RNA–Protein interactions for RNA: ENST00000504522.1

SH3RF2-203, Transcript of SH3 domain containing ring finger 2, humanhuman

TSL 3

Gene SH3RF2, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2-203ENST00000504522 TTLL6Q8N841 843 aa15.44■□□□□ 0.06
SH3RF2-203ENST00000504522 C7orf43Q8WVR3 580 aa15.44■□□□□ 0.06
SH3RF2-203ENST00000504522 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
SH3RF2-203ENST00000504522 H7C1W4 665 aa15.43■□□□□ 0.06
SH3RF2-203ENST00000504522 NPR1P16066 1061 aa15.43■□□□□ 0.06
SH3RF2-203ENST00000504522 CASP7P55210 303 aa15.43■□□□□ 0.06
SH3RF2-203ENST00000504522 GCKRQ14397 625 aa15.43■□□□□ 0.06
SH3RF2-203ENST00000504522 ZBTB40Q9NUA8 1239 aa15.43■□□□□ 0.06
SH3RF2-203ENST00000504522 C9orf78Q9NZ63 289 aaPredicted RBP15.43■□□□□ 0.06
SH3RF2-203ENST00000504522 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
SH3RF2-203ENST00000504522 TAF1P21675 1872 aa15.43■□□□□ 0.06
SH3RF2-203ENST00000504522 GRIN3BO60391 1043 aa15.42■□□□□ 0.06
SH3RF2-203ENST00000504522 GNAI2P04899 355 aa15.42■□□□□ 0.06
SH3RF2-203ENST00000504522 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
SH3RF2-203ENST00000504522 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
SH3RF2-203ENST00000504522 CDHR2Q9BYE9 1310 aa15.42■□□□□ 0.06
SH3RF2-203ENST00000504522 COL4A1P02462 1669 aa15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 MYH3P11055 1940 aa15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 GRM8O00222 908 aa15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 UBTFL1P0CB47 393 aaPredicted RBP15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 SF3B3Q15393 1217 aaKnown RBP15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 RTL5Q5HYW3 569 aaPredicted RBP15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 JARID2Q92833 1246 aaPredicted RBP15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 CNKSR1Q969H4 720 aa15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 ZNF622Q969S3 477 aaKnown RBP eCLIP15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 CCDC136Q96JN2 1154 aa15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 NLRP3Q96P20 1036 aa15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 SBF1O95248 1867 aa15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
SH3RF2-203ENST00000504522 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
SH3RF2-203ENST00000504522 IRS4O14654 1257 aaPredicted RBP15.4■□□□□ 0.06
SH3RF2-203ENST00000504522 PRPF40BQ6NWY9 871 aaKnown RBP15.4■□□□□ 0.06
SH3RF2-203ENST00000504522 CRAMP1Q96RY5 1269 aa15.4■□□□□ 0.06
SH3RF2-203ENST00000504522 UTYO14607 1347 aa15.4■□□□□ 0.06
SH3RF2-203ENST00000504522 ALDH1B1P30837 517 aa15.39■□□□□ 0.05
SH3RF2-203ENST00000504522 RPAP2Q8IXW5 612 aaPredicted RBP15.39■□□□□ 0.05
SH3RF2-203ENST00000504522 USP44Q9H0E7 712 aa15.39■□□□□ 0.05
SH3RF2-203ENST00000504522 MEIS3Q99687 375 aa15.38■□□□□ 0.05
SH3RF2-203ENST00000504522 PLA2G12BQ9BX93 195 aa15.38■□□□□ 0.05
SH3RF2-203ENST00000504522 RWDD1Q9H446 243 aaPredicted RBP15.38■□□□□ 0.05
SH3RF2-203ENST00000504522 PDE8AO60658 829 aa15.37■□□□□ 0.05
SH3RF2-203ENST00000504522 HMMRO75330 724 aa15.37■□□□□ 0.05
SH3RF2-203ENST00000504522 PRELPP51888 382 aa15.37■□□□□ 0.05
SH3RF2-203ENST00000504522 UBE3BQ7Z3V4 1068 aa15.37■□□□□ 0.05
SH3RF2-203ENST00000504522 SLC51AQ86UW1 340 aa15.37■□□□□ 0.05
SH3RF2-203ENST00000504522 RBM17Q96I25 401 aaKnown RBP15.37■□□□□ 0.05
SH3RF2-203ENST00000504522 CCDC88AQ3V6T2 1871 aa15.36■□□□□ 0.05
SH3RF2-203ENST00000504522 C21orf2O43822 256 aa15.36■□□□□ 0.05
SH3RF2-203ENST00000504522 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
SH3RF2-203ENST00000504522 TTLL11Q8NHH1 800 aa15.36■□□□□ 0.05
SH3RF2-203ENST00000504522 RPGRQ92834 1020 aaKnown RBP15.36■□□□□ 0.05
SH3RF2-203ENST00000504522 LRRC37AA6NMS7 1700 aa15.36■□□□□ 0.05
SH3RF2-203ENST00000504522 NFKBIEO00221 500 aa15.35■□□□□ 0.05
SH3RF2-203ENST00000504522 CSF1RP07333 972 aa15.35■□□□□ 0.05
SH3RF2-203ENST00000504522 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
SH3RF2-203ENST00000504522 KAZALD1Q96I82 304 aa15.35■□□□□ 0.05
SH3RF2-203ENST00000504522 NBPF7P0C2Y1 421 aaPredicted RBP15.34■□□□□ 0.05
SH3RF2-203ENST00000504522 FOXO4P98177 505 aa15.34■□□□□ 0.05
SH3RF2-203ENST00000504522 ARHGAP27Q6ZUM4 889 aa15.34■□□□□ 0.05
SH3RF2-203ENST00000504522 ANKRD44Q8N8A2 993 aa15.34■□□□□ 0.05
SH3RF2-203ENST00000504522 RTL9Q8NET4 1388 aa15.34■□□□□ 0.05
SH3RF2-203ENST00000504522 DICER1Q9UPY3 1922 aaKnown RBP15.33■□□□□ 0.05
SH3RF2-203ENST00000504522 BBOX1O75936 387 aa15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 CTSWP56202 376 aa15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 GRAPQ13588 217 aa15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 EPHA10Q5JZY3 1008 aa15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 CENPQQ7L2Z9 268 aaPredicted RBP15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 CELF1Q92879 486 aaKnown RBP15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 SEC31BQ9NQW1 1179 aa15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 LTBP1Q14766 1721 aa15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 LTBP3Q9NS15 1303 aa15.33■□□□□ 0.04
SH3RF2-203ENST00000504522 MTX1Q13505 466 aa15.32■□□□□ 0.04
SH3RF2-203ENST00000504522 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
SH3RF2-203ENST00000504522 ATP6V0A2Q9Y487 856 aa15.32■□□□□ 0.04
SH3RF2-203ENST00000504522 PCDHB15Q9Y5E8 787 aa15.32■□□□□ 0.04
SH3RF2-203ENST00000504522 PPEF1O14829 653 aaPredicted RBP15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 RASSF7Q02833 373 aa15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 SOGA3Q5TF21 947 aa15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 SP8Q8IXZ3 490 aa15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 GCC1Q96CN9 775 aa15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 GREM2Q9H772 168 aa15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
SH3RF2-203ENST00000504522 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
SH3RF2-203ENST00000504522 CCDC93Q567U6 631 aa15.3■□□□□ 0.04
SH3RF2-203ENST00000504522 CC2D2BQ6DHV5 1058 aa15.3■□□□□ 0.04
SH3RF2-203ENST00000504522 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
SH3RF2-203ENST00000504522 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
SH3RF2-203ENST00000504522 DUOX1Q9NRD9 1551 aa15.3■□□□□ 0.04
SH3RF2-203ENST00000504522 RABL6Q3YEC7 729 aaPredicted RBP15.29■□□□□ 0.04
SH3RF2-203ENST00000504522 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
SH3RF2-203ENST00000504522 TMC4Q7Z404 712 aa15.29■□□□□ 0.04
SH3RF2-203ENST00000504522 RTKN2Q8IZC4 609 aa15.29■□□□□ 0.04
SH3RF2-203ENST00000504522 CCDC85AQ96PX6 553 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms