RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 ZBED9Q6R2W3 1325 aa26.24■■□□□ 1.79
PDGFRA-203ENST00000503856 GRAPQ13588 217 aa26.24■■□□□ 1.79
PDGFRA-203ENST00000503856 SLC4A10Q6U841 1118 aa26.24■■□□□ 1.79
PDGFRA-203ENST00000503856 GRAPLQ8TC17 118 aaPredicted RBP26.24■■□□□ 1.79
PDGFRA-203ENST00000503856 TIAM2Q8IVF5 1701 aa26.23■■□□□ 1.79
PDGFRA-203ENST00000503856 BBOX1O75936 387 aa26.23■■□□□ 1.79
PDGFRA-203ENST00000503856 CC2D2BQ6DHV5 1058 aa26.23■■□□□ 1.79
PDGFRA-203ENST00000503856 SNED1Q8TER0 1413 aa26.22■■□□□ 1.79
PDGFRA-203ENST00000503856 COL4A1P02462 1669 aa26.22■■□□□ 1.79
PDGFRA-203ENST00000503856 PTPRCP08575 1304 aa26.22■■□□□ 1.79
PDGFRA-203ENST00000503856 FKBP4Q02790 459 aaKnown RBP eCLIP26.22■■□□□ 1.79
PDGFRA-203ENST00000503856 ZNF526Q8TF50 670 aaPredicted RBP26.22■■□□□ 1.79
PDGFRA-203ENST00000503856 ATP6V0A2Q9Y487 856 aa26.22■■□□□ 1.79
PDGFRA-203ENST00000503856 CASP7P55210 303 aa26.21■■□□□ 1.79
PDGFRA-203ENST00000503856 CELF1Q92879 486 aaKnown RBP26.21■■□□□ 1.79
PDGFRA-203ENST00000503856 RARSP54136 660 aaKnown RBP26.2■■□□□ 1.78
PDGFRA-203ENST00000503856 CCDC152Q4G0S7 254 aa26.2■■□□□ 1.78
PDGFRA-203ENST00000503856 CCDC85AQ96PX6 553 aaPredicted RBP26.2■■□□□ 1.78
PDGFRA-203ENST00000503856 SP8Q8IXZ3 490 aa26.19■■□□□ 1.78
PDGFRA-203ENST00000503856 SRCIN1Q9C0H9 1055 aa26.19■■□□□ 1.78
PDGFRA-203ENST00000503856 SEC31BQ9NQW1 1179 aa26.19■■□□□ 1.78
PDGFRA-203ENST00000503856 ZNF277Q9NRM2 450 aaPredicted RBP26.19■■□□□ 1.78
PDGFRA-203ENST00000503856 ALDH1L1O75891 902 aa26.18■■□□□ 1.78
PDGFRA-203ENST00000503856 CTSWP56202 376 aa26.18■■□□□ 1.78
PDGFRA-203ENST00000503856 TMX4Q9H1E5 349 aaPredicted RBP26.18■■□□□ 1.78
PDGFRA-203ENST00000503856 LRRC37AA6NMS7 1700 aa26.17■■□□□ 1.78
PDGFRA-203ENST00000503856 BRPF1P55201 1214 aaPredicted RBP26.17■■□□□ 1.78
PDGFRA-203ENST00000503856 GRIPAP1Q4V328 841 aa26.17■■□□□ 1.78
PDGFRA-203ENST00000503856 TTLL11Q8NHH1 800 aa26.17■■□□□ 1.78
PDGFRA-203ENST00000503856 PSMD1Q99460 953 aa26.17■■□□□ 1.78
PDGFRA-203ENST00000503856 PLA2G12BQ9BX93 195 aa26.17■■□□□ 1.78
PDGFRA-203ENST00000503856 GPBP1L1Q9HC44 474 aaPredicted RBP26.17■■□□□ 1.78
PDGFRA-203ENST00000503856 SPEF2Q9C093 1822 aa26.16■■□□□ 1.78
PDGFRA-203ENST00000503856 RPS8P62241 208 aaKnown RBP26.16■■□□□ 1.78
PDGFRA-203ENST00000503856 TMC4Q7Z404 712 aa26.16■■□□□ 1.78
PDGFRA-203ENST00000503856 NOB1Q9ULX3 412 aaKnown RBP26.16■■□□□ 1.78
PDGFRA-203ENST00000503856 ZC3H4Q9UPT8 1303 aaKnown RBP26.15■■□□□ 1.78
PDGFRA-203ENST00000503856 C9orf78Q9NZ63 289 aaPredicted RBP26.15■■□□□ 1.78
PDGFRA-203ENST00000503856 GRM8O00222 908 aa26.14■■□□□ 1.78
PDGFRA-203ENST00000503856 GREM2Q9H772 168 aa26.14■■□□□ 1.78
PDGFRA-203ENST00000503856 IARSP41252 1262 aaKnown RBP26.13■■□□□ 1.77
PDGFRA-203ENST00000503856 MPNDQ8N594 471 aa26.12■■□□□ 1.77
PDGFRA-203ENST00000503856 DPP8Q6V1X1 898 aaPredicted RBP26.11■■□□□ 1.77
PDGFRA-203ENST00000503856 RTL9Q8NET4 1388 aa26.1■■□□□ 1.77
PDGFRA-203ENST00000503856 BCAR3O75815 825 aa26.1■■□□□ 1.77
PDGFRA-203ENST00000503856 CSF1RP07333 972 aa26.1■■□□□ 1.77
PDGFRA-203ENST00000503856 FOXO4P98177 505 aa26.1■■□□□ 1.77
PDGFRA-203ENST00000503856 ANKRD18AQ8IVF6 992 aa26.1■■□□□ 1.77
PDGFRA-203ENST00000503856 RTFDC1Q9BY42 306 aaPredicted RBP26.1■■□□□ 1.77
PDGFRA-203ENST00000503856 CDC5LQ99459 802 aaKnown RBP26.09■■□□□ 1.77
PDGFRA-203ENST00000503856 API5Q9BZZ5 524 aaKnown RBP26.09■■□□□ 1.77
PDGFRA-203ENST00000503856 KDM2BQ8NHM5 1336 aa26.09■■□□□ 1.77
PDGFRA-203ENST00000503856 KIF16BQ96L93 1317 aa26.09■■□□□ 1.77
PDGFRA-203ENST00000503856 GLTPD2A6NH11 291 aa26.08■■□□□ 1.77
PDGFRA-203ENST00000503856 NBPF7P0C2Y1 421 aaPredicted RBP26.08■■□□□ 1.77
PDGFRA-203ENST00000503856 EPHA10Q5JZY3 1008 aa26.08■■□□□ 1.77
PDGFRA-203ENST00000503856 NMRK2Q9NPI5 230 aa26.08■■□□□ 1.77
PDGFRA-203ENST00000503856 NSFL1CQ9UNZ2 370 aaKnown RBP26.08■■□□□ 1.77
PDGFRA-203ENST00000503856 COL4A5P29400 1685 aa26.08■■□□□ 1.77
PDGFRA-203ENST00000503856 LTBP1Q14766 1721 aa26.08■■□□□ 1.76
PDGFRA-203ENST00000503856 DUOX1Q9NRD9 1551 aa26.07■■□□□ 1.76
PDGFRA-203ENST00000503856 GPSM2P81274 684 aa26.07■■□□□ 1.76
PDGFRA-203ENST00000503856 FAM161AQ3B820 660 aa26.07■■□□□ 1.76
PDGFRA-203ENST00000503856 DPY19L2Q6NUT2 758 aa26.07■■□□□ 1.76
PDGFRA-203ENST00000503856 LARGE2Q8N3Y3 721 aa26.07■■□□□ 1.76
PDGFRA-203ENST00000503856 SUPT20HQ8NEM7 779 aa26.07■■□□□ 1.76
PDGFRA-203ENST00000503856 UTYO14607 1347 aa26.07■■□□□ 1.76
PDGFRA-203ENST00000503856 PPIP5K2O43314 1243 aa26.06■■□□□ 1.76
PDGFRA-203ENST00000503856 ITGA6P23229 1130 aa26.06■■□□□ 1.76
PDGFRA-203ENST00000503856 JDP2Q8WYK2 163 aa26.06■■□□□ 1.76
PDGFRA-203ENST00000503856 ARHGAP45Q92619 1136 aa26.06■■□□□ 1.76
PDGFRA-203ENST00000503856 SUCLG2Q96I99 432 aa26.06■■□□□ 1.76
PDGFRA-203ENST00000503856 AOC3Q16853 763 aa26.05■■□□□ 1.76
PDGFRA-203ENST00000503856 LMBR1LQ6UX01 489 aa26.05■■□□□ 1.76
PDGFRA-203ENST00000503856 USP44Q9H0E7 712 aa26.05■■□□□ 1.76
PDGFRA-203ENST00000503856 KIF3CO14782 793 aa26.04■■□□□ 1.76
PDGFRA-203ENST00000503856 CCT4P50991 539 aaKnown RBP26.04■■□□□ 1.76
PDGFRA-203ENST00000503856 FRAT1Q92837 279 aaPredicted RBP26.04■■□□□ 1.76
PDGFRA-203ENST00000503856 KAZALD1Q96I82 304 aa26.04■■□□□ 1.76
PDGFRA-203ENST00000503856 VPS33BQ9H267 617 aa26.04■■□□□ 1.76
PDGFRA-203ENST00000503856 RRAGCQ9HB90 399 aa26.04■■□□□ 1.76
PDGFRA-203ENST00000503856 CHMP3Q9Y3E7 222 aa26.04■■□□□ 1.76
PDGFRA-203ENST00000503856 FZD9O00144 591 aa26.03■■□□□ 1.76
PDGFRA-203ENST00000503856 BSDC1Q9NW68 430 aaPredicted RBP26.03■■□□□ 1.76
PDGFRA-203ENST00000503856 POLLQ9UGP5 575 aa26.03■■□□□ 1.76
PDGFRA-203ENST00000503856 ANKRD18BA2A2Z9 1011 aa26.02■■□□□ 1.76
PDGFRA-203ENST00000503856 C6orf229H3BNL8 230 aa26.02■■□□□ 1.76
PDGFRA-203ENST00000503856 IPO8O15397 1037 aaKnown RBP26.02■■□□□ 1.76
PDGFRA-203ENST00000503856 DDNO94850 711 aaPredicted RBP26.02■■□□□ 1.76
PDGFRA-203ENST00000503856 ANKIB1Q9P2G1 1089 aa26.02■■□□□ 1.76
PDGFRA-203ENST00000503856 ZNF541Q9H0D2 1346 aa26.02■■□□□ 1.76
PDGFRA-203ENST00000503856 WDR90Q96KV7 1748 aa26.02■■□□□ 1.76
PDGFRA-203ENST00000503856 IGHMBP2P38935 993 aaKnown RBP26.01■■□□□ 1.75
PDGFRA-203ENST00000503856 KIAA2012Q0VF49 1180 aa26.01■■□□□ 1.75
PDGFRA-203ENST00000503856 NIM1KQ8IY84 436 aa26.01■■□□□ 1.75
PDGFRA-203ENST00000503856 PODXL2Q9NZ53 605 aa26.01■■□□□ 1.75
PDGFRA-203ENST00000503856 TNNQ9UQP3 1299 aa26.01■■□□□ 1.75
PDGFRA-203ENST00000503856 TRIM27P14373 513 aa26■■□□□ 1.75
PDGFRA-203ENST00000503856 IFIT5Q13325 482 aaKnown RBP26■■□□□ 1.75
PDGFRA-203ENST00000503856 ATF7IPQ6VMQ6 1270 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms