RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 TMX4Q9H1E5 349 aaPredicted RBP23.36■■□□□ 1.33
ELL3-208ENST00000497700 PRDM10Q9NQV6 1147 aa23.36■■□□□ 1.33
ELL3-208ENST00000497700 GPRC5DQ9NZD1 345 aa23.36■■□□□ 1.33
ELL3-208ENST00000497700 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
ELL3-208ENST00000497700 CHL1O00533 1208 aa23.35■■□□□ 1.33
ELL3-208ENST00000497700 GMPSP49915 693 aaPredicted RBP23.35■■□□□ 1.33
ELL3-208ENST00000497700 HSP90AB3PQ58FF7 597 aa23.35■■□□□ 1.33
ELL3-208ENST00000497700 DPP8Q6V1X1 898 aaPredicted RBP23.35■■□□□ 1.33
ELL3-208ENST00000497700 PAXIP1Q6ZW49 1069 aaPredicted RBP23.35■■□□□ 1.33
ELL3-208ENST00000497700 USP50Q70EL3 339 aaPredicted RBP23.35■■□□□ 1.33
ELL3-208ENST00000497700 RTFDC1Q9BY42 306 aaPredicted RBP23.35■■□□□ 1.33
ELL3-208ENST00000497700 ZNRF3Q9ULT6 936 aa23.35■■□□□ 1.33
ELL3-208ENST00000497700 THSD7BQ9C0I4 1608 aa23.34■■□□□ 1.33
ELL3-208ENST00000497700 LRRC37AA6NMS7 1700 aa23.34■■□□□ 1.33
ELL3-208ENST00000497700 RAD17O75943 681 aa23.34■■□□□ 1.33
ELL3-208ENST00000497700 CST9Q5W186 159 aa23.34■■□□□ 1.33
ELL3-208ENST00000497700 MPNDQ8N594 471 aa23.34■■□□□ 1.33
ELL3-208ENST00000497700 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.33
ELL3-208ENST00000497700 SHTN1A0MZ66 631 aa23.33■■□□□ 1.33
ELL3-208ENST00000497700 HSPA8P11142 646 aaKnown RBP23.33■■□□□ 1.33
ELL3-208ENST00000497700 CYP4F22Q6NT55 531 aa23.33■■□□□ 1.33
ELL3-208ENST00000497700 SP8Q8IXZ3 490 aa23.33■■□□□ 1.33
ELL3-208ENST00000497700 BBOX1O75936 387 aa23.32■■□□□ 1.32
ELL3-208ENST00000497700 GRAPQ13588 217 aa23.32■■□□□ 1.32
ELL3-208ENST00000497700 DDX46Q7L014 1031 aaKnown RBP23.32■■□□□ 1.32
ELL3-208ENST00000497700 SUPT20HQ8NEM7 779 aa23.32■■□□□ 1.32
ELL3-208ENST00000497700 GRAPLQ8TC17 118 aaPredicted RBP23.32■■□□□ 1.32
ELL3-208ENST00000497700 CAPNS2Q96L46 248 aa23.32■■□□□ 1.32
ELL3-208ENST00000497700 ADARB2Q9NS39 739 aaKnown RBP23.32■■□□□ 1.32
ELL3-208ENST00000497700 ATP5J2-PTCD1G3V325 749 aa23.31■■□□□ 1.32
ELL3-208ENST00000497700 KIAA2012Q0VF49 1180 aa23.31■■□□□ 1.32
ELL3-208ENST00000497700 RTL5Q5HYW3 569 aaPredicted RBP23.31■■□□□ 1.32
ELL3-208ENST00000497700 HDGFL1Q5TGJ6 251 aa23.31■■□□□ 1.32
ELL3-208ENST00000497700 CIAPIN1Q6FI81 312 aa23.31■■□□□ 1.32
ELL3-208ENST00000497700 YTHDC1Q96MU7 727 aaKnown RBP23.31■■□□□ 1.32
ELL3-208ENST00000497700 GLIS2Q9BZE0 524 aaPredicted RBP23.31■■□□□ 1.32
ELL3-208ENST00000497700 YDJCA8MPS7 323 aa23.3■■□□□ 1.32
ELL3-208ENST00000497700 RUNDC1Q96C34 613 aa23.3■■□□□ 1.32
ELL3-208ENST00000497700 TRPM4Q8TD43 1214 aa23.29■■□□□ 1.32
ELL3-208ENST00000497700 FAM89AQ96GI7 184 aa23.29■■□□□ 1.32
ELL3-208ENST00000497700 VPS33BQ9H267 617 aa23.29■■□□□ 1.32
ELL3-208ENST00000497700 HIRAP54198 1017 aaPredicted RBP23.28■■□□□ 1.32
ELL3-208ENST00000497700 WDR43Q15061 677 aaKnown RBP eCLIP23.28■■□□□ 1.32
ELL3-208ENST00000497700 PLBD2Q8NHP8 589 aa23.28■■□□□ 1.32
ELL3-208ENST00000497700 CELF1Q92879 486 aaKnown RBP23.28■■□□□ 1.32
ELL3-208ENST00000497700 BCL2L13Q9BXK5 485 aa23.28■■□□□ 1.32
ELL3-208ENST00000497700 ADAMTS8Q9UP79 889 aa23.28■■□□□ 1.32
ELL3-208ENST00000497700 AOC2O75106 756 aa23.27■■□□□ 1.32
ELL3-208ENST00000497700 MAP2K1Q02750 393 aaPredicted RBP23.27■■□□□ 1.32
ELL3-208ENST00000497700 FAM9BQ8IZU0 186 aa23.27■■□□□ 1.32
ELL3-208ENST00000497700 ISCA1Q9BUE6 129 aa23.27■■□□□ 1.32
ELL3-208ENST00000497700 TLL2Q9Y6L7 1015 aa23.27■■□□□ 1.32
ELL3-208ENST00000497700 CELF2O95319 508 aaKnown RBP23.26■■□□□ 1.31
ELL3-208ENST00000497700 DLK2Q6UY11 383 aa23.26■■□□□ 1.31
ELL3-208ENST00000497700 ANKRD13DQ6ZTN6 518 aa23.26■■□□□ 1.31
ELL3-208ENST00000497700 TSKSQ9UJT2 592 aa23.26■■□□□ 1.31
ELL3-208ENST00000497700 ZBTB12Q9Y330 459 aaPredicted RBP23.26■■□□□ 1.31
ELL3-208ENST00000497700 DUSP27Q5VZP5 1158 aa23.25■■□□□ 1.31
ELL3-208ENST00000497700 GPR101Q96P66 508 aaPredicted RBP23.25■■□□□ 1.31
ELL3-208ENST00000497700 ZNF408Q9H9D4 720 aa23.25■■□□□ 1.31
ELL3-208ENST00000497700 RIMBP2O15034 1052 aa23.24■■□□□ 1.31
ELL3-208ENST00000497700 ECE1P42892 770 aa23.24■■□□□ 1.31
ELL3-208ENST00000497700 DBNDD1Q9H9R9 158 aa23.24■■□□□ 1.31
ELL3-208ENST00000497700 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
ELL3-208ENST00000497700 DBF4Q9UBU7 674 aaPredicted RBP23.24■■□□□ 1.31
ELL3-208ENST00000497700 POLR2AP24928 1970 aaKnown RBP23.23■■□□□ 1.31
ELL3-208ENST00000497700 TNIP1Q15025 636 aa23.23■■□□□ 1.31
ELL3-208ENST00000497700 CNOT7Q9UIV1 285 aaKnown RBP23.23■■□□□ 1.31
ELL3-208ENST00000497700 NSFL1CQ9UNZ2 370 aaKnown RBP23.23■■□□□ 1.31
ELL3-208ENST00000497700 SCN9AQ15858 1988 aa23.22■■□□□ 1.31
ELL3-208ENST00000497700 GPSM2P81274 684 aa23.22■■□□□ 1.31
ELL3-208ENST00000497700 SAPCD2Q86UD0 394 aa23.22■■□□□ 1.31
ELL3-208ENST00000497700 MICALL2Q8IY33 904 aa23.22■■□□□ 1.31
ELL3-208ENST00000497700 KCNQ5Q9NR82 932 aa23.22■■□□□ 1.31
ELL3-208ENST00000497700 PSMD14O00487 310 aa23.21■■□□□ 1.31
ELL3-208ENST00000497700 HOXB7P09629 217 aa23.21■■□□□ 1.31
ELL3-208ENST00000497700 SF3B3Q15393 1217 aaKnown RBP23.21■■□□□ 1.31
ELL3-208ENST00000497700 CFAP44Q96MT7 982 aa23.21■■□□□ 1.31
ELL3-208ENST00000497700 POLLQ9UGP5 575 aa23.21■■□□□ 1.31
ELL3-208ENST00000497700 PGAP2Q9UHJ9 254 aa23.21■■□□□ 1.31
ELL3-208ENST00000497700 CDHR2Q9BYE9 1310 aa23.21■■□□□ 1.31
ELL3-208ENST00000497700 C6orf229H3BNL8 230 aa23.2■■□□□ 1.3
ELL3-208ENST00000497700 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
ELL3-208ENST00000497700 IRS4O14654 1257 aaPredicted RBP23.2■■□□□ 1.3
ELL3-208ENST00000497700 EGFRP00533 1210 aa23.2■■□□□ 1.3
ELL3-208ENST00000497700 DOK7Q18PE1 504 aa23.2■■□□□ 1.3
ELL3-208ENST00000497700 WASHC4Q2M389 1173 aa23.2■■□□□ 1.3
ELL3-208ENST00000497700 SAMD7Q7Z3H4 446 aa23.2■■□□□ 1.3
ELL3-208ENST00000497700 PHAXQ9H814 394 aaKnown RBP23.2■■□□□ 1.3
ELL3-208ENST00000497700 TMC4Q7Z404 712 aa23.19■■□□□ 1.3
ELL3-208ENST00000497700 JARID2Q92833 1246 aaPredicted RBP23.19■■□□□ 1.3
ELL3-208ENST00000497700 ABHD8Q96I13 439 aa23.19■■□□□ 1.3
ELL3-208ENST00000497700 HYPKQ9NX55 129 aa23.19■■□□□ 1.3
ELL3-208ENST00000497700 RTL9Q8NET4 1388 aa23.18■■□□□ 1.3
ELL3-208ENST00000497700 TBC1D10BQ4KMP7 808 aaPredicted RBP23.18■■□□□ 1.3
ELL3-208ENST00000497700 USP48Q86UV5 1035 aa23.18■■□□□ 1.3
ELL3-208ENST00000497700 BEGAINQ9BUH8 593 aa23.18■■□□□ 1.3
ELL3-208ENST00000497700 SEC31BQ9NQW1 1179 aa23.18■■□□□ 1.3
ELL3-208ENST00000497700 CASP8AP2Q9UKL3 1982 aa23.18■■□□□ 1.3
ELL3-208ENST00000497700 H7C1D1 291 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms