RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 IFT57Q9NWB7 429 aa15.25■□□□□ 0.03
NUDCD3-211ENST00000497978 GJA3Q9Y6H8 435 aa15.25■□□□□ 0.03
NUDCD3-211ENST00000497978 PPIP5K2O43314 1243 aa15.24■□□□□ 0.03
NUDCD3-211ENST00000497978 ZNF853P0CG23 659 aa15.24■□□□□ 0.03
NUDCD3-211ENST00000497978 SP8Q8IXZ3 490 aa15.24■□□□□ 0.03
NUDCD3-211ENST00000497978 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
NUDCD3-211ENST00000497978 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
NUDCD3-211ENST00000497978 LAMB2P55268 1798 aa15.22■□□□□ 0.03
NUDCD3-211ENST00000497978 GOLGA2Q08379 1002 aa15.22■□□□□ 0.03
NUDCD3-211ENST00000497978 GRAPQ13588 217 aa15.22■□□□□ 0.03
NUDCD3-211ENST00000497978 AOC3Q16853 763 aa15.22■□□□□ 0.03
NUDCD3-211ENST00000497978 TMC4Q7Z404 712 aa15.22■□□□□ 0.03
NUDCD3-211ENST00000497978 MPNDQ8N594 471 aa15.22■□□□□ 0.03
NUDCD3-211ENST00000497978 GRAPLQ8TC17 118 aaPredicted RBP15.22■□□□□ 0.03
NUDCD3-211ENST00000497978 ISCA1Q9BUE6 129 aa15.22■□□□□ 0.03
NUDCD3-211ENST00000497978 PASKQ96RG2 1323 aa15.21■□□□□ 0.03
NUDCD3-211ENST00000497978 ATP5J2-PTCD1G3V325 749 aa15.21■□□□□ 0.03
NUDCD3-211ENST00000497978 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
NUDCD3-211ENST00000497978 SLC51AQ86UW1 340 aa15.21■□□□□ 0.03
NUDCD3-211ENST00000497978 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
NUDCD3-211ENST00000497978 RTFDC1Q9BY42 306 aaPredicted RBP15.21■□□□□ 0.03
NUDCD3-211ENST00000497978 COL4A5P29400 1685 aa15.21■□□□□ 0.03
NUDCD3-211ENST00000497978 TMEM88BA6NKF7 163 aa15.2■□□□□ 0.02
NUDCD3-211ENST00000497978 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
NUDCD3-211ENST00000497978 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
NUDCD3-211ENST00000497978 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
NUDCD3-211ENST00000497978 FAM89AQ96GI7 184 aa15.2■□□□□ 0.02
NUDCD3-211ENST00000497978 MKRN1Q9UHC7 482 aaKnown RBP15.2■□□□□ 0.02
NUDCD3-211ENST00000497978 ZNRF3Q9ULT6 936 aa15.2■□□□□ 0.02
NUDCD3-211ENST00000497978 HSP90B1P14625 803 aaKnown RBP15.19■□□□□ 0.02
NUDCD3-211ENST00000497978 ZEB1P37275 1124 aaPredicted RBP15.19■□□□□ 0.02
NUDCD3-211ENST00000497978 TRIM28Q13263 835 aaKnown RBP15.19■□□□□ 0.02
NUDCD3-211ENST00000497978 MAP1SQ66K74 1059 aaPredicted RBP15.19■□□□□ 0.02
NUDCD3-211ENST00000497978 ADAMTSL1Q8N6G6 1762 aa15.19■□□□□ 0.02
NUDCD3-211ENST00000497978 DDX58O95786 925 aaKnown RBP15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 EPS15P42566 896 aa15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 SCNN1DP51172 638 aa15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 KIAA2012Q0VF49 1180 aa15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 SF3B3Q15393 1217 aaKnown RBP15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 CCDC30Q5VVM6 783 aa15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
NUDCD3-211ENST00000497978 DDX60Q8IY21 1712 aaKnown RBP15.17■□□□□ 0.02
NUDCD3-211ENST00000497978 CNTNAP1P78357 1384 aa15.17■□□□□ 0.02
NUDCD3-211ENST00000497978 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
NUDCD3-211ENST00000497978 TNIP1Q15025 636 aa15.17■□□□□ 0.02
NUDCD3-211ENST00000497978 RTL5Q5HYW3 569 aaPredicted RBP15.17■□□□□ 0.02
NUDCD3-211ENST00000497978 C8orf58Q8NAV2 365 aa15.17■□□□□ 0.02
NUDCD3-211ENST00000497978 PHAXQ9H814 394 aaKnown RBP15.17■□□□□ 0.02
NUDCD3-211ENST00000497978 CXCL9Q07325 125 aa15.16■□□□□ 0.02
NUDCD3-211ENST00000497978 CIAPIN1Q6FI81 312 aa15.16■□□□□ 0.02
NUDCD3-211ENST00000497978 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
NUDCD3-211ENST00000497978 MYD88Q99836 296 aa15.16■□□□□ 0.02
NUDCD3-211ENST00000497978 GPRC5DQ9NZD1 345 aa15.16■□□□□ 0.02
NUDCD3-211ENST00000497978 TAF1P21675 1872 aa15.16■□□□□ 0.02
NUDCD3-211ENST00000497978 LTBP1Q14766 1721 aa15.15■□□□□ 0.02
NUDCD3-211ENST00000497978 COL13A1Q5TAT6 717 aaPredicted RBP15.15■□□□□ 0.02
NUDCD3-211ENST00000497978 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
NUDCD3-211ENST00000497978 CELF1Q92879 486 aaKnown RBP15.15■□□□□ 0.02
NUDCD3-211ENST00000497978 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
NUDCD3-211ENST00000497978 ADARB2Q9NS39 739 aaKnown RBP15.15■□□□□ 0.02
NUDCD3-211ENST00000497978 NSFL1CQ9UNZ2 370 aaKnown RBP15.15■□□□□ 0.02
NUDCD3-211ENST00000497978 GMPSP49915 693 aaPredicted RBP15.14■□□□□ 0.01
NUDCD3-211ENST00000497978 CCDC27Q2M243 656 aa15.14■□□□□ 0.01
NUDCD3-211ENST00000497978 WASHC4Q2M389 1173 aa15.14■□□□□ 0.01
NUDCD3-211ENST00000497978 STK31Q9BXU1 1019 aa15.14■□□□□ 0.01
NUDCD3-211ENST00000497978 CWC25Q9NXE8 425 aaPredicted RBP15.14■□□□□ 0.01
NUDCD3-211ENST00000497978 CDHR2Q9BYE9 1310 aa15.14■□□□□ 0.01
NUDCD3-211ENST00000497978 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 LRRC37AA6NMS7 1700 aa15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 C6orf229H3BNL8 230 aa15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 RAD17O75943 681 aa15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 PCCAP05165 728 aaPredicted RBP15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 RPS8P62241 208 aaKnown RBP15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 DEFB115Q30KQ5 88 aa15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 EYA3Q99504 573 aa15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 METTL22Q9BUU2 404 aaPredicted RBP15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 ABT1Q9ULW3 272 aaKnown RBP15.13■□□□□ 0.01
NUDCD3-211ENST00000497978 ANP32CO43423 234 aa15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 PDE8AO60658 829 aa15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 VEGFBP49765 207 aa15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 CCDC152Q4G0S7 254 aa15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 TNS4Q8IZW8 715 aa15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 TSPYL6Q8N831 410 aa15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 MRS2Q9HD23 443 aa15.12■□□□□ 0.01
NUDCD3-211ENST00000497978 RASSF10A6NK89 507 aa15.11■□□□□ 0.01
NUDCD3-211ENST00000497978 RIMBP2O15034 1052 aa15.11■□□□□ 0.01
NUDCD3-211ENST00000497978 GPSM2P81274 684 aa15.11■□□□□ 0.01
NUDCD3-211ENST00000497978 NEXNQ0ZGT2 675 aa15.11■□□□□ 0.01
NUDCD3-211ENST00000497978 KSR2Q6VAB6 950 aa15.11■□□□□ 0.01
NUDCD3-211ENST00000497978 AIDAQ96BJ3 306 aa15.11■□□□□ 0.01
NUDCD3-211ENST00000497978 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
NUDCD3-211ENST00000497978 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
NUDCD3-211ENST00000497978 YDJCA8MPS7 323 aa15.1■□□□□ 0.01
NUDCD3-211ENST00000497978 H7C1D1 291 aa15.1■□□□□ 0.01
NUDCD3-211ENST00000497978 TWISTNBQ3B726 338 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms