RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
VPS72-206ENST00000496809 USP50Q70EL3 339 aaPredicted RBP16■□□□□ 0.15
VPS72-206ENST00000496809 FAM89AQ96GI7 184 aa16■□□□□ 0.15
VPS72-206ENST00000496809 KIAA2012Q0VF49 1180 aa15.99■□□□□ 0.15
VPS72-206ENST00000496809 TNIP1Q15025 636 aa15.99■□□□□ 0.15
VPS72-206ENST00000496809 MKRN1Q9UHC7 482 aaKnown RBP15.99■□□□□ 0.15
VPS72-206ENST00000496809 ELL2O00472 640 aaPredicted RBP15.98■□□□□ 0.15
VPS72-206ENST00000496809 IRS4O14654 1257 aaPredicted RBP15.98■□□□□ 0.15
VPS72-206ENST00000496809 SCNN1DP51172 638 aa15.98■□□□□ 0.15
VPS72-206ENST00000496809 MAP1SQ66K74 1059 aaPredicted RBP15.98■□□□□ 0.15
VPS72-206ENST00000496809 CNTNAP1P78357 1384 aa15.98■□□□□ 0.15
VPS72-206ENST00000496809 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 HSPA1AP0DMV8 641 aaKnown RBP15.97■□□□□ 0.15
VPS72-206ENST00000496809 HSPA1BP0DMV9 641 aaKnown RBP15.97■□□□□ 0.15
VPS72-206ENST00000496809 EPS15P42566 896 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 CXCL9Q07325 125 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 CIAPIN1Q6FI81 312 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
VPS72-206ENST00000496809 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 ADARB2Q9NS39 739 aaKnown RBP15.97■□□□□ 0.15
VPS72-206ENST00000496809 GPRC5DQ9NZD1 345 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 COL4A5P29400 1685 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 ADAMTSL1Q8N6G6 1762 aa15.97■□□□□ 0.15
VPS72-206ENST00000496809 LAMB2P55268 1798 aa15.96■□□□□ 0.15
VPS72-206ENST00000496809 WASHC4Q2M389 1173 aa15.96■□□□□ 0.15
VPS72-206ENST00000496809 EYA3Q99504 573 aa15.96■□□□□ 0.15
VPS72-206ENST00000496809 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
VPS72-206ENST00000496809 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
VPS72-206ENST00000496809 PHAXQ9H814 394 aaKnown RBP15.96■□□□□ 0.15
VPS72-206ENST00000496809 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
VPS72-206ENST00000496809 RPS8P62241 208 aaKnown RBP15.95■□□□□ 0.14
VPS72-206ENST00000496809 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
VPS72-206ENST00000496809 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
VPS72-206ENST00000496809 C8orf58Q8NAV2 365 aa15.95■□□□□ 0.14
VPS72-206ENST00000496809 PCCAP05165 728 aaPredicted RBP15.94■□□□□ 0.14
VPS72-206ENST00000496809 DEFB115Q30KQ5 88 aa15.94■□□□□ 0.14
VPS72-206ENST00000496809 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
VPS72-206ENST00000496809 COL13A1Q5TAT6 717 aaPredicted RBP15.94■□□□□ 0.14
VPS72-206ENST00000496809 SLC51AQ86UW1 340 aa15.94■□□□□ 0.14
VPS72-206ENST00000496809 CELF1Q92879 486 aaKnown RBP15.94■□□□□ 0.14
VPS72-206ENST00000496809 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
VPS72-206ENST00000496809 MYD88Q99836 296 aa15.94■□□□□ 0.14
VPS72-206ENST00000496809 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
VPS72-206ENST00000496809 RASSF10A6NK89 507 aa15.93■□□□□ 0.14
VPS72-206ENST00000496809 C6orf229H3BNL8 230 aa15.93■□□□□ 0.14
VPS72-206ENST00000496809 ANP32CO43423 234 aa15.93■□□□□ 0.14
VPS72-206ENST00000496809 GMPSP49915 693 aaPredicted RBP15.93■□□□□ 0.14
VPS72-206ENST00000496809 NEXNQ0ZGT2 675 aa15.93■□□□□ 0.14
VPS72-206ENST00000496809 AIDAQ96BJ3 306 aa15.93■□□□□ 0.14
VPS72-206ENST00000496809 METTL22Q9BUU2 404 aaPredicted RBP15.93■□□□□ 0.14
VPS72-206ENST00000496809 ABT1Q9ULW3 272 aaKnown RBP15.93■□□□□ 0.14
VPS72-206ENST00000496809 IL16Q14005 1332 aa15.93■□□□□ 0.14
VPS72-206ENST00000496809 DDX60Q8IY21 1712 aaKnown RBP15.92■□□□□ 0.14
VPS72-206ENST00000496809 H7C1D1 291 aa15.92■□□□□ 0.14
VPS72-206ENST00000496809 PDE8AO60658 829 aa15.92■□□□□ 0.14
VPS72-206ENST00000496809 RAD17O75943 681 aa15.92■□□□□ 0.14
VPS72-206ENST00000496809 VEGFBP49765 207 aa15.92■□□□□ 0.14
VPS72-206ENST00000496809 WWC1Q8IX03 1113 aa15.92■□□□□ 0.14
VPS72-206ENST00000496809 TNS4Q8IZW8 715 aa15.92■□□□□ 0.14
VPS72-206ENST00000496809 ZC3H15Q8WU90 426 aaKnown RBP15.92■□□□□ 0.14
VPS72-206ENST00000496809 KSR2Q6VAB6 950 aa15.91■□□□□ 0.14
VPS72-206ENST00000496809 MRS2Q9HD23 443 aa15.91■□□□□ 0.14
VPS72-206ENST00000496809 LRRC37AA6NMS7 1700 aa15.91■□□□□ 0.14
VPS72-206ENST00000496809 G3V3G9 751 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 GPSM2P81274 684 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 TWISTNBQ3B726 338 aaPredicted RBP15.9■□□□□ 0.14
VPS72-206ENST00000496809 DCAF8Q5TAQ9 597 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 DPF2Q92785 391 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 ZC3H12CQ9C0D7 883 aaKnown RBP15.9■□□□□ 0.14
VPS72-206ENST00000496809 PODXL2Q9NZ53 605 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 ANKIB1Q9P2G1 1089 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 PGAP2Q9UHJ9 254 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 CNOT7Q9UIV1 285 aaKnown RBP15.9■□□□□ 0.14
VPS72-206ENST00000496809 MAP3K2Q9Y2U5 619 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 LTBP1Q14766 1721 aa15.9■□□□□ 0.14
VPS72-206ENST00000496809 PI4KAP2A4QPH2 592 aa15.89■□□□□ 0.13
VPS72-206ENST00000496809 RIMBP2O15034 1052 aa15.89■□□□□ 0.13
VPS72-206ENST00000496809 RPS12P25398 132 aaKnown RBP15.89■□□□□ 0.13
VPS72-206ENST00000496809 ECE1P42892 770 aa15.89■□□□□ 0.13
VPS72-206ENST00000496809 MAP2K1Q02750 393 aaPredicted RBP15.89■□□□□ 0.13
VPS72-206ENST00000496809 PI4KAP1Q8N8J0 262 aa15.89■□□□□ 0.13
VPS72-206ENST00000496809 TBC1D16Q8TBP0 767 aa15.89■□□□□ 0.13
VPS72-206ENST00000496809 TSR2Q969E8 191 aaKnown RBP15.89■□□□□ 0.13
VPS72-206ENST00000496809 POLLQ9UGP5 575 aa15.89■□□□□ 0.13
VPS72-206ENST00000496809 ZNF316A6NFI3 1004 aaPredicted RBP15.88■□□□□ 0.13
VPS72-206ENST00000496809 YDJCA8MPS7 323 aa15.88■□□□□ 0.13
VPS72-206ENST00000496809 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
VPS72-206ENST00000496809 CCDC184Q52MB2 194 aa15.88■□□□□ 0.13
VPS72-206ENST00000496809 ANKRD18AQ8IVF6 992 aa15.88■□□□□ 0.13
VPS72-206ENST00000496809 DBNDD1Q9H9R9 158 aa15.88■□□□□ 0.13
VPS72-206ENST00000496809 GGA1Q9UJY5 639 aa15.88■□□□□ 0.13
VPS72-206ENST00000496809 WDR33Q9C0J8 1336 aaKnown RBP15.88■□□□□ 0.13
VPS72-206ENST00000496809 DUOX1Q9NRD9 1551 aa15.87■□□□□ 0.13
VPS72-206ENST00000496809 ECE2O60344 883 aa15.87■□□□□ 0.13
VPS72-206ENST00000496809 CTCFP49711 727 aaPredicted RBP15.87■□□□□ 0.13
VPS72-206ENST00000496809 CDC37L1Q7L3B6 337 aa15.87■□□□□ 0.13
VPS72-206ENST00000496809 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
VPS72-206ENST00000496809 MICALL2Q8IY33 904 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms