RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SIN3BO75182 1162 aa7.19□□□□□ -1.26
SMC4-225ENST00000497203 ZAP70P43403 619 aa7.19□□□□□ -1.26
SMC4-225ENST00000497203 KCNA1Q09470 495 aa7.19□□□□□ -1.26
SMC4-225ENST00000497203 CCINQ13939 588 aa7.19□□□□□ -1.26
SMC4-225ENST00000497203 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
SMC4-225ENST00000497203 MDFIQ99750 246 aa7.19□□□□□ -1.26
SMC4-225ENST00000497203 NFKB1P19838 968 aa7.18□□□□□ -1.26
SMC4-225ENST00000497203 SNRPNP63162 240 aaKnown RBP7.18□□□□□ -1.26
SMC4-225ENST00000497203 NEUROD1Q13562 356 aa7.18□□□□□ -1.26
SMC4-225ENST00000497203 KRT25Q7Z3Z0 450 aa7.18□□□□□ -1.26
SMC4-225ENST00000497203 BTBD6Q96KE9 485 aa7.18□□□□□ -1.26
SMC4-225ENST00000497203 KCNMB2Q9Y691 235 aa7.18□□□□□ -1.26
SMC4-225ENST00000497203 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
SMC4-225ENST00000497203 ELOA3DA6NLF2 546 aaPredicted RBP7.17□□□□□ -1.26
SMC4-225ENST00000497203 ABL1P00519 1130 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 MPSTP25325 297 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 TARSP26639 723 aaKnown RBP7.17□□□□□ -1.26
SMC4-225ENST00000497203 ZNF211Q13398 564 aaPredicted RBP7.17□□□□□ -1.26
SMC4-225ENST00000497203 TRIP4Q15650 581 aaPredicted RBP7.17□□□□□ -1.26
SMC4-225ENST00000497203 ELOA3BQ3SY89 546 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 ATCAYQ86WG3 371 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 ABTB2Q8N961 1025 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 ELOA3Q8NG57 546 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 TNFRSF25Q93038 417 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 PNMA5Q96PV4 448 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 ANO2Q9NQ90 1003 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 ZFATQ9P243 1243 aa7.17□□□□□ -1.26
SMC4-225ENST00000497203 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.17□□□□□ -1.26
SMC4-225ENST00000497203 ADARB2-AS1A8MUL3 147 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 XYLBO75191 536 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 SASH3O75995 380 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 HOXB4P17483 251 aaPredicted RBP7.16□□□□□ -1.26
SMC4-225ENST00000497203 AMPD1P23109 780 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 COL8A1P27658 744 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 SERPINB4P48594 390 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 GPR152Q8TDT2 470 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 C11orf16Q9NQ32 467 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 MTMR7Q9Y216 660 aa7.16□□□□□ -1.26
SMC4-225ENST00000497203 EGFRP00533 1210 aa7.15□□□□□ -1.26
SMC4-225ENST00000497203 FURINP09958 794 aa7.15□□□□□ -1.26
SMC4-225ENST00000497203 ARID4AP29374 1257 aaPredicted RBP7.15□□□□□ -1.26
SMC4-225ENST00000497203 ADH7P40394 386 aa7.15□□□□□ -1.26
SMC4-225ENST00000497203 EIF1AXP47813 144 aaKnown RBP7.15□□□□□ -1.26
SMC4-225ENST00000497203 CHSY3Q70JA7 882 aa7.15□□□□□ -1.26
SMC4-225ENST00000497203 PIK3R5Q8WYR1 880 aa7.15□□□□□ -1.26
SMC4-225ENST00000497203 IGFLR1Q9H665 355 aa7.15□□□□□ -1.26
SMC4-225ENST00000497203 EFCC1Q9HA90 598 aa7.15□□□□□ -1.26
SMC4-225ENST00000497203 MKL2Q9ULH7 1088 aa7.15□□□□□ -1.26
SMC4-225ENST00000497203 CCDC9Q9Y3X0 531 aaKnown RBP7.15□□□□□ -1.26
SMC4-225ENST00000497203 RARAP10276 462 aa7.14□□□□□ -1.27
SMC4-225ENST00000497203 NPR3P17342 541 aa7.14□□□□□ -1.27
SMC4-225ENST00000497203 TBC1D8BQ0IIM8 1120 aa7.14□□□□□ -1.27
SMC4-225ENST00000497203 NOM1Q5C9Z4 860 aaKnown RBP7.14□□□□□ -1.27
SMC4-225ENST00000497203 TXNDC2Q86VQ3 553 aa7.14□□□□□ -1.27
SMC4-225ENST00000497203 UBE2OQ9C0C9 1292 aaKnown RBP7.14□□□□□ -1.27
SMC4-225ENST00000497203 RRAGCQ9HB90 399 aa7.14□□□□□ -1.27
SMC4-225ENST00000497203 FAM13BQ9NYF5 915 aa7.14□□□□□ -1.27
SMC4-225ENST00000497203 MAP3K6O95382 1288 aa7.13□□□□□ -1.27
SMC4-225ENST00000497203 FKBP4Q02790 459 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMC4-225ENST00000497203 SF3B2Q13435 895 aaKnown RBP7.13□□□□□ -1.27
SMC4-225ENST00000497203 EDEM1Q92611 657 aa7.13□□□□□ -1.27
SMC4-225ENST00000497203 DNAJB12Q9NXW2 375 aaKnown RBP7.13□□□□□ -1.27
SMC4-225ENST00000497203 STARD13Q9Y3M8 1113 aa7.13□□□□□ -1.27
SMC4-225ENST00000497203 UBAP1LF5GYI3 381 aa7.12□□□□□ -1.27
SMC4-225ENST00000497203 ALAS2P22557 587 aa7.12□□□□□ -1.27
SMC4-225ENST00000497203 DGKGP49619 791 aa7.12□□□□□ -1.27
SMC4-225ENST00000497203 DNM1Q05193 864 aaKnown RBP7.12□□□□□ -1.27
SMC4-225ENST00000497203 LINC00114Q6XXX2 140 aa7.12□□□□□ -1.27
SMC4-225ENST00000497203 DHX32Q7L7V1 743 aaKnown RBP7.12□□□□□ -1.27
SMC4-225ENST00000497203 NUDT16Q96DE0 195 aaKnown RBP7.12□□□□□ -1.27
SMC4-225ENST00000497203 EGFL7Q9UHF1 273 aa7.12□□□□□ -1.27
SMC4-225ENST00000497203 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
SMC4-225ENST00000497203 ZBTB42B2RXF5 422 aa7.11□□□□□ -1.27
SMC4-225ENST00000497203 H3BRB1 525 aa7.11□□□□□ -1.27
SMC4-225ENST00000497203 ICMTO60725 284 aa7.11□□□□□ -1.27
SMC4-225ENST00000497203 MMP20O60882 483 aa7.11□□□□□ -1.27
SMC4-225ENST00000497203 FAM13AO94988 1023 aa7.11□□□□□ -1.27
SMC4-225ENST00000497203 TUT1Q9H6E5 874 aaKnown RBP7.11□□□□□ -1.27
SMC4-225ENST00000497203 NAGPAQ9UK23 515 aa7.11□□□□□ -1.27
SMC4-225ENST00000497203 ALBP02768 609 aa7.1□□□□□ -1.27
SMC4-225ENST00000497203 PDGFAP04085 211 aa7.1□□□□□ -1.27
SMC4-225ENST00000497203 MLLT1Q03111 559 aaPredicted RBP7.1□□□□□ -1.27
SMC4-225ENST00000497203 ECM1Q16610 540 aa7.1□□□□□ -1.27
SMC4-225ENST00000497203 ALKBH2Q6NS38 261 aa7.1□□□□□ -1.27
SMC4-225ENST00000497203 NLRP13Q86W25 1043 aa7.1□□□□□ -1.27
SMC4-225ENST00000497203 TLR7Q9NYK1 1049 aaKnown RBP7.1□□□□□ -1.27
SMC4-225ENST00000497203 A6NHS1 94 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 FZD6O60353 706 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 ITGB7P26010 798 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 MZF1P28698 734 aaPredicted RBP7.09□□□□□ -1.27
SMC4-225ENST00000497203 AAMPQ13685 434 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 C20orf204Q6ZNR8 217 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 C8orf86Q6ZUL3 223 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 TRPM4Q8TD43 1214 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 GZF1Q9H116 711 aaPredicted RBP7.09□□□□□ -1.27
SMC4-225ENST00000497203 GGNBP2Q9H3C7 697 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 CCDC87Q9NVE4 849 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 POLIQ9UNA4 740 aa7.09□□□□□ -1.27
SMC4-225ENST00000497203 FNDC3AQ9Y2H6 1198 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms