RNA–Protein interactions for RNA: ENST00000502730.5

TNFRSF25-217, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-217ENST00000502730 G2E3Q7L622 706 aa29.31■■■□□ 2.28
TNFRSF25-217ENST00000502730 CELF1Q92879 486 aaKnown RBP29.31■■■□□ 2.28
TNFRSF25-217ENST00000502730 IQCA1LA6NCM1 817 aa29.3■■■□□ 2.28
TNFRSF25-217ENST00000502730 CHADLQ6NUI6 762 aa29.3■■■□□ 2.28
TNFRSF25-217ENST00000502730 FAM9BQ8IZU0 186 aa29.3■■■□□ 2.28
TNFRSF25-217ENST00000502730 GPC2Q8N158 579 aa29.3■■■□□ 2.28
TNFRSF25-217ENST00000502730 GJA3Q9Y6H8 435 aa29.3■■■□□ 2.28
TNFRSF25-217ENST00000502730 CACNA1FO60840 1977 aa29.3■■■□□ 2.28
TNFRSF25-217ENST00000502730 MYH3P11055 1940 aa29.3■■■□□ 2.28
TNFRSF25-217ENST00000502730 SPEF2Q9C093 1822 aa29.29■■■□□ 2.28
TNFRSF25-217ENST00000502730 NCBP3Q53F19 620 aaKnown RBP29.29■■■□□ 2.28
TNFRSF25-217ENST00000502730 DPP8Q6V1X1 898 aaPredicted RBP29.29■■■□□ 2.28
TNFRSF25-217ENST00000502730 ZBTB38Q8NAP3 1195 aaPredicted RBP29.29■■■□□ 2.28
TNFRSF25-217ENST00000502730 METTL22Q9BUU2 404 aaPredicted RBP29.29■■■□□ 2.28
TNFRSF25-217ENST00000502730 RTFDC1Q9BY42 306 aaPredicted RBP29.29■■■□□ 2.28
TNFRSF25-217ENST00000502730 MAP3K2Q9Y2U5 619 aa29.29■■■□□ 2.28
TNFRSF25-217ENST00000502730 EIF6P56537 245 aaKnown RBP29.28■■■□□ 2.28
TNFRSF25-217ENST00000502730 MPNDQ8N594 471 aa29.28■■■□□ 2.28
TNFRSF25-217ENST00000502730 SPINK5Q9NQ38 1064 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF25-217ENST00000502730 HACL1Q9UJ83 578 aa29.28■■■□□ 2.28
TNFRSF25-217ENST00000502730 EPHX2P34913 555 aa29.27■■■□□ 2.28
TNFRSF25-217ENST00000502730 EAPPQ56P03 285 aaPredicted RBP29.27■■■□□ 2.28
TNFRSF25-217ENST00000502730 NIM1KQ8IY84 436 aa29.27■■■□□ 2.28
TNFRSF25-217ENST00000502730 TMX4Q9H1E5 349 aaPredicted RBP29.27■■■□□ 2.28
TNFRSF25-217ENST00000502730 PI4KAP2A4QPH2 592 aa29.26■■■□□ 2.27
TNFRSF25-217ENST00000502730 PI4KAP1Q8N8J0 262 aa29.26■■■□□ 2.27
TNFRSF25-217ENST00000502730 CCDC191Q8NCU4 936 aa29.26■■■□□ 2.27
TNFRSF25-217ENST00000502730 KLRG1Q96E93 195 aa29.26■■■□□ 2.27
TNFRSF25-217ENST00000502730 DDX58O95786 925 aaKnown RBP29.25■■■□□ 2.27
TNFRSF25-217ENST00000502730 IGKV5-2P06315 115 aa29.25■■■□□ 2.27
TNFRSF25-217ENST00000502730 KSR2Q6VAB6 950 aa29.25■■■□□ 2.27
TNFRSF25-217ENST00000502730 LDHDQ86WU2 507 aa29.25■■■□□ 2.27
TNFRSF25-217ENST00000502730 STK31Q9BXU1 1019 aa29.25■■■□□ 2.27
TNFRSF25-217ENST00000502730 CWC25Q9NXE8 425 aaPredicted RBP29.25■■■□□ 2.27
TNFRSF25-217ENST00000502730 PCCAP05165 728 aaPredicted RBP29.24■■■□□ 2.27
TNFRSF25-217ENST00000502730 SEC31BQ9NQW1 1179 aa29.24■■■□□ 2.27
TNFRSF25-217ENST00000502730 SLC4A2P04920 1241 aa29.23■■■□□ 2.27
TNFRSF25-217ENST00000502730 SCNN1DP51172 638 aa29.23■■■□□ 2.27
TNFRSF25-217ENST00000502730 WDR63Q8IWG1 891 aa29.23■■■□□ 2.27
TNFRSF25-217ENST00000502730 SUPT20HQ8NEM7 779 aa29.23■■■□□ 2.27
TNFRSF25-217ENST00000502730 EXOSC9Q06265 439 aaKnown RBP29.22■■■□□ 2.27
TNFRSF25-217ENST00000502730 KIAA2012Q0VF49 1180 aa29.22■■■□□ 2.27
TNFRSF25-217ENST00000502730 CCDC85AQ96PX6 553 aaPredicted RBP29.22■■■□□ 2.27
TNFRSF25-217ENST00000502730 EPS15P42566 896 aa29.21■■■□□ 2.27
TNFRSF25-217ENST00000502730 CWF19L2Q2TBE0 894 aaKnown RBP29.21■■■□□ 2.27
TNFRSF25-217ENST00000502730 CHMP4AQ9BY43 222 aa29.21■■■□□ 2.27
TNFRSF25-217ENST00000502730 GPSM2P81274 684 aa29.2■■■□□ 2.26
TNFRSF25-217ENST00000502730 CXCL9Q07325 125 aa29.2■■■□□ 2.26
TNFRSF25-217ENST00000502730 TMC4Q7Z404 712 aa29.2■■■□□ 2.26
TNFRSF25-217ENST00000502730 VPS33BQ9H267 617 aa29.2■■■□□ 2.26
TNFRSF25-217ENST00000502730 ZNRF3Q9ULT6 936 aa29.2■■■□□ 2.26
TNFRSF25-217ENST00000502730 PASKQ96RG2 1323 aa29.2■■■□□ 2.26
TNFRSF25-217ENST00000502730 VAMP4O75379 141 aa29.19■■■□□ 2.26
TNFRSF25-217ENST00000502730 GPR101Q96P66 508 aaPredicted RBP29.19■■■□□ 2.26
TNFRSF25-217ENST00000502730 CLEC11AQ9Y240 323 aa29.19■■■□□ 2.26
TNFRSF25-217ENST00000502730 PDE8AO60658 829 aa29.18■■■□□ 2.26
TNFRSF25-217ENST00000502730 NSFL1CQ9UNZ2 370 aaKnown RBP29.18■■■□□ 2.26
TNFRSF25-217ENST00000502730 YDJCA8MPS7 323 aa29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 ITGBL1O95965 494 aaPredicted RBP29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 RPS8P62241 208 aaKnown RBP29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 FLIIQ13045 1269 aa29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 MAP1SQ66K74 1059 aaPredicted RBP29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 JMYQ8N9B5 988 aa29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 POLLQ9UGP5 575 aa29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 SCN9AQ15858 1988 aa29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 CDHR2Q9BYE9 1310 aa29.17■■■□□ 2.26
TNFRSF25-217ENST00000502730 NEURL1BA8MQ27 555 aa29.16■■■□□ 2.26
TNFRSF25-217ENST00000502730 RAD17O75943 681 aa29.15■■■□□ 2.26
TNFRSF25-217ENST00000502730 LMOD1P29536 600 aaPredicted RBP29.15■■■□□ 2.26
TNFRSF25-217ENST00000502730 PNMA8AQ86V59 439 aaPredicted RBP29.15■■■□□ 2.26
TNFRSF25-217ENST00000502730 RIMBP2O15034 1052 aa29.14■■■□□ 2.26
TNFRSF25-217ENST00000502730 CCDC152Q4G0S7 254 aa29.14■■■□□ 2.26
TNFRSF25-217ENST00000502730 GMPSP49915 693 aaPredicted RBP29.13■■■□□ 2.25
TNFRSF25-217ENST00000502730 NEXNQ0ZGT2 675 aa29.13■■■□□ 2.25
TNFRSF25-217ENST00000502730 DBNDD1Q9H9R9 158 aa29.13■■■□□ 2.25
TNFRSF25-217ENST00000502730 C6orf229H3BNL8 230 aa29.12■■■□□ 2.25
TNFRSF25-217ENST00000502730 CTSWP56202 376 aa29.12■■■□□ 2.25
TNFRSF25-217ENST00000502730 FKBP5Q13451 457 aaPredicted RBP29.12■■■□□ 2.25
TNFRSF25-217ENST00000502730 WASHC4Q2M389 1173 aa29.12■■■□□ 2.25
TNFRSF25-217ENST00000502730 CIAPIN1Q6FI81 312 aa29.12■■■□□ 2.25
TNFRSF25-217ENST00000502730 CREBZFQ9NS37 354 aa29.12■■■□□ 2.25
TNFRSF25-217ENST00000502730 GPRC5DQ9NZD1 345 aa29.12■■■□□ 2.25
TNFRSF25-217ENST00000502730 UBE3BQ7Z3V4 1068 aa29.11■■■□□ 2.25
TNFRSF25-217ENST00000502730 CNTROBQ8N137 903 aa29.11■■■□□ 2.25
TNFRSF25-217ENST00000502730 TBC1D16Q8TBP0 767 aa29.11■■■□□ 2.25
TNFRSF25-217ENST00000502730 ZNF521Q96K83 1311 aa29.11■■■□□ 2.25
TNFRSF25-217ENST00000502730 PCNTO95613 3336 aa29.1■■■□□ 2.25
TNFRSF25-217ENST00000502730 TRPM7Q96QT4 1865 aa29.1■■■□□ 2.25
TNFRSF25-217ENST00000502730 SHTN1A0MZ66 631 aa29.1■■■□□ 2.25
TNFRSF25-217ENST00000502730 HSP90B1P14625 803 aaKnown RBP29.1■■■□□ 2.25
TNFRSF25-217ENST00000502730 FMR1Q06787 632 aaKnown RBP eCLIP29.1■■■□□ 2.25
TNFRSF25-217ENST00000502730 MKRN1Q9UHC7 482 aaKnown RBP29.1■■■□□ 2.25
TNFRSF25-217ENST00000502730 PSME4Q14997 1843 aa29.1■■■□□ 2.25
TNFRSF25-217ENST00000502730 H7C1W4 665 aa29.09■■■□□ 2.25
TNFRSF25-217ENST00000502730 DOK7Q18PE1 504 aa29.09■■■□□ 2.25
TNFRSF25-217ENST00000502730 TTLL11Q8NHH1 800 aa29.09■■■□□ 2.25
TNFRSF25-217ENST00000502730 DNAAF4Q8WXU2 420 aa29.09■■■□□ 2.25
TNFRSF25-217ENST00000502730 GREM2Q9H772 168 aa29.09■■■□□ 2.25
TNFRSF25-217ENST00000502730 GCKRQ14397 625 aa29.08■■■□□ 2.25
TNFRSF25-217ENST00000502730 KCNQ5Q9NR82 932 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms