RNA–Protein interactions for RNA: ENST00000502775.1

LINC00955-201, long intergenic non-protein coding RNA 955, humanhuman

TSL 1 (best)

Gene LINC00955, Length 856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-201ENST00000502775 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
LINC00955-201ENST00000502775 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
LINC00955-201ENST00000502775 TNIP1Q15025 636 aa16.75■□□□□ 0.27
LINC00955-201ENST00000502775 CIAPIN1Q6FI81 312 aa16.75■□□□□ 0.27
LINC00955-201ENST00000502775 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
LINC00955-201ENST00000502775 BEGAINQ9BUH8 593 aa16.75■□□□□ 0.27
LINC00955-201ENST00000502775 LRRC37AA6NMS7 1700 aa16.74■□□□□ 0.27
LINC00955-201ENST00000502775 LBX1P52954 281 aa16.74■□□□□ 0.27
LINC00955-201ENST00000502775 CXCL9Q07325 125 aa16.74■□□□□ 0.27
LINC00955-201ENST00000502775 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
LINC00955-201ENST00000502775 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
LINC00955-201ENST00000502775 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
LINC00955-201ENST00000502775 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
LINC00955-201ENST00000502775 GMPSP49915 693 aaPredicted RBP16.73■□□□□ 0.27
LINC00955-201ENST00000502775 SLC51AQ86UW1 340 aa16.73■□□□□ 0.27
LINC00955-201ENST00000502775 CCDC146Q8IYE0 955 aa16.73■□□□□ 0.27
LINC00955-201ENST00000502775 PLBD2Q8NHP8 589 aa16.73■□□□□ 0.27
LINC00955-201ENST00000502775 CAPNS2Q96L46 248 aa16.73■□□□□ 0.27
LINC00955-201ENST00000502775 CHPF2Q9P2E5 772 aa16.73■□□□□ 0.27
LINC00955-201ENST00000502775 DBF4Q9UBU7 674 aaPredicted RBP16.73■□□□□ 0.27
LINC00955-201ENST00000502775 DDX60Q8IY21 1712 aaKnown RBP16.73■□□□□ 0.27
LINC00955-201ENST00000502775 HSPA8P11142 646 aaKnown RBP16.72■□□□□ 0.27
LINC00955-201ENST00000502775 ZC3H15Q8WU90 426 aaKnown RBP16.72■□□□□ 0.27
LINC00955-201ENST00000502775 TLL2Q9Y6L7 1015 aa16.72■□□□□ 0.27
LINC00955-201ENST00000502775 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
LINC00955-201ENST00000502775 HYPKQ9NX55 129 aa16.71■□□□□ 0.27
LINC00955-201ENST00000502775 TAF1P21675 1872 aa16.7■□□□□ 0.26
LINC00955-201ENST00000502775 TRAF5O00463 557 aa16.7■□□□□ 0.26
LINC00955-201ENST00000502775 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
LINC00955-201ENST00000502775 GPR101Q96P66 508 aaPredicted RBP16.7■□□□□ 0.26
LINC00955-201ENST00000502775 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
LINC00955-201ENST00000502775 DUOX1Q9NRD9 1551 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 H7C1D1 291 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 RAD17O75943 681 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 CELF2O95319 508 aaKnown RBP16.69■□□□□ 0.26
LINC00955-201ENST00000502775 HSP90B1P14625 803 aaKnown RBP16.69■□□□□ 0.26
LINC00955-201ENST00000502775 MAP2K2P36507 400 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 FMR1Q06787 632 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC00955-201ENST00000502775 GRM1Q13255 1194 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 SF3B3Q15393 1217 aaKnown RBP16.69■□□□□ 0.26
LINC00955-201ENST00000502775 CST9Q5W186 159 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 CYP4F22Q6NT55 531 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 HHIPL1Q96JK4 782 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 ISCA1Q9BUE6 129 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 PGAP2Q9UHJ9 254 aa16.69■□□□□ 0.26
LINC00955-201ENST00000502775 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
LINC00955-201ENST00000502775 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
LINC00955-201ENST00000502775 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
LINC00955-201ENST00000502775 EYA3Q99504 573 aa16.68■□□□□ 0.26
LINC00955-201ENST00000502775 CA12O43570 354 aa16.67■□□□□ 0.26
LINC00955-201ENST00000502775 CALD1Q05682 793 aaKnown RBP16.67■□□□□ 0.26
LINC00955-201ENST00000502775 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
LINC00955-201ENST00000502775 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
LINC00955-201ENST00000502775 DUSP27Q5VZP5 1158 aa16.67■□□□□ 0.26
LINC00955-201ENST00000502775 SAPCD2Q86UD0 394 aa16.67■□□□□ 0.26
LINC00955-201ENST00000502775 DPF2Q92785 391 aa16.67■□□□□ 0.26
LINC00955-201ENST00000502775 GLIS2Q9BZE0 524 aaPredicted RBP16.67■□□□□ 0.26
LINC00955-201ENST00000502775 CNOT7Q9UIV1 285 aaKnown RBP16.67■□□□□ 0.26
LINC00955-201ENST00000502775 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
LINC00955-201ENST00000502775 MICALL2Q8IY33 904 aa16.66■□□□□ 0.26
LINC00955-201ENST00000502775 FAM89AQ96GI7 184 aa16.66■□□□□ 0.26
LINC00955-201ENST00000502775 CHMP4AQ9BY43 222 aa16.66■□□□□ 0.26
LINC00955-201ENST00000502775 NSFL1CQ9UNZ2 370 aaKnown RBP16.66■□□□□ 0.26
LINC00955-201ENST00000502775 YDJCA8MPS7 323 aa16.65■□□□□ 0.26
LINC00955-201ENST00000502775 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
LINC00955-201ENST00000502775 C6orf229H3BNL8 230 aa16.65■□□□□ 0.26
LINC00955-201ENST00000502775 RPS12P25398 132 aaKnown RBP16.65■□□□□ 0.26
LINC00955-201ENST00000502775 TRPM4Q8TD43 1214 aa16.65■□□□□ 0.26
LINC00955-201ENST00000502775 CELF1Q92879 486 aaKnown RBP16.65■□□□□ 0.26
LINC00955-201ENST00000502775 ZNF408Q9H9D4 720 aa16.65■□□□□ 0.26
LINC00955-201ENST00000502775 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
LINC00955-201ENST00000502775 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
LINC00955-201ENST00000502775 RIC3Q7Z5B4 369 aa16.64■□□□□ 0.25
LINC00955-201ENST00000502775 ABHD8Q96I13 439 aa16.64■□□□□ 0.25
LINC00955-201ENST00000502775 PSMD14O00487 310 aa16.63■□□□□ 0.25
LINC00955-201ENST00000502775 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
LINC00955-201ENST00000502775 ZBTB38Q8NAP3 1195 aaPredicted RBP16.63■□□□□ 0.25
LINC00955-201ENST00000502775 DBNDD1Q9H9R9 158 aa16.63■□□□□ 0.25
LINC00955-201ENST00000502775 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
LINC00955-201ENST00000502775 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
LINC00955-201ENST00000502775 ECE2O60344 883 aa16.62■□□□□ 0.25
LINC00955-201ENST00000502775 AOC2O75106 756 aa16.62■□□□□ 0.25
LINC00955-201ENST00000502775 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
LINC00955-201ENST00000502775 RPS8P62241 208 aaKnown RBP16.62■□□□□ 0.25
LINC00955-201ENST00000502775 GNAI1P63096 354 aa16.62■□□□□ 0.25
LINC00955-201ENST00000502775 GPSM2P81274 684 aa16.62■□□□□ 0.25
LINC00955-201ENST00000502775 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
LINC00955-201ENST00000502775 ZNF428Q96B54 188 aa16.62■□□□□ 0.25
LINC00955-201ENST00000502775 ZBTB12Q9Y330 459 aaPredicted RBP16.62■□□□□ 0.25
LINC00955-201ENST00000502775 G3V3G9 751 aa16.61■□□□□ 0.25
LINC00955-201ENST00000502775 RIMBP2O15034 1052 aa16.61■□□□□ 0.25
LINC00955-201ENST00000502775 DDX58O95786 925 aaKnown RBP16.61■□□□□ 0.25
LINC00955-201ENST00000502775 NOGQ13253 232 aa16.61■□□□□ 0.25
LINC00955-201ENST00000502775 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
LINC00955-201ENST00000502775 ZC3H12CQ9C0D7 883 aaKnown RBP16.61■□□□□ 0.25
LINC00955-201ENST00000502775 POLLQ9UGP5 575 aa16.61■□□□□ 0.25
LINC00955-201ENST00000502775 ZNF853P0CG23 659 aa16.6■□□□□ 0.25
LINC00955-201ENST00000502775 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
LINC00955-201ENST00000502775 USP48Q86UV5 1035 aa16.6■□□□□ 0.25
LINC00955-201ENST00000502775 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms