RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 SUPT20HQ8NEM7 779 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
HMGCL-207ENST00000498698 STK31Q9BXU1 1019 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 HACL1Q9UJ83 578 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 MAP3K2Q9Y2U5 619 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 SALL2Q9Y467 1007 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-207ENST00000498698 COL4A5P29400 1685 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 TIAM2Q8IVF5 1701 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 PI4KAP2A4QPH2 592 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-207ENST00000498698 EPHX2P34913 555 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 G2E3Q7L622 706 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 LDHDQ86WU2 507 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 FAM9BQ8IZU0 186 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 PI4KAP1Q8N8J0 262 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 KLRG1Q96E93 195 aa12.18□□□□□ -0.46
HMGCL-207ENST00000498698 CWC25Q9NXE8 425 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-207ENST00000498698 VAMP4O75379 141 aa12.17□□□□□ -0.46
HMGCL-207ENST00000498698 SLC4A2P04920 1241 aa12.17□□□□□ -0.46
HMGCL-207ENST00000498698 IGKV5-2P06315 115 aa12.17□□□□□ -0.46
HMGCL-207ENST00000498698 KIAA2012Q0VF49 1180 aa12.17□□□□□ -0.46
HMGCL-207ENST00000498698 JARID2Q92833 1246 aaPredicted RBP12.17□□□□□ -0.46
HMGCL-207ENST00000498698 SPINK5Q9NQ38 1064 aaPredicted RBP12.17□□□□□ -0.46
HMGCL-207ENST00000498698 ZNRF3Q9ULT6 936 aa12.17□□□□□ -0.46
HMGCL-207ENST00000498698 GJA3Q9Y6H8 435 aa12.17□□□□□ -0.46
HMGCL-207ENST00000498698 PDE8AO60658 829 aa12.16□□□□□ -0.46
HMGCL-207ENST00000498698 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
HMGCL-207ENST00000498698 SCNN1DP51172 638 aa12.16□□□□□ -0.46
HMGCL-207ENST00000498698 RPS8P62241 208 aaKnown RBP12.16□□□□□ -0.46
HMGCL-207ENST00000498698 CXCL9Q07325 125 aa12.16□□□□□ -0.46
HMGCL-207ENST00000498698 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-207ENST00000498698 PNMA8AQ86V59 439 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-207ENST00000498698 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
HMGCL-207ENST00000498698 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
HMGCL-207ENST00000498698 ITGBL1O95965 494 aaPredicted RBP12.15□□□□□ -0.46
HMGCL-207ENST00000498698 EPS15P42566 896 aa12.15□□□□□ -0.46
HMGCL-207ENST00000498698 EXOSC9Q06265 439 aaKnown RBP12.15□□□□□ -0.46
HMGCL-207ENST00000498698 PASKQ96RG2 1323 aa12.14□□□□□ -0.47
HMGCL-207ENST00000498698 CDHR2Q9BYE9 1310 aa12.14□□□□□ -0.47
HMGCL-207ENST00000498698 NEURL1BA8MQ27 555 aa12.14□□□□□ -0.47
HMGCL-207ENST00000498698 GPSM2P81274 684 aa12.14□□□□□ -0.47
HMGCL-207ENST00000498698 NEXNQ0ZGT2 675 aa12.14□□□□□ -0.47
HMGCL-207ENST00000498698 FLIIQ13045 1269 aa12.14□□□□□ -0.47
HMGCL-207ENST00000498698 CWF19L2Q2TBE0 894 aaKnown RBP12.14□□□□□ -0.47
HMGCL-207ENST00000498698 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
HMGCL-207ENST00000498698 POLLQ9UGP5 575 aa12.14□□□□□ -0.47
HMGCL-207ENST00000498698 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
HMGCL-207ENST00000498698 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
HMGCL-207ENST00000498698 YDJCA8MPS7 323 aa12.13□□□□□ -0.47
HMGCL-207ENST00000498698 H7C1W4 665 aa12.13□□□□□ -0.47
HMGCL-207ENST00000498698 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-207ENST00000498698 MYH16Q9H6N6 1097 aa12.13□□□□□ -0.47
HMGCL-207ENST00000498698 CREBZFQ9NS37 354 aa12.13□□□□□ -0.47
HMGCL-207ENST00000498698 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
HMGCL-207ENST00000498698 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
HMGCL-207ENST00000498698 ZNF521Q96K83 1311 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 CACNA1SQ13698 1873 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 CCDC88AQ3V6T2 1871 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 RAD17O75943 681 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-207ENST00000498698 CTSWP56202 376 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 TNIP1Q15025 636 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 WASHC4Q2M389 1173 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 MAP1SQ66K74 1059 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-207ENST00000498698 CIAPIN1Q6FI81 312 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 USP50Q70EL3 339 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-207ENST00000498698 CNTROBQ8N137 903 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 TTLL11Q8NHH1 800 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 TBC1D16Q8TBP0 767 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 CCDC85AQ96PX6 553 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-207ENST00000498698 PODXL2Q9NZ53 605 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 ANKRD36CQ5JPF3 1778 aa12.12□□□□□ -0.47
HMGCL-207ENST00000498698 FKBP5Q13451 457 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-207ENST00000498698 GCKRQ14397 625 aa12.11□□□□□ -0.47
HMGCL-207ENST00000498698 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
HMGCL-207ENST00000498698 COL4A1P02462 1669 aa12.1□□□□□ -0.47
HMGCL-207ENST00000498698 DUOX1Q9NRD9 1551 aa12.1□□□□□ -0.47
HMGCL-207ENST00000498698 RIMBP2O15034 1052 aa12.1□□□□□ -0.47
HMGCL-207ENST00000498698 CASP7P55210 303 aa12.1□□□□□ -0.47
HMGCL-207ENST00000498698 UBE3BQ7Z3V4 1068 aa12.1□□□□□ -0.47
HMGCL-207ENST00000498698 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
HMGCL-207ENST00000498698 GPR101Q96P66 508 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-207ENST00000498698 EYA3Q99504 573 aa12.1□□□□□ -0.47
HMGCL-207ENST00000498698 ADARB2Q9NS39 739 aaKnown RBP12.1□□□□□ -0.47
HMGCL-207ENST00000498698 TMEM88BA6NKF7 163 aa12.09□□□□□ -0.47
HMGCL-207ENST00000498698 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
HMGCL-207ENST00000498698 CDC5LQ99459 802 aaKnown RBP12.09□□□□□ -0.47
HMGCL-207ENST00000498698 PLA2G12BQ9BX93 195 aa12.09□□□□□ -0.47
HMGCL-207ENST00000498698 GREM2Q9H772 168 aa12.09□□□□□ -0.47
HMGCL-207ENST00000498698 DBNDD1Q9H9R9 158 aa12.09□□□□□ -0.47
HMGCL-207ENST00000498698 ANKIB1Q9P2G1 1089 aa12.09□□□□□ -0.47
HMGCL-207ENST00000498698 RTL9Q8NET4 1388 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 F6X3S4 739 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 PSMD14O00487 310 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 UFL1O94874 794 aa12.08□□□□□ -0.48
HMGCL-207ENST00000498698 CSF1RP07333 972 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms