RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 CYP4F22Q6NT55 531 aa24.87■■□□□ 1.57
ACTN4-208ENST00000497637 TEX13AQ9BXU3 409 aaPredicted RBP24.87■■□□□ 1.57
ACTN4-208ENST00000497637 TNRC18O15417 2968 aaPredicted RBP24.86■■□□□ 1.57
ACTN4-208ENST00000497637 ZBTB7BO15156 539 aaPredicted RBP24.86■■□□□ 1.57
ACTN4-208ENST00000497637 GRM1Q13255 1194 aa24.86■■□□□ 1.57
ACTN4-208ENST00000497637 THSD7BQ9C0I4 1608 aa24.86■■□□□ 1.57
ACTN4-208ENST00000497637 SCN11AQ9UI33 1791 aa24.85■■□□□ 1.57
ACTN4-208ENST00000497637 KCNQ3O43525 872 aa24.85■■□□□ 1.57
ACTN4-208ENST00000497637 NPR1P16066 1061 aa24.85■■□□□ 1.57
ACTN4-208ENST00000497637 TBC1D2BQ9UPU7 963 aa24.85■■□□□ 1.57
ACTN4-208ENST00000497637 KDM3BQ7LBC6 1761 aa24.85■■□□□ 1.57
ACTN4-208ENST00000497637 COL11A2P13942 1736 aaPredicted RBP24.84■■□□□ 1.57
ACTN4-208ENST00000497637 LMOD1P29536 600 aaPredicted RBP24.84■■□□□ 1.57
ACTN4-208ENST00000497637 HDAC1Q13547 482 aaPredicted RBP24.84■■□□□ 1.57
ACTN4-208ENST00000497637 TTC5Q8N0Z6 440 aa24.84■■□□□ 1.57
ACTN4-208ENST00000497637 TSKSQ9UJT2 592 aa24.84■■□□□ 1.57
ACTN4-208ENST00000497637 TLL2Q9Y6L7 1015 aa24.84■■□□□ 1.57
ACTN4-208ENST00000497637 MRC1P22897 1456 aa24.83■■□□□ 1.57
ACTN4-208ENST00000497637 IL6STP40189 918 aaPredicted RBP24.83■■□□□ 1.57
ACTN4-208ENST00000497637 JDP2Q8WYK2 163 aa24.83■■□□□ 1.57
ACTN4-208ENST00000497637 HEG1Q9ULI3 1381 aa24.82■■□□□ 1.56
ACTN4-208ENST00000497637 IARSP41252 1262 aaKnown RBP24.82■■□□□ 1.56
ACTN4-208ENST00000497637 DGKZQ13574 1117 aa24.82■■□□□ 1.56
ACTN4-208ENST00000497637 G2E3Q7L622 706 aa24.82■■□□□ 1.56
ACTN4-208ENST00000497637 HDGFL1Q5TGJ6 251 aa24.81■■□□□ 1.56
ACTN4-208ENST00000497637 ZNF330Q9Y3S2 320 aaPredicted RBP24.81■■□□□ 1.56
ACTN4-208ENST00000497637 CST9Q5W186 159 aa24.8■■□□□ 1.56
ACTN4-208ENST00000497637 EIF6P56537 245 aaKnown RBP24.79■■□□□ 1.56
ACTN4-208ENST00000497637 HHIPL1Q96JK4 782 aa24.79■■□□□ 1.56
ACTN4-208ENST00000497637 SIPA1L3O60292 1781 aaPredicted RBP24.78■■□□□ 1.56
ACTN4-208ENST00000497637 KLRG2A4D1S0 409 aaPredicted RBP24.78■■□□□ 1.56
ACTN4-208ENST00000497637 CAMTA2O94983 1202 aa24.78■■□□□ 1.56
ACTN4-208ENST00000497637 FLIIQ13045 1269 aa24.78■■□□□ 1.56
ACTN4-208ENST00000497637 PRPF38BQ5VTL8 546 aaKnown RBP24.78■■□□□ 1.56
ACTN4-208ENST00000497637 USP50Q70EL3 339 aaPredicted RBP24.78■■□□□ 1.56
ACTN4-208ENST00000497637 NBPF5PQ86XG9 351 aaPredicted RBP24.78■■□□□ 1.56
ACTN4-208ENST00000497637 SYNE4Q8N205 404 aa24.78■■□□□ 1.56
ACTN4-208ENST00000497637 AOC2O75106 756 aa24.77■■□□□ 1.56
ACTN4-208ENST00000497637 ALDH1B1P30837 517 aa24.77■■□□□ 1.56
ACTN4-208ENST00000497637 RBM19Q9Y4C8 960 aaKnown RBP24.77■■□□□ 1.56
ACTN4-208ENST00000497637 ARFGEF2Q9Y6D5 1785 aa24.77■■□□□ 1.56
ACTN4-208ENST00000497637 CCT4P50991 539 aaKnown RBP24.76■■□□□ 1.55
ACTN4-208ENST00000497637 CLEC4GQ6UXB4 293 aa24.76■■□□□ 1.55
ACTN4-208ENST00000497637 PSMD1Q99460 953 aa24.76■■□□□ 1.55
ACTN4-208ENST00000497637 SAPCD2Q86UD0 394 aa24.75■■□□□ 1.55
ACTN4-208ENST00000497637 NECTIN2Q92692 538 aa24.75■■□□□ 1.55
ACTN4-208ENST00000497637 GJA3Q9Y6H8 435 aa24.75■■□□□ 1.55
ACTN4-208ENST00000497637 ZNF790Q6PG37 636 aa24.74■■□□□ 1.55
ACTN4-208ENST00000497637 TPTE2Q6XPS3 522 aa24.74■■□□□ 1.55
ACTN4-208ENST00000497637 SCN7AQ01118 1682 aa24.74■■□□□ 1.55
ACTN4-208ENST00000497637 EIF2S2P20042 333 aaKnown RBP24.73■■□□□ 1.55
ACTN4-208ENST00000497637 FMR1Q06787 632 aaKnown RBP eCLIP24.73■■□□□ 1.559e-7■■□□□ 13
ACTN4-208ENST00000497637 CC2D2BQ6DHV5 1058 aa24.73■■□□□ 1.55
ACTN4-208ENST00000497637 SKAP1Q86WV1 359 aa24.73■■□□□ 1.55
ACTN4-208ENST00000497637 ZNF496Q96IT1 587 aaPredicted RBP24.73■■□□□ 1.55
ACTN4-208ENST00000497637 ZNF652Q9Y2D9 606 aa24.73■■□□□ 1.55
ACTN4-208ENST00000497637 CACNA1FO60840 1977 aa24.73■■□□□ 1.55
ACTN4-208ENST00000497637 TRAF5O00463 557 aa24.72■■□□□ 1.55
ACTN4-208ENST00000497637 EPS15P42566 896 aa24.72■■□□□ 1.55
ACTN4-208ENST00000497637 GRIPAP1Q4V328 841 aa24.72■■□□□ 1.55
ACTN4-208ENST00000497637 DZIP3Q86Y13 1208 aaKnown RBP24.72■■□□□ 1.55
ACTN4-208ENST00000497637 SMC5Q8IY18 1101 aa24.72■■□□□ 1.55
ACTN4-208ENST00000497637 LTBP1Q14766 1721 aa24.72■■□□□ 1.55
ACTN4-208ENST00000497637 SCNN1DP51172 638 aa24.71■■□□□ 1.55
ACTN4-208ENST00000497637 FKBP5Q13451 457 aaPredicted RBP24.71■■□□□ 1.55
ACTN4-208ENST00000497637 OLFM4Q6UX06 510 aa24.71■■□□□ 1.55
ACTN4-208ENST00000497637 F6X3S4 739 aa24.7■■□□□ 1.54
ACTN4-208ENST00000497637 CASP8AP2Q9UKL3 1982 aa24.7■■□□□ 1.54
ACTN4-208ENST00000497637 CELF2O95319 508 aaKnown RBP24.69■■□□□ 1.54
ACTN4-208ENST00000497637 CHPF2Q9P2E5 772 aa24.69■■□□□ 1.54
ACTN4-208ENST00000497637 DBF4Q9UBU7 674 aaPredicted RBP24.69■■□□□ 1.54
ACTN4-208ENST00000497637 CACNA1SQ13698 1873 aa24.68■■□□□ 1.54
ACTN4-208ENST00000497637 RGL2O15211 777 aa24.68■■□□□ 1.54
ACTN4-208ENST00000497637 A1BGP04217 495 aa24.68■■□□□ 1.54
ACTN4-208ENST00000497637 NOGQ13253 232 aa24.68■■□□□ 1.54
ACTN4-208ENST00000497637 CIAPIN1Q6FI81 312 aa24.67■■□□□ 1.54
ACTN4-208ENST00000497637 FMNL2Q96PY5 1086 aa24.67■■□□□ 1.54
ACTN4-208ENST00000497637 PHAXQ9H814 394 aaKnown RBP24.67■■□□□ 1.54
ACTN4-208ENST00000497637 UBR2Q8IWV8 1755 aa24.67■■□□□ 1.54
ACTN4-208ENST00000497637 PDE4AP27815 886 aa24.66■■□□□ 1.54
ACTN4-208ENST00000497637 RGS3P49796 1198 aa24.66■■□□□ 1.54
ACTN4-208ENST00000497637 SLC4A10Q6U841 1118 aa24.66■■□□□ 1.54
ACTN4-208ENST00000497637 C1orf115Q9H7X2 142 aa24.66■■□□□ 1.54
ACTN4-208ENST00000497637 ADARB2Q9NS39 739 aaKnown RBP24.66■■□□□ 1.54
ACTN4-208ENST00000497637 TRPM7Q96QT4 1865 aa24.66■■□□□ 1.54
ACTN4-208ENST00000497637 SOX10P56693 466 aa24.65■■□□□ 1.54
ACTN4-208ENST00000497637 SIRT2Q8IXJ6 389 aa24.65■■□□□ 1.54
ACTN4-208ENST00000497637 RPAP2Q8IXW5 612 aaPredicted RBP24.65■■□□□ 1.54
ACTN4-208ENST00000497637 LARGE2Q8N3Y3 721 aa24.65■■□□□ 1.54
ACTN4-208ENST00000497637 SNRPA1P09661 255 aaKnown RBP24.64■■□□□ 1.54
ACTN4-208ENST00000497637 ANKRD44Q8N8A2 993 aa24.64■■□□□ 1.54
ACTN4-208ENST00000497637 GCC1Q96CN9 775 aa24.64■■□□□ 1.54
ACTN4-208ENST00000497637 MEIS3Q99687 375 aa24.64■■□□□ 1.54
ACTN4-208ENST00000497637 BACH2Q9BYV9 841 aa24.64■■□□□ 1.54
ACTN4-208ENST00000497637 HYPKQ9NX55 129 aa24.64■■□□□ 1.54
ACTN4-208ENST00000497637 PRAMEF22A3QJZ6 481 aa24.63■■□□□ 1.53
ACTN4-208ENST00000497637 SAGE1Q9NXZ1 904 aa24.62■■□□□ 1.53
ACTN4-208ENST00000497637 GPRC5DQ9NZD1 345 aa24.62■■□□□ 1.53
ACTN4-208ENST00000497637 NIP7Q9Y221 180 aaKnown RBP eCLIP24.62■■□□□ 1.53
ACTN4-208ENST00000497637 GNAI3P08754 354 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms