RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 SRCIN1Q9C0H9 1055 aa9.87□□□□□ -0.83
SKP2-203ENST00000504386 RNF181Q9P0P0 153 aa9.87□□□□□ -0.83
SKP2-203ENST00000504386 ARFGEF2Q9Y6D5 1785 aa9.87□□□□□ -0.83
SKP2-203ENST00000504386 ANKRD31Q8N7Z5 1873 aa9.87□□□□□ -0.83
SKP2-203ENST00000504386 GCKRQ14397 625 aa9.86□□□□□ -0.83
SKP2-203ENST00000504386 C9orf131Q5VYM1 1079 aa9.86□□□□□ -0.83
SKP2-203ENST00000504386 G2E3Q7L622 706 aa9.86□□□□□ -0.83
SKP2-203ENST00000504386 SP8Q8IXZ3 490 aa9.86□□□□□ -0.83
SKP2-203ENST00000504386 ARHGAP45Q92619 1136 aa9.86□□□□□ -0.83
SKP2-203ENST00000504386 CDCA7LQ96GN5 454 aa9.86□□□□□ -0.83
SKP2-203ENST00000504386 GPBP1L1Q9HC44 474 aaPredicted RBP9.86□□□□□ -0.83
SKP2-203ENST00000504386 C9orf78Q9NZ63 289 aaPredicted RBP9.86□□□□□ -0.83
SKP2-203ENST00000504386 ATP6V0A2Q9Y487 856 aa9.86□□□□□ -0.83
SKP2-203ENST00000504386 H7C1W4 665 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 IGKV5-2P06315 115 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 CCT4P50991 539 aaKnown RBP9.85□□□□□ -0.83
SKP2-203ENST00000504386 CTSWP56202 376 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 SLC4A10Q6U841 1118 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 UBE3BQ7Z3V4 1068 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 MRPL50Q8N5N7 158 aaKnown RBP9.85□□□□□ -0.83
SKP2-203ENST00000504386 ZNF784Q8NCA9 323 aaPredicted RBP9.85□□□□□ -0.83
SKP2-203ENST00000504386 C7orf43Q8WVR3 580 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 JDP2Q8WYK2 163 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 SSH1Q8WYL5 1049 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 PLA2G12BQ9BX93 195 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 RTL9Q8NET4 1388 aa9.85□□□□□ -0.83
SKP2-203ENST00000504386 COL11A2P13942 1736 aaPredicted RBP9.85□□□□□ -0.83
SKP2-203ENST00000504386 SRCAPQ6ZRS2 3230 aa9.84□□□□□ -0.83
SKP2-203ENST00000504386 ABCC4O15439 1325 aa9.84□□□□□ -0.83
SKP2-203ENST00000504386 RPS8P62241 208 aaKnown RBP9.84□□□□□ -0.83
SKP2-203ENST00000504386 CWF19L2Q2TBE0 894 aaKnown RBP9.84□□□□□ -0.83
SKP2-203ENST00000504386 BEND3Q5T5X7 828 aa9.84□□□□□ -0.83
SKP2-203ENST00000504386 DPP8Q6V1X1 898 aaPredicted RBP9.84□□□□□ -0.83
SKP2-203ENST00000504386 ANKRD18AQ8IVF6 992 aa9.84□□□□□ -0.83
SKP2-203ENST00000504386 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
SKP2-203ENST00000504386 NFKBIEO00221 500 aa9.83□□□□□ -0.84
SKP2-203ENST00000504386 GRM8O00222 908 aa9.83□□□□□ -0.84
SKP2-203ENST00000504386 IGHMBP2P38935 993 aaKnown RBP9.83□□□□□ -0.84
SKP2-203ENST00000504386 RTL5Q5HYW3 569 aaPredicted RBP9.83□□□□□ -0.84
SKP2-203ENST00000504386 MPNDQ8N594 471 aa9.83□□□□□ -0.84
SKP2-203ENST00000504386 EYA3Q99504 573 aa9.83□□□□□ -0.84
SKP2-203ENST00000504386 F6X3S4 739 aa9.82□□□□□ -0.84
SKP2-203ENST00000504386 MS4A1P11836 297 aa9.82□□□□□ -0.84
SKP2-203ENST00000504386 IARSP41252 1262 aaKnown RBP9.82□□□□□ -0.84
SKP2-203ENST00000504386 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
SKP2-203ENST00000504386 C16orf71Q8IYS4 520 aaPredicted RBP9.82□□□□□ -0.84
SKP2-203ENST00000504386 MPHOSPH8Q99549 860 aa9.82□□□□□ -0.84
SKP2-203ENST00000504386 RTFDC1Q9BY42 306 aaPredicted RBP9.82□□□□□ -0.84
SKP2-203ENST00000504386 TNRC6CQ9HCJ0 1690 aaKnown RBP9.82□□□□□ -0.84
SKP2-203ENST00000504386 LAMB2P55268 1798 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 ANKRD18BA2A2Z9 1011 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 IQCA1LA6NCM1 817 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 GLTPD2A6NH11 291 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 CAPN15O75808 1086 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 EIF6P56537 245 aaKnown RBP9.81□□□□□ -0.84
SKP2-203ENST00000504386 RASSF7Q02833 373 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 IFIT5Q13325 482 aaKnown RBP9.81□□□□□ -0.84
SKP2-203ENST00000504386 C3orf67Q6ZVT6 689 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 NIM1KQ8IY84 436 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 SYNE4Q8N205 404 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 LARGE2Q8N3Y3 721 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 TTLL11Q8NHH1 800 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 BCL2L13Q9BXK5 485 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 BSDC1Q9NW68 430 aaPredicted RBP9.81□□□□□ -0.84
SKP2-203ENST00000504386 SLX4Q8IY92 1834 aa9.81□□□□□ -0.84
SKP2-203ENST00000504386 PPIP5K2O43314 1243 aa9.8□□□□□ -0.84
SKP2-203ENST00000504386 CCDC57Q2TAC2 916 aa9.8□□□□□ -0.84
SKP2-203ENST00000504386 TAF7LQ5H9L4 462 aa9.8□□□□□ -0.84
SKP2-203ENST00000504386 ANKRD2Q9GZV1 360 aa9.8□□□□□ -0.84
SKP2-203ENST00000504386 ZNF277Q9NRM2 450 aaPredicted RBP9.8□□□□□ -0.84
SKP2-203ENST00000504386 ANKIB1Q9P2G1 1089 aa9.8□□□□□ -0.84
SKP2-203ENST00000504386 NOB1Q9ULX3 412 aaKnown RBP9.8□□□□□ -0.84
SKP2-203ENST00000504386 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
SKP2-203ENST00000504386 UTYO14607 1347 aa9.8□□□□□ -0.84
SKP2-203ENST00000504386 XDHP47989 1333 aa9.8□□□□□ -0.84
SKP2-203ENST00000504386 FER1L6Q2WGJ9 1857 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 G3V3G9 751 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 CSF1RP07333 972 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 GNAI3P08754 354 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 UBTFL1P0CB47 393 aaPredicted RBP9.79□□□□□ -0.84
SKP2-203ENST00000504386 ITGA6P23229 1130 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 CASP7P55210 303 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 KIAA2012Q0VF49 1180 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 WASHC4Q2M389 1173 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 ZKSCAN2Q63HK3 967 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 ATF7IPQ6VMQ6 1270 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 CELF1Q92879 486 aaKnown RBP9.79□□□□□ -0.84
SKP2-203ENST00000504386 CHMP4BQ9H444 224 aaKnown RBP9.79□□□□□ -0.84
SKP2-203ENST00000504386 PODXL2Q9NZ53 605 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 GGA1Q9UJY5 639 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 CHMP3Q9Y3E7 222 aa9.79□□□□□ -0.84
SKP2-203ENST00000504386 DDX60Q8IY21 1712 aaKnown RBP9.79□□□□□ -0.84
SKP2-203ENST00000504386 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
SKP2-203ENST00000504386 VEGFAP15692 232 aaPredicted RBP9.78□□□□□ -0.84
SKP2-203ENST00000504386 ATP2B4P23634 1241 aa9.78□□□□□ -0.84
SKP2-203ENST00000504386 TNIP1Q15025 636 aa9.78□□□□□ -0.84
SKP2-203ENST00000504386 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
SKP2-203ENST00000504386 GPC2Q8N158 579 aa9.78□□□□□ -0.84
SKP2-203ENST00000504386 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms