RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TTC21AQ8NDW8 1320 aa15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 SRLQ86TD4 932 aa15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 PHACTR2O75167 634 aa15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 ZRANB2O95218 330 aaKnown RBP eCLIP15.24■□□□□ 0.037e-6■■■■■ 37.3
GAPVD1-220ENST00000497580 PUS7Q96PZ0 661 aaKnown RBP15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 ARFGAP3Q9NP61 516 aa15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 TTC31Q49AM3 519 aaPredicted RBP15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 MUM1L1Q5H9M0 696 aa15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 PI4K2BQ8TCG2 481 aa15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 ADAM21Q9UKJ8 722 aa15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 ETF1P62495 437 aaKnown RBP15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 ARMCX5Q6P1M9 558 aa15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 SARM1Q6SZW1 724 aa15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 FSIP1Q8NA03 581 aa15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 LRRC2Q9BYS8 371 aa15.23■□□□□ 0.03
GAPVD1-220ENST00000497580 TBC1D8O95759 1140 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 NOM1Q5C9Z4 860 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 CREB3L3Q68CJ9 461 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 DHX40Q8IX18 779 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 ZSWIM6Q9HCJ5 1215 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 USP32Q8NFA0 1604 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 LMOD1P29536 600 aaPredicted RBP15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 HSP90AB2PQ58FF8 381 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 FOXR1Q6PIV2 292 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 FAM227BQ96M60 508 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 YEATS2Q9ULM3 1422 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 KIF1BO60333 1816 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 TET3O43151 1660 aa15.22■□□□□ 0.03
GAPVD1-220ENST00000497580 FBXO18Q8NFZ0 1043 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 MYO3AQ8NEV4 1616 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 ZFYVE9O95405 1425 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 CC2D1AQ6P1N0 951 aaPredicted RBP15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 GOLGA5Q8TBA6 731 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 GOLPH3LQ9H4A5 285 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 JRKLQ9Y4A0 524 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 TAF6LQ9Y6J9 622 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 MROH2AA6NES4 1674 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 GNG11P61952 73 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 HSP90AA4PQ58FG1 418 aa15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 NAT10Q9H0A0 1025 aaKnown RBP15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
GAPVD1-220ENST00000497580 CAVIN2O95810 425 aa15.2■□□□□ 0.02
GAPVD1-220ENST00000497580 RBM43Q6ZSC3 357 aaKnown RBP15.2■□□□□ 0.02
GAPVD1-220ENST00000497580 ADGRB1O14514 1584 aa15.2■□□□□ 0.02
GAPVD1-220ENST00000497580 A0A1B0GUL7 405 aa15.2■□□□□ 0.02
GAPVD1-220ENST00000497580 TADA3O75528 432 aa15.2■□□□□ 0.02
GAPVD1-220ENST00000497580 NBPF11Q86T75 865 aa15.2■□□□□ 0.02
GAPVD1-220ENST00000497580 CCDC150Q8NCX0 1101 aa15.2■□□□□ 0.02
GAPVD1-220ENST00000497580 CCDC93Q567U6 631 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 PDILTQ8N807 584 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 CFAP45Q9UL16 551 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 KIF13AQ9H1H9 1805 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 H3BQF6 201 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 DEF6Q9H4E7 631 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 PSMA5P28066 241 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 ACTN2P35609 894 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 TTC21BQ7Z4L5 1316 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 HDAC5Q9UQL6 1122 aa15.19■□□□□ 0.02
GAPVD1-220ENST00000497580 VWDEQ8N2E2 1590 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 YTHDC2Q9H6S0 1430 aaKnown RBP15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 A0A1B0GVL5 298 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 SF3A1Q15459 793 aaKnown RBP15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 DPCR1Q3MIW9 517 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 PACS2Q86VP3 889 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 REXO1L1PQ8IX06 675 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 USP44Q9H0E7 712 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 INO80Q9ULG1 1556 aaPredicted RBP15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 PARD6BQ9BYG5 372 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 PDE11AQ9HCR9 933 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 NRXN1Q9ULB1 1477 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 PPP2R3AQ06190 1150 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 WWC2Q6AWC2 1192 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 TTLL5Q6EMB2 1281 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 EP400NLQ6ZTU2 488 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 SLC26A8Q96RN1 970 aa15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 CCDC9Q9Y3X0 531 aaKnown RBP15.18■□□□□ 0.02
GAPVD1-220ENST00000497580 GLRX3O76003 335 aaKnown RBP15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 LRRFIP1Q32MZ4 808 aaKnown RBP15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 CCDC158Q5M9N0 1113 aa15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 EFCAB8A8MWE9 144 aa15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 SLC27A2O14975 620 aa15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 SERPINC1P01008 464 aa15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 CTR9Q6PD62 1173 aa15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 CLASRPQ8N2M8 674 aaKnown RBP15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 NUDT16Q96DE0 195 aaKnown RBP15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 GLI2P10070 1586 aa15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 PRR29P0C7W0 189 aa15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 PUF60Q9UHX1 559 aaKnown RBP15.17■□□□□ 0.02
GAPVD1-220ENST00000497580 ABCC3O15438 1527 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 CTAGE5O15320 804 aa15.16■□□□□ 0.02
GAPVD1-220ENST00000497580 EIF4A2Q14240 407 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms