RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SPEF2Q9C093 1822 aa10.93□□□□□ -0.66
HMGXB4-207ENST00000498212 IQCA1LA6NCM1 817 aa10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 FZD9O00144 591 aa10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 BBOX1O75936 387 aa10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 DDX58O95786 925 aaKnown RBP10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 TRIM28Q13263 835 aaKnown RBP10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 GRAPQ13588 217 aa10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 RTL5Q5HYW3 569 aaPredicted RBP10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 GRAPLQ8TC17 118 aaPredicted RBP10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 L3MBTL3Q96JM7 780 aaPredicted RBP10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 MYD88Q99836 296 aa10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 STK31Q9BXU1 1019 aa10.92□□□□□ -0.66
HMGXB4-207ENST00000498212 ADAMTSL1Q8N6G6 1762 aa10.91□□□□□ -0.66
HMGXB4-207ENST00000498212 TWISTNBQ3B726 338 aaPredicted RBP10.91□□□□□ -0.66
HMGXB4-207ENST00000498212 SP8Q8IXZ3 490 aa10.91□□□□□ -0.66
HMGXB4-207ENST00000498212 FAM9BQ8IZU0 186 aa10.91□□□□□ -0.66
HMGXB4-207ENST00000498212 LARGE2Q8N3Y3 721 aa10.91□□□□□ -0.66
HMGXB4-207ENST00000498212 SUPT20HQ8NEM7 779 aa10.91□□□□□ -0.66
HMGXB4-207ENST00000498212 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
HMGXB4-207ENST00000498212 LTBP1Q14766 1721 aa10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 COL4A1P02462 1669 aa10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 IRS4O14654 1257 aaPredicted RBP10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 PPIP5K2O43314 1243 aa10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 SF3B3Q15393 1217 aaKnown RBP10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 DPP8Q6V1X1 898 aaPredicted RBP10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 TMC4Q7Z404 712 aa10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 WDR63Q8IWG1 891 aa10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 GPC2Q8N158 579 aa10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 ZBTB38Q8NAP3 1195 aaPredicted RBP10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 CCDC191Q8NCU4 936 aa10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 METTL22Q9BUU2 404 aaPredicted RBP10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
HMGXB4-207ENST00000498212 DUOX1Q9NRD9 1551 aa10.9□□□□□ -0.67
HMGXB4-207ENST00000498212 FANCIQ9NVI1 1328 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 PCCAP05165 728 aaPredicted RBP10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 POTEJP0CG39 1038 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 HSP90B1P14625 803 aaKnown RBP10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 HTRA3P83110 453 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 AOC3Q16853 763 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 CHADLQ6NUI6 762 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 KSR2Q6VAB6 950 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 NIM1KQ8IY84 436 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 MPNDQ8N594 471 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 RTFDC1Q9BY42 306 aaPredicted RBP10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 TAF1DQ9H5J8 278 aaPredicted RBP10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 CWC25Q9NXE8 425 aaPredicted RBP10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 HACL1Q9UJ83 578 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 MAP3K2Q9Y2U5 619 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 CEP350Q5VT06 3117 aa10.89□□□□□ -0.67
HMGXB4-207ENST00000498212 PI4KAP2A4QPH2 592 aa10.88□□□□□ -0.67
HMGXB4-207ENST00000498212 LDHDQ86WU2 507 aa10.88□□□□□ -0.67
HMGXB4-207ENST00000498212 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
HMGXB4-207ENST00000498212 PI4KAP1Q8N8J0 262 aa10.88□□□□□ -0.67
HMGXB4-207ENST00000498212 CELF1Q92879 486 aaKnown RBP10.88□□□□□ -0.67
HMGXB4-207ENST00000498212 GJA3Q9Y6H8 435 aa10.88□□□□□ -0.67
HMGXB4-207ENST00000498212 PDE8AO60658 829 aa10.87□□□□□ -0.67
HMGXB4-207ENST00000498212 EPHX2P34913 555 aa10.87□□□□□ -0.67
HMGXB4-207ENST00000498212 NEXNQ0ZGT2 675 aa10.87□□□□□ -0.67
HMGXB4-207ENST00000498212 EAPPQ56P03 285 aaPredicted RBP10.87□□□□□ -0.67
HMGXB4-207ENST00000498212 G2E3Q7L622 706 aa10.87□□□□□ -0.67
HMGXB4-207ENST00000498212 PNMA8AQ86V59 439 aaPredicted RBP10.87□□□□□ -0.67
HMGXB4-207ENST00000498212 TRPM7Q96QT4 1865 aa10.87□□□□□ -0.67
HMGXB4-207ENST00000498212 PSME4Q14997 1843 aa10.86□□□□□ -0.67
HMGXB4-207ENST00000498212 VAMP4O75379 141 aa10.86□□□□□ -0.67
HMGXB4-207ENST00000498212 LMOD1P29536 600 aaPredicted RBP10.86□□□□□ -0.67
HMGXB4-207ENST00000498212 EXOSC9Q06265 439 aaKnown RBP10.86□□□□□ -0.67
HMGXB4-207ENST00000498212 KIAA2012Q0VF49 1180 aa10.86□□□□□ -0.67
HMGXB4-207ENST00000498212 FLIIQ13045 1269 aa10.86□□□□□ -0.67
HMGXB4-207ENST00000498212 KLRG1Q96E93 195 aa10.86□□□□□ -0.67
HMGXB4-207ENST00000498212 ZNRF3Q9ULT6 936 aa10.86□□□□□ -0.67
HMGXB4-207ENST00000498212 CDHR2Q9BYE9 1310 aa10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 IGKV5-2P06315 115 aa10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 SCNN1DP51172 638 aa10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 RPS8P62241 208 aaKnown RBP10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 CWF19L2Q2TBE0 894 aaKnown RBP10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 CCDC152Q4G0S7 254 aa10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 NSFL1CQ9UNZ2 370 aaKnown RBP10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
HMGXB4-207ENST00000498212 NEURL1BA8MQ27 555 aa10.84□□□□□ -0.67
HMGXB4-207ENST00000498212 GPSM2P81274 684 aa10.84□□□□□ -0.67
HMGXB4-207ENST00000498212 CXCL9Q07325 125 aa10.84□□□□□ -0.67
HMGXB4-207ENST00000498212 FKBP5Q13451 457 aaPredicted RBP10.84□□□□□ -0.67
HMGXB4-207ENST00000498212 WASHC4Q2M389 1173 aa10.84□□□□□ -0.67
HMGXB4-207ENST00000498212 SEC31BQ9NQW1 1179 aa10.84□□□□□ -0.67
HMGXB4-207ENST00000498212 SCN9AQ15858 1988 aa10.84□□□□□ -0.67
HMGXB4-207ENST00000498212 PASKQ96RG2 1323 aa10.84□□□□□ -0.67
HMGXB4-207ENST00000498212 C6orf229H3BNL8 230 aa10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 EPS15P42566 896 aa10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 CTSWP56202 376 aa10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 CIAPIN1Q6FI81 312 aa10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 ANKRD18AQ8IVF6 992 aa10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 DNAAF4Q8WXU2 420 aa10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 CCDC85AQ96PX6 553 aaPredicted RBP10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 EYA3Q99504 573 aa10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
HMGXB4-207ENST00000498212 POLLQ9UGP5 575 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms