RNA–Protein interactions for RNA: ENST00000498439.1

CHTF18-213, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 673 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-213ENST00000498439 HYPKQ9NX55 129 aa23.68■■□□□ 1.38
CHTF18-213ENST00000498439 ANKRD36CQ5JPF3 1778 aa23.68■■□□□ 1.38
CHTF18-213ENST00000498439 CDHR2Q9BYE9 1310 aa23.67■■□□□ 1.38
CHTF18-213ENST00000498439 FOXN1O15353 648 aa23.67■■□□□ 1.38
CHTF18-213ENST00000498439 HCLS1P14317 486 aaPredicted RBP23.67■■□□□ 1.38
CHTF18-213ENST00000498439 C3orf67Q6ZVT6 689 aa23.67■■□□□ 1.38
CHTF18-213ENST00000498439 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
CHTF18-213ENST00000498439 WBP1LQ9NX94 342 aa23.67■■□□□ 1.38
CHTF18-213ENST00000498439 GPRC5DQ9NZD1 345 aa23.67■■□□□ 1.38
CHTF18-213ENST00000498439 WDR33Q9C0J8 1336 aaKnown RBP23.66■■□□□ 1.38
CHTF18-213ENST00000498439 CALD1Q05682 793 aaKnown RBP23.66■■□□□ 1.38
CHTF18-213ENST00000498439 KIAA2012Q0VF49 1180 aa23.66■■□□□ 1.38
CHTF18-213ENST00000498439 CFAP44Q96MT7 982 aa23.66■■□□□ 1.38
CHTF18-213ENST00000498439 CXCL9Q07325 125 aa23.65■■□□□ 1.38
CHTF18-213ENST00000498439 CHPF2Q9P2E5 772 aa23.65■■□□□ 1.38
CHTF18-213ENST00000498439 PCNTO95613 3336 aa23.64■■□□□ 1.37
CHTF18-213ENST00000498439 PAXIP1Q6ZW49 1069 aaPredicted RBP23.64■■□□□ 1.37
CHTF18-213ENST00000498439 ZC3H15Q8WU90 426 aaKnown RBP23.64■■□□□ 1.37
CHTF18-213ENST00000498439 TRIM35Q9UPQ4 493 aa23.64■■□□□ 1.37
CHTF18-213ENST00000498439 H7C1D1 291 aa23.63■■□□□ 1.37
CHTF18-213ENST00000498439 ADAMTS8Q9UP79 889 aa23.62■■□□□ 1.37
CHTF18-213ENST00000498439 TRPM7Q96QT4 1865 aa23.62■■□□□ 1.37
CHTF18-213ENST00000498439 TRIM28Q13263 835 aaKnown RBP23.61■■□□□ 1.37
CHTF18-213ENST00000498439 SF3B3Q15393 1217 aaKnown RBP23.61■■□□□ 1.37
CHTF18-213ENST00000498439 WASHC4Q2M389 1173 aa23.61■■□□□ 1.37
CHTF18-213ENST00000498439 EYA3Q99504 573 aa23.61■■□□□ 1.37
CHTF18-213ENST00000498439 RIC3Q7Z5B4 369 aa23.6■■□□□ 1.37
CHTF18-213ENST00000498439 ISCA1Q9BUE6 129 aa23.6■■□□□ 1.37
CHTF18-213ENST00000498439 COL4A5P29400 1685 aa23.6■■□□□ 1.37
CHTF18-213ENST00000498439 MAP2K2P36507 400 aa23.59■■□□□ 1.37
CHTF18-213ENST00000498439 GMPSP49915 693 aaPredicted RBP23.59■■□□□ 1.37
CHTF18-213ENST00000498439 GNAI1P63096 354 aa23.59■■□□□ 1.37
CHTF18-213ENST00000498439 GOLGA2Q08379 1002 aa23.59■■□□□ 1.37
CHTF18-213ENST00000498439 DUSP27Q5VZP5 1158 aa23.59■■□□□ 1.37
CHTF18-213ENST00000498439 CDC37L1Q7L3B6 337 aa23.59■■□□□ 1.37
CHTF18-213ENST00000498439 GPR101Q96P66 508 aaPredicted RBP23.59■■□□□ 1.37
CHTF18-213ENST00000498439 PGAP2Q9UHJ9 254 aa23.59■■□□□ 1.37
CHTF18-213ENST00000498439 NSFL1CQ9UNZ2 370 aaKnown RBP23.59■■□□□ 1.37
CHTF18-213ENST00000498439 TLL2Q9Y6L7 1015 aa23.59■■□□□ 1.37
CHTF18-213ENST00000498439 LAMB2P55268 1798 aa23.59■■□□□ 1.37
CHTF18-213ENST00000498439 LBX1P52954 281 aa23.58■■□□□ 1.37
CHTF18-213ENST00000498439 KRT24Q2M2I5 525 aa23.58■■□□□ 1.37
CHTF18-213ENST00000498439 FAM89AQ96GI7 184 aa23.58■■□□□ 1.37
CHTF18-213ENST00000498439 CAPNS2Q96L46 248 aa23.58■■□□□ 1.37
CHTF18-213ENST00000498439 CNOT7Q9UIV1 285 aaKnown RBP23.58■■□□□ 1.37
CHTF18-213ENST00000498439 LTBP1Q14766 1721 aa23.57■■□□□ 1.36
CHTF18-213ENST00000498439 RAD17O75943 681 aa23.57■■□□□ 1.36
CHTF18-213ENST00000498439 DPF2Q92785 391 aa23.57■■□□□ 1.36
CHTF18-213ENST00000498439 HHIPL1Q96JK4 782 aa23.57■■□□□ 1.36
CHTF18-213ENST00000498439 ATP5J2-PTCD1G3V325 749 aa23.56■■□□□ 1.36
CHTF18-213ENST00000498439 C6orf229H3BNL8 230 aa23.56■■□□□ 1.36
CHTF18-213ENST00000498439 IFT57Q9NWB7 429 aa23.56■■□□□ 1.36
CHTF18-213ENST00000498439 G3V3G9 751 aa23.55■■□□□ 1.36
CHTF18-213ENST00000498439 IRS4O14654 1257 aaPredicted RBP23.55■■□□□ 1.36
CHTF18-213ENST00000498439 CELF2O95319 508 aaKnown RBP23.55■■□□□ 1.36
CHTF18-213ENST00000498439 DDX58O95786 925 aaKnown RBP23.55■■□□□ 1.36
CHTF18-213ENST00000498439 RPS8P62241 208 aaKnown RBP23.55■■□□□ 1.36
CHTF18-213ENST00000498439 DCAF8Q5TAQ9 597 aa23.55■■□□□ 1.36
CHTF18-213ENST00000498439 CST9Q5W186 159 aa23.55■■□□□ 1.36
CHTF18-213ENST00000498439 RPS12P25398 132 aaKnown RBP23.54■■□□□ 1.36
CHTF18-213ENST00000498439 ZBTB38Q8NAP3 1195 aaPredicted RBP23.54■■□□□ 1.36
CHTF18-213ENST00000498439 ZC3H12CQ9C0D7 883 aaKnown RBP23.54■■□□□ 1.36
CHTF18-213ENST00000498439 MBIPQ9NS73 344 aa23.54■■□□□ 1.36
CHTF18-213ENST00000498439 TRAF5O00463 557 aa23.53■■□□□ 1.36
CHTF18-213ENST00000498439 CA12O43570 354 aa23.53■■□□□ 1.36
CHTF18-213ENST00000498439 GRM1Q13255 1194 aa23.53■■□□□ 1.36
CHTF18-213ENST00000498439 CYP4F22Q6NT55 531 aa23.53■■□□□ 1.36
CHTF18-213ENST00000498439 PRKRIP1Q9H875 184 aaPredicted RBP23.53■■□□□ 1.36
CHTF18-213ENST00000498439 HSPA8P11142 646 aaKnown RBP23.52■■□□□ 1.36
CHTF18-213ENST00000498439 SAPCD2Q86UD0 394 aa23.52■■□□□ 1.36
CHTF18-213ENST00000498439 CCDC191Q8NCU4 936 aa23.52■■□□□ 1.36
CHTF18-213ENST00000498439 CELF1Q92879 486 aaKnown RBP23.52■■□□□ 1.36
CHTF18-213ENST00000498439 ZNF853P0CG23 659 aa23.51■■□□□ 1.35
CHTF18-213ENST00000498439 CCDC30Q5VVM6 783 aa23.51■■□□□ 1.35
CHTF18-213ENST00000498439 APAF1O14727 1248 aa23.5■■□□□ 1.35
CHTF18-213ENST00000498439 RIMBP2O15034 1052 aa23.5■■□□□ 1.35
CHTF18-213ENST00000498439 FMR1Q06787 632 aaKnown RBP eCLIP23.5■■□□□ 1.35
CHTF18-213ENST00000498439 CCDC152Q4G0S7 254 aa23.5■■□□□ 1.35
CHTF18-213ENST00000498439 RTL5Q5HYW3 569 aaPredicted RBP23.5■■□□□ 1.35
CHTF18-213ENST00000498439 SLC51AQ86UW1 340 aa23.5■■□□□ 1.35
CHTF18-213ENST00000498439 MICALL2Q8IY33 904 aa23.5■■□□□ 1.35
CHTF18-213ENST00000498439 GLIS2Q9BZE0 524 aaPredicted RBP23.5■■□□□ 1.35
CHTF18-213ENST00000498439 TAF1P21675 1872 aa23.49■■□□□ 1.35
CHTF18-213ENST00000498439 YDJCA8MPS7 323 aa23.49■■□□□ 1.35
CHTF18-213ENST00000498439 DCPSQ96C86 337 aaKnown RBP23.49■■□□□ 1.35
CHTF18-213ENST00000498439 DBNDD1Q9H9R9 158 aa23.49■■□□□ 1.35
CHTF18-213ENST00000498439 PODXL2Q9NZ53 605 aa23.49■■□□□ 1.35
CHTF18-213ENST00000498439 DDX60Q8IY21 1712 aaKnown RBP23.49■■□□□ 1.35
CHTF18-213ENST00000498439 PSMD14O00487 310 aa23.48■■□□□ 1.35
CHTF18-213ENST00000498439 PDE8AO60658 829 aa23.48■■□□□ 1.35
CHTF18-213ENST00000498439 PCCAP05165 728 aaPredicted RBP23.48■■□□□ 1.35
CHTF18-213ENST00000498439 GPSM2P81274 684 aa23.48■■□□□ 1.35
CHTF18-213ENST00000498439 ZNF408Q9H9D4 720 aa23.48■■□□□ 1.35
CHTF18-213ENST00000498439 ANKIB1Q9P2G1 1089 aa23.48■■□□□ 1.35
CHTF18-213ENST00000498439 ECE2O60344 883 aa23.47■■□□□ 1.35
CHTF18-213ENST00000498439 HIRAP54198 1017 aaPredicted RBP23.47■■□□□ 1.35
CHTF18-213ENST00000498439 MYD88Q99836 296 aa23.47■■□□□ 1.35
CHTF18-213ENST00000498439 CWC25Q9NXE8 425 aaPredicted RBP23.47■■□□□ 1.35
CHTF18-213ENST00000498439 POLLQ9UGP5 575 aa23.47■■□□□ 1.35
CHTF18-213ENST00000498439 LRRC37AA6NMS7 1700 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms