RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 PTPRCP08575 1304 aa32.69■■■□□ 2.82
PROM1-202ENST00000502501 H7C1W4 665 aa32.68■■■□□ 2.82
PROM1-202ENST00000502501 OLFM4Q6UX06 510 aa32.68■■■□□ 2.82
PROM1-202ENST00000502501 SP8Q8IXZ3 490 aa32.68■■■□□ 2.82
PROM1-202ENST00000502501 MRPL50Q8N5N7 158 aaKnown RBP32.68■■■□□ 2.82
PROM1-202ENST00000502501 RTL5Q5HYW3 569 aaPredicted RBP32.67■■■□□ 2.82
PROM1-202ENST00000502501 TMX4Q9H1E5 349 aaPredicted RBP32.67■■■□□ 2.82
PROM1-202ENST00000502501 KDM2BQ8NHM5 1336 aa32.67■■■□□ 2.82
PROM1-202ENST00000502501 RTL9Q8NET4 1388 aa32.67■■■□□ 2.82
PROM1-202ENST00000502501 BEND3Q5T5X7 828 aa32.66■■■□□ 2.82
PROM1-202ENST00000502501 SSH1Q8WYL5 1049 aa32.66■■■□□ 2.82
PROM1-202ENST00000502501 CCDC152Q4G0S7 254 aa32.65■■■□□ 2.82
PROM1-202ENST00000502501 PLA2G12BQ9BX93 195 aa32.65■■■□□ 2.82
PROM1-202ENST00000502501 BRPF1P55201 1214 aaPredicted RBP32.64■■■□□ 2.82
PROM1-202ENST00000502501 VPS33BQ9H267 617 aa32.64■■■□□ 2.82
PROM1-202ENST00000502501 CASP7P55210 303 aa32.63■■■□□ 2.81
PROM1-202ENST00000502501 RTFDC1Q9BY42 306 aaPredicted RBP32.63■■■□□ 2.81
PROM1-202ENST00000502501 TAF1P21675 1872 aa32.63■■■□□ 2.81
PROM1-202ENST00000502501 HNRNPUQ00839 825 aaKnown RBP eCLIP32.62■■■□□ 2.81
PROM1-202ENST00000502501 LTBP1Q14766 1721 aa32.61■■■□□ 2.81
PROM1-202ENST00000502501 GLTPD2A6NH11 291 aa32.61■■■□□ 2.81
PROM1-202ENST00000502501 F6X3S4 739 aa32.61■■■□□ 2.81
PROM1-202ENST00000502501 ALDH1L1O75891 902 aa32.61■■■□□ 2.81
PROM1-202ENST00000502501 IARSP41252 1262 aaKnown RBP32.61■■■□□ 2.81
PROM1-202ENST00000502501 CTSWP56202 376 aa32.61■■■□□ 2.81
PROM1-202ENST00000502501 UBE3BQ7Z3V4 1068 aa32.61■■■□□ 2.81
PROM1-202ENST00000502501 ZBED9Q6R2W3 1325 aa32.6■■■□□ 2.81
PROM1-202ENST00000502501 ZNF526Q8TF50 670 aaPredicted RBP32.6■■■□□ 2.81
PROM1-202ENST00000502501 CELF1Q92879 486 aaKnown RBP32.6■■■□□ 2.81
PROM1-202ENST00000502501 ZNF277Q9NRM2 450 aaPredicted RBP32.6■■■□□ 2.81
PROM1-202ENST00000502501 WDR90Q96KV7 1748 aa32.6■■■□□ 2.81
PROM1-202ENST00000502501 COL4A1P02462 1669 aa32.59■■■□□ 2.81
PROM1-202ENST00000502501 SUPT20HQ8NEM7 779 aa32.59■■■□□ 2.81
PROM1-202ENST00000502501 DUOX1Q9NRD9 1551 aa32.58■■■□□ 2.81
PROM1-202ENST00000502501 RPS8P62241 208 aaKnown RBP32.58■■■□□ 2.81
PROM1-202ENST00000502501 KIF3CO14782 793 aa32.57■■■□□ 2.8
PROM1-202ENST00000502501 TTLL11Q8NHH1 800 aa32.57■■■□□ 2.8
PROM1-202ENST00000502501 DPY19L2Q6NUT2 758 aa32.56■■■□□ 2.8
PROM1-202ENST00000502501 SRCIN1Q9C0H9 1055 aa32.56■■■□□ 2.8
PROM1-202ENST00000502501 SMC4Q9NTJ3 1288 aa32.56■■■□□ 2.8
PROM1-202ENST00000502501 DPP8Q6V1X1 898 aaPredicted RBP32.55■■■□□ 2.8
PROM1-202ENST00000502501 JARID2Q92833 1246 aaPredicted RBP32.55■■■□□ 2.8
PROM1-202ENST00000502501 GRM8O00222 908 aa32.54■■■□□ 2.8
PROM1-202ENST00000502501 MPNDQ8N594 471 aa32.54■■■□□ 2.8
PROM1-202ENST00000502501 FZD9O00144 591 aa32.53■■■□□ 2.8
PROM1-202ENST00000502501 CSF1RP07333 972 aa32.53■■■□□ 2.8
PROM1-202ENST00000502501 SLC51AQ86UW1 340 aa32.53■■■□□ 2.8
PROM1-202ENST00000502501 CDC5LQ99459 802 aaKnown RBP32.53■■■□□ 2.8
PROM1-202ENST00000502501 SEC31BQ9NQW1 1179 aa32.53■■■□□ 2.8
PROM1-202ENST00000502501 COL4A5P29400 1685 aa32.53■■■□□ 2.8
PROM1-202ENST00000502501 UTYO14607 1347 aa32.52■■■□□ 2.8
PROM1-202ENST00000502501 JDP2Q8WYK2 163 aa32.52■■■□□ 2.8
PROM1-202ENST00000502501 NMRK2Q9NPI5 230 aa32.52■■■□□ 2.8
PROM1-202ENST00000502501 RARSP54136 660 aaKnown RBP32.51■■■□□ 2.79
PROM1-202ENST00000502501 PODXL2Q9NZ53 605 aa32.51■■■□□ 2.79
PROM1-202ENST00000502501 C1QTNF8P60827 252 aa32.5■■■□□ 2.79
PROM1-202ENST00000502501 SLC4A10Q6U841 1118 aa32.5■■■□□ 2.79
PROM1-202ENST00000502501 BCL2L13Q9BXK5 485 aa32.5■■■□□ 2.79
PROM1-202ENST00000502501 GREM2Q9H772 168 aa32.5■■■□□ 2.79
PROM1-202ENST00000502501 ANKRD18AQ8IVF6 992 aa32.49■■■□□ 2.79
PROM1-202ENST00000502501 L3MBTL3Q96JM7 780 aaPredicted RBP32.49■■■□□ 2.79
PROM1-202ENST00000502501 KIF16BQ96L93 1317 aa32.49■■■□□ 2.79
PROM1-202ENST00000502501 KIAA2012Q0VF49 1180 aa32.48■■■□□ 2.79
PROM1-202ENST00000502501 LARGE2Q8N3Y3 721 aa32.48■■■□□ 2.79
PROM1-202ENST00000502501 ARHGAP45Q92619 1136 aa32.47■■■□□ 2.79
PROM1-202ENST00000502501 C9orf78Q9NZ63 289 aaPredicted RBP32.47■■■□□ 2.79
PROM1-202ENST00000502501 SCN4AP35499 1836 aa32.47■■■□□ 2.79
PROM1-202ENST00000502501 PPIP5K2O43314 1243 aa32.46■■■□□ 2.79
PROM1-202ENST00000502501 TOMM70O94826 608 aa32.46■■■□□ 2.79
PROM1-202ENST00000502501 VEGFAP15692 232 aaPredicted RBP32.46■■■□□ 2.79
PROM1-202ENST00000502501 BSDC1Q9NW68 430 aaPredicted RBP32.46■■■□□ 2.79
PROM1-202ENST00000502501 FOXO4P98177 505 aa32.45■■■□□ 2.79
PROM1-202ENST00000502501 CCDC85AQ96PX6 553 aaPredicted RBP32.45■■■□□ 2.79
PROM1-202ENST00000502501 API5Q9BZZ5 524 aaKnown RBP32.45■■■□□ 2.79
PROM1-202ENST00000502501 NSFL1CQ9UNZ2 370 aaKnown RBP32.45■■■□□ 2.79
PROM1-202ENST00000502501 GPC2Q8N158 579 aa32.44■■■□□ 2.78
PROM1-202ENST00000502501 ZNF541Q9H0D2 1346 aa32.44■■■□□ 2.78
PROM1-202ENST00000502501 GPSM2P81274 684 aa32.43■■■□□ 2.78
PROM1-202ENST00000502501 NIM1KQ8IY84 436 aa32.43■■■□□ 2.78
PROM1-202ENST00000502501 RRAGCQ9HB90 399 aa32.43■■■□□ 2.78
PROM1-202ENST00000502501 ITGA6P23229 1130 aa32.42■■■□□ 2.78
PROM1-202ENST00000502501 AOC3Q16853 763 aa32.42■■■□□ 2.78
PROM1-202ENST00000502501 FAM161AQ3B820 660 aa32.42■■■□□ 2.78
PROM1-202ENST00000502501 RBM46Q8TBY0 533 aaKnown RBP32.42■■■□□ 2.78
PROM1-202ENST00000502501 NOB1Q9ULX3 412 aaKnown RBP32.42■■■□□ 2.78
PROM1-202ENST00000502501 XDHP47989 1333 aa32.42■■■□□ 2.78
PROM1-202ENST00000502501 POTECB2RU33 542 aa32.41■■■□□ 2.78
PROM1-202ENST00000502501 CCT4P50991 539 aaKnown RBP32.41■■■□□ 2.78
PROM1-202ENST00000502501 EIF6P56537 245 aaKnown RBP32.41■■■□□ 2.78
PROM1-202ENST00000502501 TBC1D16Q8TBP0 767 aa32.41■■■□□ 2.78
PROM1-202ENST00000502501 EYA3Q99504 573 aa32.41■■■□□ 2.78
PROM1-202ENST00000502501 ZNRF3Q9ULT6 936 aa32.41■■■□□ 2.78
PROM1-202ENST00000502501 SPEF2Q9C093 1822 aa32.41■■■□□ 2.78
PROM1-202ENST00000502501 IQCA1LA6NCM1 817 aa32.4■■■□□ 2.78
PROM1-202ENST00000502501 DDNO94850 711 aaPredicted RBP32.4■■■□□ 2.78
PROM1-202ENST00000502501 POLLQ9UGP5 575 aa32.4■■■□□ 2.78
PROM1-202ENST00000502501 IGHMBP2P38935 993 aaKnown RBP32.39■■■□□ 2.78
PROM1-202ENST00000502501 NBPF7P0C2Y1 421 aaPredicted RBP32.38■■■□□ 2.77
PROM1-202ENST00000502501 WASHC4Q2M389 1173 aa32.38■■■□□ 2.77
PROM1-202ENST00000502501 C16orf71Q8IYS4 520 aaPredicted RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms