RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.2
HSPG2-213ENST00000498495 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.2
HSPG2-213ENST00000498495 SLC4A10Q6U841 1118 aa16.27■□□□□ 0.2
HSPG2-213ENST00000498495 ZNF277Q9NRM2 450 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-213ENST00000498495 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.19
HSPG2-213ENST00000498495 KDM2BQ8NHM5 1336 aa16.26■□□□□ 0.19
HSPG2-213ENST00000498495 BEND3Q5T5X7 828 aa16.26■□□□□ 0.19
HSPG2-213ENST00000498495 UBE3BQ7Z3V4 1068 aa16.26■□□□□ 0.19
HSPG2-213ENST00000498495 TMC4Q7Z404 712 aa16.26■□□□□ 0.19
HSPG2-213ENST00000498495 CELF1Q92879 486 aaKnown RBP16.26■□□□□ 0.19
HSPG2-213ENST00000498495 PSMD1Q99460 953 aa16.26■□□□□ 0.19
HSPG2-213ENST00000498495 IARSP41252 1262 aaKnown RBP16.25■□□□□ 0.19
HSPG2-213ENST00000498495 RPS8P62241 208 aaKnown RBP16.25■□□□□ 0.19
HSPG2-213ENST00000498495 CCDC85AQ96PX6 553 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-213ENST00000498495 BCL2L13Q9BXK5 485 aa16.25■□□□□ 0.19
HSPG2-213ENST00000498495 CCDC88AQ3V6T2 1871 aa16.25■□□□□ 0.19
HSPG2-213ENST00000498495 PTPRCP08575 1304 aa16.24■□□□□ 0.19
HSPG2-213ENST00000498495 GLTPD2A6NH11 291 aa16.24■□□□□ 0.19
HSPG2-213ENST00000498495 MPNDQ8N594 471 aa16.24■□□□□ 0.19
HSPG2-213ENST00000498495 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
HSPG2-213ENST00000498495 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
HSPG2-213ENST00000498495 DDX60Q8IY21 1712 aaKnown RBP16.24■□□□□ 0.19
HSPG2-213ENST00000498495 LAMB2P55268 1798 aa16.23■□□□□ 0.19
HSPG2-213ENST00000498495 ALDH1L1O75891 902 aa16.23■□□□□ 0.19
HSPG2-213ENST00000498495 CTSWP56202 376 aa16.23■□□□□ 0.19
HSPG2-213ENST00000498495 DPP8Q6V1X1 898 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-213ENST00000498495 SUPT20HQ8NEM7 779 aa16.23■□□□□ 0.19
HSPG2-213ENST00000498495 TTLL11Q8NHH1 800 aa16.23■□□□□ 0.19
HSPG2-213ENST00000498495 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
HSPG2-213ENST00000498495 SRCIN1Q9C0H9 1055 aa16.23■□□□□ 0.19
HSPG2-213ENST00000498495 RRAGCQ9HB90 399 aa16.23■□□□□ 0.19
HSPG2-213ENST00000498495 C9orf78Q9NZ63 289 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-213ENST00000498495 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
HSPG2-213ENST00000498495 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
HSPG2-213ENST00000498495 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
HSPG2-213ENST00000498495 NSFL1CQ9UNZ2 370 aaKnown RBP16.22■□□□□ 0.19
HSPG2-213ENST00000498495 CASP7P55210 303 aa16.21■□□□□ 0.19
HSPG2-213ENST00000498495 ANKRD18AQ8IVF6 992 aa16.21■□□□□ 0.19
HSPG2-213ENST00000498495 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
HSPG2-213ENST00000498495 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
HSPG2-213ENST00000498495 VPS33BQ9H267 617 aa16.21■□□□□ 0.19
HSPG2-213ENST00000498495 GRM8O00222 908 aa16.2■□□□□ 0.18
HSPG2-213ENST00000498495 KIF3CO14782 793 aa16.2■□□□□ 0.18
HSPG2-213ENST00000498495 PPIP5K2O43314 1243 aa16.2■□□□□ 0.18
HSPG2-213ENST00000498495 C1QTNF8P60827 252 aa16.2■□□□□ 0.18
HSPG2-213ENST00000498495 RTFDC1Q9BY42 306 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-213ENST00000498495 GREM2Q9H772 168 aa16.2■□□□□ 0.18
HSPG2-213ENST00000498495 NOB1Q9ULX3 412 aaKnown RBP16.2■□□□□ 0.18
HSPG2-213ENST00000498495 SNED1Q8TER0 1413 aa16.19■□□□□ 0.18
HSPG2-213ENST00000498495 TAF1P21675 1872 aa16.19■□□□□ 0.18
HSPG2-213ENST00000498495 DDNO94850 711 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-213ENST00000498495 RARSP54136 660 aaKnown RBP16.19■□□□□ 0.18
HSPG2-213ENST00000498495 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-213ENST00000498495 DICER1Q9UPY3 1922 aaKnown RBP16.18■□□□□ 0.18
HSPG2-213ENST00000498495 FZD9O00144 591 aa16.18■□□□□ 0.18
HSPG2-213ENST00000498495 CSF1RP07333 972 aa16.18■□□□□ 0.18
HSPG2-213ENST00000498495 VEGFAP15692 232 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-213ENST00000498495 BRPF1P55201 1214 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-213ENST00000498495 EIF6P56537 245 aaKnown RBP16.18■□□□□ 0.18
HSPG2-213ENST00000498495 AOC3Q16853 763 aa16.18■□□□□ 0.18
HSPG2-213ENST00000498495 NIM1KQ8IY84 436 aa16.18■□□□□ 0.18
HSPG2-213ENST00000498495 ZBED9Q6R2W3 1325 aa16.18■□□□□ 0.18
HSPG2-213ENST00000498495 C6orf229H3BNL8 230 aa16.17■□□□□ 0.18
HSPG2-213ENST00000498495 TOMM70O94826 608 aa16.17■□□□□ 0.18
HSPG2-213ENST00000498495 IGHMBP2P38935 993 aaKnown RBP16.17■□□□□ 0.18
HSPG2-213ENST00000498495 GPSM2P81274 684 aa16.17■□□□□ 0.18
HSPG2-213ENST00000498495 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
HSPG2-213ENST00000498495 ANKIB1Q9P2G1 1089 aa16.17■□□□□ 0.18
HSPG2-213ENST00000498495 CHMP3Q9Y3E7 222 aa16.17■□□□□ 0.18
HSPG2-213ENST00000498495 ITGA6P23229 1130 aa16.16■□□□□ 0.18
HSPG2-213ENST00000498495 FOXO4P98177 505 aa16.16■□□□□ 0.18
HSPG2-213ENST00000498495 WASHC4Q2M389 1173 aa16.16■□□□□ 0.18
HSPG2-213ENST00000498495 BSDC1Q9NW68 430 aaPredicted RBP16.16■□□□□ 0.18
HSPG2-213ENST00000498495 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 ANKRD18BA2A2Z9 1011 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 NBPF7P0C2Y1 421 aaPredicted RBP16.15■□□□□ 0.18
HSPG2-213ENST00000498495 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 IFIT5Q13325 482 aaKnown RBP16.15■□□□□ 0.18
HSPG2-213ENST00000498495 FAM161AQ3B820 660 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 LMBR1LQ6UX01 489 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 TIAM2Q8IVF5 1701 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 EYA3Q99504 573 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 MPHOSPH8Q99549 860 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 PODXL2Q9NZ53 605 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 POLLQ9UGP5 575 aa16.15■□□□□ 0.18
HSPG2-213ENST00000498495 POTECB2RU33 542 aa16.14■□□□□ 0.17
HSPG2-213ENST00000498495 IPO8O15397 1037 aaKnown RBP16.14■□□□□ 0.17
HSPG2-213ENST00000498495 CCT4P50991 539 aaKnown RBP16.14■□□□□ 0.17
HSPG2-213ENST00000498495 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
HSPG2-213ENST00000498495 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.17
HSPG2-213ENST00000498495 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
HSPG2-213ENST00000498495 GGA1Q9UJY5 639 aa16.14■□□□□ 0.17
HSPG2-213ENST00000498495 ZNRF3Q9ULT6 936 aa16.14■□□□□ 0.17
HSPG2-213ENST00000498495 MINPP1Q9UNW1 487 aa16.14■□□□□ 0.17
HSPG2-213ENST00000498495 GJA3Q9Y6H8 435 aa16.14■□□□□ 0.17
HSPG2-213ENST00000498495 ZNF541Q9H0D2 1346 aa16.14■□□□□ 0.17
HSPG2-213ENST00000498495 CCDC57Q2TAC2 916 aa16.13■□□□□ 0.17
HSPG2-213ENST00000498495 EPHA10Q5JZY3 1008 aa16.13■□□□□ 0.17
HSPG2-213ENST00000498495 GPC2Q8N158 579 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms