicted RBP22.84■■□□□ 1.25
DDR1-254ENST00000504679 COL11A2P13942 1736 aaPredicted RBP22.84■■□□□ 1.25
DDR1-254ENST00000504679 BRCA1P38398 1863 aaKnown RBP22.83■■□□□ 1.25
DDR1-254ENST00000504679 YBX3P16989 372 aaKnown RBP eCLIP22.83■■□□□ 1.25
DDR1-254ENST00000504679 GRAPQ13588 217 aa22.83■■□□□ 1.25
DDR1-254ENST00000504679 LMBR1LQ6UX01 489 aa22.83■■□□□ 1.25
DDR1-254ENST00000504679 GRAPLQ8TC17 118 aaPredicted RBP22.83■■□□□ 1.25
DDR1-254ENST00000504679 MEIS3Q99687 375 aa22.83■■□□□ 1.25
DDR1-254ENST00000504679 MYH3P11055 1940 aa22.82■■□□□ 1.24
DDR1-254ENST00000504679 RRP1P56182 461 aaKnown RBP22.82■■□□□ 1.24
DDR1-254ENST00000504679 RPS8P62241 208 aaKnown RBP22.82■■□□□ 1.24
DDR1-254ENST00000504679 EPHA10Q5JZY3 1008 aa22.82■■□□□ 1.24
DDR1-254ENST00000504679 KAZALD1Q96I82 304 aa22.82■■□□□ 1.24
DDR1-254ENST00000504679 GREM2Q9H772 168 aa22.82■■□□□ 1.24
DDR1-254ENST00000504679 SEC31BQ9NQW1 1179 aa22.82■■□□□ 1.24
DDR1-254ENST00000504679 ZNF219Q9P2Y4 722 aaPredicted RBP22.82■■□□□ 1.24
DDR1-254ENST00000504679 CHMP3Q9Y3E7 222 aa22.82■■□□□ 1.24
DDR1-254ENST00000504679 ZBTB7BO15156 539 aaPredicted RBP22.81■■□□□ 1.24
DDR1-254ENST00000504679 C21orf2O43822 256 aa22.81■■□□□ 1.24
DDR1-254ENST00000504679 SOGA3Q5TF21 947 aa22.81■■□□□ 1.24
DDR1-254ENST00000504679 TMC4Q7Z404 712 aa22.81■■□□□ 1.24
DDR1-254ENST00000504679 CDC5LQ99459 802 aaKnown RBP22.81■■□□□ 1.24
DDR1-254ENST00000504679 CHMP4BQ9H444 224 aaKnown RBP22.81■■□□□ 1.24
DDR1-254ENST00000504679 BICC1Q9H694 974 aaKnown RBP22.81■■□□□ 1.24
DDR1-254ENST00000504679 SLX4Q8IY92 1834 aa22.8■■□□□ 1.24
DDR1-254ENST00000504679 RTL9Q8NET4 1388 aa22.8■■□□□ 1.24
DDR1-254ENST00000504679 ANKRD18BA2A2Z9 1011 aa22.8■■□□□ 1.24
DDR1-254ENST00000504679 PPEF1O14829 653 aaPredicted RBP22.8■■□□□ 1.24
DDR1-254ENST00000504679 IFIT5Q13325 482 aaKnown RBP22.8■■□□□ 1.24
DDR1-254ENST00000504679 MVPQ14764 893 aaKnown RBP22.8■■□□□ 1.24
DDR1-254ENST00000504679 CCDC57Q2TAC2 916 aa22.8■■□□□ 1.24
DDR1-254ENST00000504679 COG6Q9Y2V7 657 aa22.8■■□□□ 1.24
DDR1-254ENST00000504679 GNAI2P04899 355 aa22.79■■□□□ 1.24
DDR1-254ENST00000504679 ITGA6P23229 1130 aa22.79■■□□□ 1.24
DDR1-254ENST00000504679 CC2D2BQ6DHV5 1058 aa22.79■■□□□ 1.24
DDR1-254ENST00000504679 ARHGAP27Q6ZUM4 889 aa22.79■■□□□ 1.24
DDR1-254ENST00000504679 ANKRD18AQ8IVF6 992 aa22.79■■□□□ 1.24
DDR1-254ENST00000504679 C7orf43Q8WVR3 580 aa22.79■■□□□ 1.24
DDR1-254ENST00000504679 CELF1Q92879 486 aaKnown RBP22.79■■□□□ 1.24
DDR1-254ENST00000504679 DDX19BQ9UMR2 479 aa22.79■■□□□ 1.24
DDR1-254ENST00000504679 GOLGB1Q14789 3259 aaKnown RBP22.79■■□□□ 1.24
DDR1-254ENST00000504679 CACNA1SQ13698 1873 aa22.78■■□□□ 1.24
DDR1-254ENST00000504679 RABL6Q3YEC7 729 aaPredicted RBP22.78■■□□□ 1.24
DDR1-254ENST00000504679 GRIPAP1Q4V328 841 aa22.78■■□□□ 1.24
DDR1-254ENST00000504679 C20orf194Q5TEA3 1177 aa22.78■■□□□ 1.24
DDR1-254ENST00000504679 SP8Q8IXZ3 490 aa22.78■■□□□ 1.24
DDR1-254ENST00000504679 ATP6V0A2Q9Y487 856 aa22.78■■□□□ 1.24
DDR1-254ENST00000504679 LRRFIP2Q9Y608 721 aaKnown RBP22.78■■□□□ 1.24
DDR1-254ENST00000504679 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
DDR1-254ENST00000504679 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
DDR1-254ENST00000504679 ARFGEF1Q9Y6D6 1849 aa22.77■■□□□ 1.24
DDR1-254ENST00000504679 TAF1P21675 1872 aa22.77■■□□□ 1.24
DDR1-254ENST00000504679 IGHMBP2P38935 993 aaKnown RBP22.76■■□□□ 1.23
DDR1-254ENST00000504679 CCDC93Q567U6 631 aa22.76■■□□□ 1.23
DDR1-254ENST00000504679 TAF7LQ5H9L4 462 aa22.76■■□□□ 1.23
DDR1-254ENST00000504679 RTKN2Q8IZC4 609 aa22.76■■□□□ 1.23
DDR1-254ENST00000504679 ANKRD44Q8N8A2 993 aa22.76■■□□□ 1.23
DDR1-254ENST00000504679 MPHOSPH8Q99549 860 aa22.75■■□□□ 1.23
DDR1-254ENST00000504679 BSDC1Q9NW68 430 aaPredicted RBP22.74■■□□□ 1.23
DDR1-254ENST00000504679 OLFM4Q6UX06 510 aa22.72■■□□□ 1.23
DDR1-254ENST00000504679 LDHAL6AQ6ZMR3 332 aa22.71■■□□□ 1.23
DDR1-254ENST00000504679 MPNDQ8N594 471 aa22.71■■□□□ 1.23
DDR1-254ENST00000504679 ZNF594Q96JF6 807 aaPredicted RBP22.7■■□□□ 1.22
DDR1-254ENST00000504679 ZBTB40Q9NUA8 1239 aa22.7■■□□□ 1.22
DDR1-254ENST00000504679 DPP8Q6V1X1 898 aaPredicted RBP22.69■■□□□ 1.22
DDR1-254ENST00000504679 CNNM1Q9NRU3 951 aa22.69■■□□□ 1.22
DDR1-254ENST00000504679 NSFL1CQ9UNZ2 370 aaKnown RBP22.69■■□□□ 1.22
DDR1-254ENST00000504679 SRGAP3O43295 1099 aa22.68■■□□□ 1.22
DDR1-254ENST00000504679 ATP8B2P98198 1209 aa22.68■■□□□ 1.22
DDR1-254ENST00000504679 FKBP4Q02790 459 aaKnown RBP eCLIP22.68■■□□□ 1.22
DDR1-254ENST00000504679 MTX1Q13505 466 aa22.68■■□□□ 1.22
DDR1-254ENST00000504679 PSMD1Q99460 953 aa22.68■■□□□ 1.22
DDR1-254ENST00000504679 TAOK3Q9H2K8 898 aa22.68■■□□□ 1.22
DDR1-254ENST00000504679 C1orf115Q9H7X2 142 aa22.68■■□□□ 1.22
DDR1-254ENST00000504679 ANKIB1Q9P2G1 1089 aa22.68■■□□□ 1.22
DDR1-254ENST00000504679 MINPP1Q9UNW1 487 aa22.68■■□□□ 1.22
DDR1-254ENST00000504679 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
DDR1-254ENST00000504679 SUPT20HQ8NEM7 779 aa22.67■■□□□ 1.22
DDR1-254ENST00000504679 ANKRD2Q9GZV1 360 aa22.67■■□□□ 1.22
DDR1-254ENST00000504679 LTBP3Q9NS15 1303 aa22.66■■□□□ 1.22
DDR1-254ENST00000504679 NFKBIEO00221 500 aa22.66■■□□□ 1.22
DDR1-254ENST00000504679 RFX5P48382 616 aaPredicted RBP22.66■■□□□ 1.22
DDR1-254ENST00000504679 GPSM2P81274 684 aa22.66■■□□□ 1.22
DDR1-254ENST00000504679 FER1L6Q2WGJ9 1857 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms