RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 FAM89AQ96GI7 184 aa11.16□□□□□ -0.62
NR1I3-216ENST00000502848 ARXQ96QS3 562 aa11.16□□□□□ -0.62
NR1I3-216ENST00000502848 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
NR1I3-216ENST00000502848 ERC2O15083 957 aa11.15□□□□□ -0.62
NR1I3-216ENST00000502848 APBA3O96018 575 aa11.15□□□□□ -0.62
NR1I3-216ENST00000502848 GPTP24298 496 aa11.15□□□□□ -0.62
NR1I3-216ENST00000502848 RFC4P35249 363 aa11.15□□□□□ -0.62
NR1I3-216ENST00000502848 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
NR1I3-216ENST00000502848 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
NR1I3-216ENST00000502848 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
NR1I3-216ENST00000502848 MYH3P11055 1940 aa11.14□□□□□ -0.63
NR1I3-216ENST00000502848 EYA2O00167 538 aa11.14□□□□□ -0.63
NR1I3-216ENST00000502848 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
NR1I3-216ENST00000502848 SUSD4Q5VX71 490 aa11.14□□□□□ -0.63
NR1I3-216ENST00000502848 SETDB2Q96T68 719 aa11.14□□□□□ -0.63
NR1I3-216ENST00000502848 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
NR1I3-216ENST00000502848 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
NR1I3-216ENST00000502848 QSER1Q2KHR3 1735 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
NR1I3-216ENST00000502848 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 GLRX3O76003 335 aaKnown RBP11.13□□□□□ -0.63
NR1I3-216ENST00000502848 SASH1O94885 1247 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
NR1I3-216ENST00000502848 USPL1Q5W0Q7 1092 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 TPTE2Q6XPS3 522 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 PROM2Q8N271 834 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
NR1I3-216ENST00000502848 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
NR1I3-216ENST00000502848 CDC45O75419 566 aa11.12□□□□□ -0.63
NR1I3-216ENST00000502848 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
NR1I3-216ENST00000502848 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
NR1I3-216ENST00000502848 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
NR1I3-216ENST00000502848 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
NR1I3-216ENST00000502848 ZNF609O15014 1411 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 APBB1O00213 710 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
NR1I3-216ENST00000502848 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-216ENST00000502848 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
NR1I3-216ENST00000502848 ITGA6P23229 1130 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 KCNQ4P56696 695 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 TBC1D9BQ66K14 1250 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
NR1I3-216ENST00000502848 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
NR1I3-216ENST00000502848 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
NR1I3-216ENST00000502848 MROH5Q6ZUA9 1318 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 TUBGCP6Q96RT7 1819 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 GYS1P13807 737 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 NBPF5PQ86XG9 351 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-216ENST00000502848 C16orf71Q8IYS4 520 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-216ENST00000502848 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 CAMKK2Q96RR4 588 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
NR1I3-216ENST00000502848 TM4SF1P30408 202 aa11.09□□□□□ -0.63
NR1I3-216ENST00000502848 BAG6P46379 1132 aa11.09□□□□□ -0.63
NR1I3-216ENST00000502848 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
NR1I3-216ENST00000502848 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-216ENST00000502848 AACSQ86V21 672 aa11.09□□□□□ -0.63
NR1I3-216ENST00000502848 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
NR1I3-216ENST00000502848 OTUD7AQ8TE49 926 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-216ENST00000502848 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
NR1I3-216ENST00000502848 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-216ENST00000502848 SIL1Q9H173 461 aa11.09□□□□□ -0.63
NR1I3-216ENST00000502848 GREM2Q9H772 168 aa11.09□□□□□ -0.63
NR1I3-216ENST00000502848 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
NR1I3-216ENST00000502848 RIPOR2Q9Y4F9 1068 aa11.09□□□□□ -0.63
NR1I3-216ENST00000502848 SPEF2Q9C093 1822 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 ATP5JP18859 108 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 SDSP20132 328 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-216ENST00000502848 TFCP2Q12800 502 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 LDHAL6AQ6ZMR3 332 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 CNTROBQ8N137 903 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-216ENST00000502848 ZNF512BQ96KM6 892 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-216ENST00000502848 NLRP3Q96P20 1036 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 TFCP2L1Q9NZI6 479 aa11.08□□□□□ -0.64
NR1I3-216ENST00000502848 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-216ENST00000502848 NRXN2Q9P2S2 1712 aa11.07□□□□□ -0.64
NR1I3-216ENST00000502848 HIP1O00291 1037 aa11.07□□□□□ -0.64
NR1I3-216ENST00000502848 PHF14O94880 888 aa11.07□□□□□ -0.64
NR1I3-216ENST00000502848 HCLS1P14317 486 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-216ENST00000502848 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
NR1I3-216ENST00000502848 NFIXQ14938 502 aa11.07□□□□□ -0.64
NR1I3-216ENST00000502848 ERFEQ4G0M1 354 aa11.07□□□□□ -0.64
NR1I3-216ENST00000502848 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
NR1I3-216ENST00000502848 SYNE4Q8N205 404 aa11.07□□□□□ -0.64
NR1I3-216ENST00000502848 CNBD1Q8NA66 436 aa11.07□□□□□ -0.64
NR1I3-216ENST00000502848 KLHDC4Q8TBB5 520 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms