RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SP8Q8IXZ3 490 aa18.44■□□□□ 0.54
VTI1A-209ENST00000496445 MYD88Q99836 296 aa18.44■□□□□ 0.54
VTI1A-209ENST00000496445 HACL1Q9UJ83 578 aa18.44■□□□□ 0.54
VTI1A-209ENST00000496445 MYH3P11055 1940 aa18.43■□□□□ 0.54
VTI1A-209ENST00000496445 PPIP5K2O43314 1243 aa18.43■□□□□ 0.54
VTI1A-209ENST00000496445 SF3B3Q15393 1217 aaKnown RBP18.43■□□□□ 0.54
VTI1A-209ENST00000496445 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
VTI1A-209ENST00000496445 LDHDQ86WU2 507 aa18.43■□□□□ 0.54
VTI1A-209ENST00000496445 IL16Q14005 1332 aa18.43■□□□□ 0.54
VTI1A-209ENST00000496445 EPHX2P34913 555 aa18.42■□□□□ 0.54
VTI1A-209ENST00000496445 EIF6P56537 245 aaKnown RBP18.42■□□□□ 0.54
VTI1A-209ENST00000496445 DPP8Q6V1X1 898 aaPredicted RBP18.42■□□□□ 0.54
VTI1A-209ENST00000496445 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
VTI1A-209ENST00000496445 CACNA1FO60840 1977 aa18.42■□□□□ 0.54
VTI1A-209ENST00000496445 PASKQ96RG2 1323 aa18.42■□□□□ 0.54
VTI1A-209ENST00000496445 IRS4O14654 1257 aaPredicted RBP18.41■□□□□ 0.54
VTI1A-209ENST00000496445 SCNN1DP51172 638 aa18.41■□□□□ 0.54
VTI1A-209ENST00000496445 NIM1KQ8IY84 436 aa18.41■□□□□ 0.54
VTI1A-209ENST00000496445 JMYQ8N9B5 988 aa18.41■□□□□ 0.54
VTI1A-209ENST00000496445 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
VTI1A-209ENST00000496445 METTL22Q9BUU2 404 aaPredicted RBP18.41■□□□□ 0.54
VTI1A-209ENST00000496445 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
VTI1A-209ENST00000496445 GJA3Q9Y6H8 435 aa18.41■□□□□ 0.54
VTI1A-209ENST00000496445 SPEF2Q9C093 1822 aa18.41■□□□□ 0.54
VTI1A-209ENST00000496445 FANCIQ9NVI1 1328 aa18.41■□□□□ 0.54
VTI1A-209ENST00000496445 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
VTI1A-209ENST00000496445 EAPPQ56P03 285 aaPredicted RBP18.4■□□□□ 0.54
VTI1A-209ENST00000496445 TMC4Q7Z404 712 aa18.4■□□□□ 0.54
VTI1A-209ENST00000496445 MPNDQ8N594 471 aa18.4■□□□□ 0.54
VTI1A-209ENST00000496445 SUPT20HQ8NEM7 779 aa18.4■□□□□ 0.54
VTI1A-209ENST00000496445 VPS33BQ9H267 617 aa18.4■□□□□ 0.54
VTI1A-209ENST00000496445 PCCAP05165 728 aaPredicted RBP18.39■□□□□ 0.53
VTI1A-209ENST00000496445 KIAA2012Q0VF49 1180 aa18.39■□□□□ 0.53
VTI1A-209ENST00000496445 CCDC191Q8NCU4 936 aa18.39■□□□□ 0.53
VTI1A-209ENST00000496445 MAP3K2Q9Y2U5 619 aa18.39■□□□□ 0.53
VTI1A-209ENST00000496445 DDX58O95786 925 aaKnown RBP18.38■□□□□ 0.53
VTI1A-209ENST00000496445 G2E3Q7L622 706 aa18.38■□□□□ 0.53
VTI1A-209ENST00000496445 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
VTI1A-209ENST00000496445 CHMP4AQ9BY43 222 aa18.38■□□□□ 0.53
VTI1A-209ENST00000496445 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
VTI1A-209ENST00000496445 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
VTI1A-209ENST00000496445 PI4KAP2A4QPH2 592 aa18.37■□□□□ 0.53
VTI1A-209ENST00000496445 ITGBL1O95965 494 aaPredicted RBP18.37■□□□□ 0.53
VTI1A-209ENST00000496445 IGKV5-2P06315 115 aa18.37■□□□□ 0.53
VTI1A-209ENST00000496445 KSR2Q6VAB6 950 aa18.37■□□□□ 0.53
VTI1A-209ENST00000496445 PNMA8AQ86V59 439 aaPredicted RBP18.37■□□□□ 0.53
VTI1A-209ENST00000496445 PI4KAP1Q8N8J0 262 aa18.37■□□□□ 0.53
VTI1A-209ENST00000496445 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
VTI1A-209ENST00000496445 CREBZFQ9NS37 354 aa18.37■□□□□ 0.53
VTI1A-209ENST00000496445 ZNRF3Q9ULT6 936 aa18.37■□□□□ 0.53
VTI1A-209ENST00000496445 EPS15P42566 896 aa18.36■□□□□ 0.53
VTI1A-209ENST00000496445 CXCL9Q07325 125 aa18.36■□□□□ 0.53
VTI1A-209ENST00000496445 WDR63Q8IWG1 891 aa18.36■□□□□ 0.53
VTI1A-209ENST00000496445 SEC31BQ9NQW1 1179 aa18.36■□□□□ 0.53
VTI1A-209ENST00000496445 CDHR2Q9BYE9 1310 aa18.35■□□□□ 0.53
VTI1A-209ENST00000496445 YDJCA8MPS7 323 aa18.35■□□□□ 0.53
VTI1A-209ENST00000496445 LMOD1P29536 600 aaPredicted RBP18.35■□□□□ 0.53
VTI1A-209ENST00000496445 GPSM2P81274 684 aa18.35■□□□□ 0.53
VTI1A-209ENST00000496445 MAP1SQ66K74 1059 aaPredicted RBP18.35■□□□□ 0.53
VTI1A-209ENST00000496445 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
VTI1A-209ENST00000496445 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
VTI1A-209ENST00000496445 SCN9AQ15858 1988 aa18.35■□□□□ 0.53
VTI1A-209ENST00000496445 PDE8AO60658 829 aa18.34■□□□□ 0.53
VTI1A-209ENST00000496445 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
VTI1A-209ENST00000496445 CWF19L2Q2TBE0 894 aaKnown RBP18.34■□□□□ 0.53
VTI1A-209ENST00000496445 POLLQ9UGP5 575 aa18.34■□□□□ 0.53
VTI1A-209ENST00000496445 TRPM7Q96QT4 1865 aa18.34■□□□□ 0.53
VTI1A-209ENST00000496445 PSME4Q14997 1843 aa18.33■□□□□ 0.53
VTI1A-209ENST00000496445 RPS8P62241 208 aaKnown RBP18.33■□□□□ 0.52
VTI1A-209ENST00000496445 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
VTI1A-209ENST00000496445 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.52
VTI1A-209ENST00000496445 GPRC5DQ9NZD1 345 aa18.33■□□□□ 0.52
VTI1A-209ENST00000496445 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.52
VTI1A-209ENST00000496445 NEURL1BA8MQ27 555 aa18.32■□□□□ 0.52
VTI1A-209ENST00000496445 VAMP4O75379 141 aa18.32■□□□□ 0.52
VTI1A-209ENST00000496445 RAD17O75943 681 aa18.32■□□□□ 0.52
VTI1A-209ENST00000496445 HSP90B1P14625 803 aaKnown RBP18.32■□□□□ 0.52
VTI1A-209ENST00000496445 GMPSP49915 693 aaPredicted RBP18.32■□□□□ 0.52
VTI1A-209ENST00000496445 EXOSC9Q06265 439 aaKnown RBP18.32■□□□□ 0.52
VTI1A-209ENST00000496445 FLIIQ13045 1269 aa18.32■□□□□ 0.52
VTI1A-209ENST00000496445 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
VTI1A-209ENST00000496445 CIAPIN1Q6FI81 312 aa18.32■□□□□ 0.52
VTI1A-209ENST00000496445 CNTROBQ8N137 903 aa18.32■□□□□ 0.52
VTI1A-209ENST00000496445 GPR101Q96P66 508 aaPredicted RBP18.32■□□□□ 0.52
VTI1A-209ENST00000496445 CNTNAP1P78357 1384 aa18.31■□□□□ 0.52
VTI1A-209ENST00000496445 WASHC4Q2M389 1173 aa18.31■□□□□ 0.52
VTI1A-209ENST00000496445 USP50Q70EL3 339 aaPredicted RBP18.31■□□□□ 0.52
VTI1A-209ENST00000496445 TBC1D16Q8TBP0 767 aa18.31■□□□□ 0.52
VTI1A-209ENST00000496445 MKRN1Q9UHC7 482 aaKnown RBP18.31■□□□□ 0.52
VTI1A-209ENST00000496445 ZNF646O15015 1829 aaPredicted RBP18.3■□□□□ 0.52
VTI1A-209ENST00000496445 CTSWP56202 376 aa18.3■□□□□ 0.52
VTI1A-209ENST00000496445 NEXNQ0ZGT2 675 aa18.3■□□□□ 0.52
VTI1A-209ENST00000496445 DBNDD1Q9H9R9 158 aa18.3■□□□□ 0.52
VTI1A-209ENST00000496445 ADARB2Q9NS39 739 aaKnown RBP18.3■□□□□ 0.52
VTI1A-209ENST00000496445 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
VTI1A-209ENST00000496445 TMEM88BA6NKF7 163 aa18.29■□□□□ 0.52
VTI1A-209ENST00000496445 C6orf229H3BNL8 230 aa18.29■□□□□ 0.52
VTI1A-209ENST00000496445 RIMBP2O15034 1052 aa18.29■□□□□ 0.52
VTI1A-209ENST00000496445 A0A1B0GUL6 1792 aa18.29■□□□□ 0.52
VTI1A-209ENST00000496445 RTL9Q8NET4 1388 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms