RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 PHAXQ9H814 394 aaKnown RBP16■□□□□ 0.15
PDGFRA-204ENST00000504461 CACNA1FO60840 1977 aa15.99■□□□□ 0.15
PDGFRA-204ENST00000504461 LMOD1P29536 600 aaPredicted RBP15.99■□□□□ 0.15
PDGFRA-204ENST00000504461 GRAPQ13588 217 aa15.99■□□□□ 0.15
PDGFRA-204ENST00000504461 SLC51AQ86UW1 340 aa15.99■□□□□ 0.15
PDGFRA-204ENST00000504461 MPNDQ8N594 471 aa15.99■□□□□ 0.15
PDGFRA-204ENST00000504461 GRAPLQ8TC17 118 aaPredicted RBP15.99■□□□□ 0.15
PDGFRA-204ENST00000504461 COL4A5P29400 1685 aa15.99■□□□□ 0.15
PDGFRA-204ENST00000504461 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
PDGFRA-204ENST00000504461 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
PDGFRA-204ENST00000504461 AOC3Q16853 763 aa15.98■□□□□ 0.15
PDGFRA-204ENST00000504461 TMC4Q7Z404 712 aa15.98■□□□□ 0.15
PDGFRA-204ENST00000504461 HSP90B1P14625 803 aaKnown RBP15.97■□□□□ 0.15
PDGFRA-204ENST00000504461 JMYQ8N9B5 988 aa15.97■□□□□ 0.15
PDGFRA-204ENST00000504461 MYD88Q99836 296 aa15.97■□□□□ 0.15
PDGFRA-204ENST00000504461 ADAMTSL1Q8N6G6 1762 aa15.97■□□□□ 0.15
PDGFRA-204ENST00000504461 LRRC37AA6NMS7 1700 aa15.97■□□□□ 0.15
PDGFRA-204ENST00000504461 MYH3P11055 1940 aa15.96■□□□□ 0.15
PDGFRA-204ENST00000504461 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
PDGFRA-204ENST00000504461 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.15
PDGFRA-204ENST00000504461 WWC1Q8IX03 1113 aa15.96■□□□□ 0.15
PDGFRA-204ENST00000504461 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.15
PDGFRA-204ENST00000504461 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
PDGFRA-204ENST00000504461 RTFDC1Q9BY42 306 aaPredicted RBP15.96■□□□□ 0.15
PDGFRA-204ENST00000504461 CREBZFQ9NS37 354 aa15.96■□□□□ 0.15
PDGFRA-204ENST00000504461 TSPYL6Q8N831 410 aa15.95■□□□□ 0.14
PDGFRA-204ENST00000504461 ZBTB38Q8NAP3 1195 aaPredicted RBP15.95■□□□□ 0.14
PDGFRA-204ENST00000504461 ZNRF3Q9ULT6 936 aa15.95■□□□□ 0.14
PDGFRA-204ENST00000504461 LTBP1Q14766 1721 aa15.94■□□□□ 0.14
PDGFRA-204ENST00000504461 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
PDGFRA-204ENST00000504461 METTL22Q9BUU2 404 aaPredicted RBP15.94■□□□□ 0.14
PDGFRA-204ENST00000504461 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
PDGFRA-204ENST00000504461 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
PDGFRA-204ENST00000504461 TRPM7Q96QT4 1865 aa15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 KIAA2012Q0VF49 1180 aa15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 TWISTNBQ3B726 338 aaPredicted RBP15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 MAP1SQ66K74 1059 aaPredicted RBP15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 WDR63Q8IWG1 891 aa15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 CNTROBQ8N137 903 aa15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 CELF1Q92879 486 aaKnown RBP15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 SALL2Q9Y467 1007 aaPredicted RBP15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 IL16Q14005 1332 aa15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 PASKQ96RG2 1323 aa15.93■□□□□ 0.14
PDGFRA-204ENST00000504461 SPEF2Q9C093 1822 aa15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 ITGBL1O95965 494 aaPredicted RBP15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 PCCAP05165 728 aaPredicted RBP15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 EPS15P42566 896 aa15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 SCNN1DP51172 638 aa15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 RPS8P62241 208 aaKnown RBP15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 CXCL9Q07325 125 aa15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 NEXNQ0ZGT2 675 aa15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 TNIP1Q15025 636 aa15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 IFFO2Q5TF58 517 aa15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 KSR2Q6VAB6 950 aa15.92■□□□□ 0.14
PDGFRA-204ENST00000504461 TMEM88BA6NKF7 163 aa15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 PDE8AO60658 829 aa15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 WASHC4Q2M389 1173 aa15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 CIAPIN1Q6FI81 312 aa15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 USP50Q70EL3 339 aaPredicted RBP15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 BCL2L13Q9BXK5 485 aa15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 MKRN1Q9UHC7 482 aaKnown RBP15.91■□□□□ 0.14
PDGFRA-204ENST00000504461 PI4KAP2A4QPH2 592 aa15.9■□□□□ 0.14
PDGFRA-204ENST00000504461 RAD17O75943 681 aa15.9■□□□□ 0.14
PDGFRA-204ENST00000504461 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
PDGFRA-204ENST00000504461 CCDC152Q4G0S7 254 aa15.9■□□□□ 0.14
PDGFRA-204ENST00000504461 PI4KAP1Q8N8J0 262 aa15.9■□□□□ 0.14
PDGFRA-204ENST00000504461 EYA3Q99504 573 aa15.9■□□□□ 0.14
PDGFRA-204ENST00000504461 GPRC5DQ9NZD1 345 aa15.9■□□□□ 0.14
PDGFRA-204ENST00000504461 DUOX1Q9NRD9 1551 aa15.89■□□□□ 0.13
PDGFRA-204ENST00000504461 RIMBP2O15034 1052 aa15.89■□□□□ 0.13
PDGFRA-204ENST00000504461 GPSM2P81274 684 aa15.89■□□□□ 0.13
PDGFRA-204ENST00000504461 ADARB2Q9NS39 739 aaKnown RBP15.89■□□□□ 0.13
PDGFRA-204ENST00000504461 COL4A1P02462 1669 aa15.89■□□□□ 0.13
PDGFRA-204ENST00000504461 G3V3G9 751 aa15.88■□□□□ 0.13
PDGFRA-204ENST00000504461 GMPSP49915 693 aaPredicted RBP15.88■□□□□ 0.13
PDGFRA-204ENST00000504461 DCAF8Q5TAQ9 597 aa15.88■□□□□ 0.13
PDGFRA-204ENST00000504461 CCDC85AQ96PX6 553 aaPredicted RBP15.88■□□□□ 0.13
PDGFRA-204ENST00000504461 SEC31BQ9NQW1 1179 aa15.88■□□□□ 0.13
PDGFRA-204ENST00000504461 ZC3H12CQ9C0D7 883 aaKnown RBP15.87■□□□□ 0.13
PDGFRA-204ENST00000504461 ANKIB1Q9P2G1 1089 aa15.87■□□□□ 0.13
PDGFRA-204ENST00000504461 POLLQ9UGP5 575 aa15.87■□□□□ 0.13
PDGFRA-204ENST00000504461 POLR2AP24928 1970 aaKnown RBP15.87■□□□□ 0.13
PDGFRA-204ENST00000504461 CDHR2Q9BYE9 1310 aa15.87■□□□□ 0.13
PDGFRA-204ENST00000504461 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
PDGFRA-204ENST00000504461 CNTNAP1P78357 1384 aa15.87■□□□□ 0.13
PDGFRA-204ENST00000504461 YDJCA8MPS7 323 aa15.86■□□□□ 0.13
PDGFRA-204ENST00000504461 IGKV5-2P06315 115 aa15.86■□□□□ 0.13
PDGFRA-204ENST00000504461 HSPA1AP0DMV8 641 aaKnown RBP15.86■□□□□ 0.13
PDGFRA-204ENST00000504461 HSPA1BP0DMV9 641 aaKnown RBP15.86■□□□□ 0.13
PDGFRA-204ENST00000504461 G2E3Q7L622 706 aa15.86■□□□□ 0.13
PDGFRA-204ENST00000504461 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
PDGFRA-204ENST00000504461 DBNDD1Q9H9R9 158 aa15.86■□□□□ 0.13
PDGFRA-204ENST00000504461 ABT1Q9ULW3 272 aaKnown RBP15.86■□□□□ 0.13
PDGFRA-204ENST00000504461 H7C1D1 291 aa15.85■□□□□ 0.13
PDGFRA-204ENST00000504461 DOK7Q18PE1 504 aa15.85■□□□□ 0.13
PDGFRA-204ENST00000504461 CWF19L2Q2TBE0 894 aaKnown RBP15.85■□□□□ 0.13
PDGFRA-204ENST00000504461 DEFB115Q30KQ5 88 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms