RNA–Protein interactions for RNA: ENST00000498015.2

NEB-217, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-217ENST00000498015 NIM1KQ8IY84 436 aa9.41□□□□□ -0.9
NEB-217ENST00000498015 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
NEB-217ENST00000498015 ISCA1Q9BUE6 129 aa9.41□□□□□ -0.9
NEB-217ENST00000498015 ANKRD36CQ5JPF3 1778 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 COL4A5P29400 1685 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 GRAPQ13588 217 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 AOC3Q16853 763 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 CCDC184Q52MB2 194 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.9
NEB-217ENST00000498015 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
NEB-217ENST00000498015 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 PNMA8AQ86V59 439 aaPredicted RBP9.4□□□□□ -0.9
NEB-217ENST00000498015 SP8Q8IXZ3 490 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 MPNDQ8N594 471 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 SUPT20HQ8NEM7 779 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
NEB-217ENST00000498015 CREBZFQ9NS37 354 aa9.4□□□□□ -0.9
NEB-217ENST00000498015 PASKQ96RG2 1323 aa9.39□□□□□ -0.91
NEB-217ENST00000498015 ITGBL1O95965 494 aaPredicted RBP9.39□□□□□ -0.91
NEB-217ENST00000498015 LMOD1P29536 600 aaPredicted RBP9.39□□□□□ -0.91
NEB-217ENST00000498015 EPS15P42566 896 aa9.39□□□□□ -0.91
NEB-217ENST00000498015 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
NEB-217ENST00000498015 MAP1SQ66K74 1059 aaPredicted RBP9.39□□□□□ -0.91
NEB-217ENST00000498015 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
NEB-217ENST00000498015 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
NEB-217ENST00000498015 VPS33BQ9H267 617 aa9.39□□□□□ -0.91
NEB-217ENST00000498015 PHAXQ9H814 394 aaKnown RBP9.39□□□□□ -0.91
NEB-217ENST00000498015 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
NEB-217ENST00000498015 LAMB2P55268 1798 aa9.38□□□□□ -0.91
NEB-217ENST00000498015 IRS4O14654 1257 aaPredicted RBP9.38□□□□□ -0.91
NEB-217ENST00000498015 SCNN1DP51172 638 aa9.38□□□□□ -0.91
NEB-217ENST00000498015 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
NEB-217ENST00000498015 CNTROBQ8N137 903 aa9.38□□□□□ -0.91
NEB-217ENST00000498015 MYD88Q99836 296 aa9.38□□□□□ -0.91
NEB-217ENST00000498015 ZNRF3Q9ULT6 936 aa9.38□□□□□ -0.91
NEB-217ENST00000498015 TAF1P21675 1872 aa9.38□□□□□ -0.91
NEB-217ENST00000498015 TMEM88BA6NKF7 163 aa9.37□□□□□ -0.91
NEB-217ENST00000498015 HSPA1AP0DMV8 641 aaKnown RBP9.37□□□□□ -0.91
NEB-217ENST00000498015 HSPA1BP0DMV9 641 aaKnown RBP9.37□□□□□ -0.91
NEB-217ENST00000498015 CXCL9Q07325 125 aa9.37□□□□□ -0.91
NEB-217ENST00000498015 KIAA2012Q0VF49 1180 aa9.37□□□□□ -0.91
NEB-217ENST00000498015 SF3B3Q15393 1217 aaKnown RBP9.37□□□□□ -0.91
NEB-217ENST00000498015 CCDC30Q5VVM6 783 aa9.37□□□□□ -0.91
NEB-217ENST00000498015 TMC4Q7Z404 712 aa9.37□□□□□ -0.91
NEB-217ENST00000498015 TSPYL6Q8N831 410 aa9.37□□□□□ -0.91
NEB-217ENST00000498015 CELF1Q92879 486 aaKnown RBP9.37□□□□□ -0.91
NEB-217ENST00000498015 TSR2Q969E8 191 aaKnown RBP9.37□□□□□ -0.91
NEB-217ENST00000498015 SUPT16HQ9Y5B9 1047 aaKnown RBP9.37□□□□□ -0.91
NEB-217ENST00000498015 RAD17O75943 681 aa9.36□□□□□ -0.91
NEB-217ENST00000498015 GMPSP49915 693 aaPredicted RBP9.36□□□□□ -0.91
NEB-217ENST00000498015 COL13A1Q5TAT6 717 aaPredicted RBP9.36□□□□□ -0.91
NEB-217ENST00000498015 CIAPIN1Q6FI81 312 aa9.36□□□□□ -0.91
NEB-217ENST00000498015 ZBTB38Q8NAP3 1195 aaPredicted RBP9.36□□□□□ -0.91
NEB-217ENST00000498015 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
NEB-217ENST00000498015 CHMP4AQ9BY43 222 aa9.36□□□□□ -0.91
NEB-217ENST00000498015 NSFL1CQ9UNZ2 370 aaKnown RBP9.36□□□□□ -0.91
NEB-217ENST00000498015 ADAMTSL1Q8N6G6 1762 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 C6orf229H3BNL8 230 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 DDX58O95786 925 aaKnown RBP9.35□□□□□ -0.91
NEB-217ENST00000498015 HSP90B1P14625 803 aaKnown RBP9.35□□□□□ -0.91
NEB-217ENST00000498015 RPS8P62241 208 aaKnown RBP9.35□□□□□ -0.91
NEB-217ENST00000498015 GPSM2P81274 684 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 TNIP1Q15025 636 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 CCDC27Q2M243 656 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 WASHC4Q2M389 1173 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 USP50Q70EL3 339 aaPredicted RBP9.35□□□□□ -0.91
NEB-217ENST00000498015 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 DDX60Q8IY21 1712 aaKnown RBP9.35□□□□□ -0.91
NEB-217ENST00000498015 CCDC191Q8NCU4 936 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 METTL22Q9BUU2 404 aaPredicted RBP9.35□□□□□ -0.91
NEB-217ENST00000498015 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 ADARB2Q9NS39 739 aaKnown RBP9.35□□□□□ -0.91
NEB-217ENST00000498015 CWC25Q9NXE8 425 aaPredicted RBP9.35□□□□□ -0.91
NEB-217ENST00000498015 GPRC5DQ9NZD1 345 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 PCNTO95613 3336 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 CNTNAP1P78357 1384 aa9.35□□□□□ -0.91
NEB-217ENST00000498015 LTBP1Q14766 1721 aa9.34□□□□□ -0.91
NEB-217ENST00000498015 RIMBP2O15034 1052 aa9.34□□□□□ -0.91
NEB-217ENST00000498015 PCCAP05165 728 aaPredicted RBP9.34□□□□□ -0.91
NEB-217ENST00000498015 VEGFBP49765 207 aa9.34□□□□□ -0.91
NEB-217ENST00000498015 FMR1Q06787 632 aaKnown RBP eCLIP9.34□□□□□ -0.91
NEB-217ENST00000498015 CCDC85AQ96PX6 553 aaPredicted RBP9.34□□□□□ -0.91
NEB-217ENST00000498015 STK31Q9BXU1 1019 aa9.34□□□□□ -0.91
NEB-217ENST00000498015 SEC31BQ9NQW1 1179 aa9.34□□□□□ -0.91
NEB-217ENST00000498015 ABT1Q9ULW3 272 aaKnown RBP9.34□□□□□ -0.91
NEB-217ENST00000498015 MAP3K2Q9Y2U5 619 aa9.34□□□□□ -0.91
NEB-217ENST00000498015 PI4KAP2A4QPH2 592 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 YDJCA8MPS7 323 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 TRAF5O00463 557 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 PDE8AO60658 829 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 NPM3O75607 178 aaKnown RBP9.33□□□□□ -0.92
NEB-217ENST00000498015 DEFB115Q30KQ5 88 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 TWISTNBQ3B726 338 aaPredicted RBP9.33□□□□□ -0.92
NEB-217ENST00000498015 CCDC152Q4G0S7 254 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 KSR2Q6VAB6 950 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 PI4KAP1Q8N8J0 262 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 GPR101Q96P66 508 aaPredicted RBP9.33□□□□□ -0.92
NEB-217ENST00000498015 DBNDD1Q9H9R9 158 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 POLLQ9UGP5 575 aa9.33□□□□□ -0.92
NEB-217ENST00000498015 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms