RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 GRAPLQ8TC17 118 aaPredicted RBP18.65■□□□□ 0.58
CXCL12-208ENST00000496375 VPS33BQ9H267 617 aa18.65■□□□□ 0.58
CXCL12-208ENST00000496375 HYPKQ9NX55 129 aa18.65■□□□□ 0.58
CXCL12-208ENST00000496375 DDX60Q8IY21 1712 aaKnown RBP18.64■□□□□ 0.57
CXCL12-208ENST00000496375 ATP5J2-PTCD1G3V325 749 aa18.64■□□□□ 0.57
CXCL12-208ENST00000496375 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
CXCL12-208ENST00000496375 EPS15P42566 896 aa18.64■□□□□ 0.57
CXCL12-208ENST00000496375 DIEXFQ68CQ4 756 aaKnown RBP18.64■□□□□ 0.57
CXCL12-208ENST00000496375 MPNDQ8N594 471 aa18.64■□□□□ 0.57
CXCL12-208ENST00000496375 ISCA1Q9BUE6 129 aa18.64■□□□□ 0.57
CXCL12-208ENST00000496375 RTFDC1Q9BY42 306 aaPredicted RBP18.64■□□□□ 0.57
CXCL12-208ENST00000496375 NCBP3Q53F19 620 aaKnown RBP18.63■□□□□ 0.57
CXCL12-208ENST00000496375 FAM89AQ96GI7 184 aa18.63■□□□□ 0.57
CXCL12-208ENST00000496375 IFT57Q9NWB7 429 aa18.63■□□□□ 0.57
CXCL12-208ENST00000496375 ZNRF3Q9ULT6 936 aa18.63■□□□□ 0.57
CXCL12-208ENST00000496375 CALD1Q05682 793 aaKnown RBP18.62■□□□□ 0.57
CXCL12-208ENST00000496375 GNAI1P63096 354 aa18.61■□□□□ 0.57
CXCL12-208ENST00000496375 CXCL9Q07325 125 aa18.61■□□□□ 0.57
CXCL12-208ENST00000496375 RTL5Q5HYW3 569 aaPredicted RBP18.61■□□□□ 0.57
CXCL12-208ENST00000496375 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-208ENST00000496375 KIAA2012Q0VF49 1180 aa18.6■□□□□ 0.57
CXCL12-208ENST00000496375 USP50Q70EL3 339 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-208ENST00000496375 TMC4Q7Z404 712 aa18.6■□□□□ 0.57
CXCL12-208ENST00000496375 RIC3Q7Z5B4 369 aa18.6■□□□□ 0.57
CXCL12-208ENST00000496375 VEGFBP49765 207 aa18.59■□□□□ 0.57
CXCL12-208ENST00000496375 GOLGA2Q08379 1002 aa18.59■□□□□ 0.57
CXCL12-208ENST00000496375 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
CXCL12-208ENST00000496375 SF3B3Q15393 1217 aaKnown RBP18.59■□□□□ 0.57
CXCL12-208ENST00000496375 TNS4Q8IZW8 715 aa18.59■□□□□ 0.57
CXCL12-208ENST00000496375 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
CXCL12-208ENST00000496375 GPRC5DQ9NZD1 345 aa18.59■□□□□ 0.57
CXCL12-208ENST00000496375 LRRC37AA6NMS7 1700 aa18.59■□□□□ 0.57
CXCL12-208ENST00000496375 DUOX1Q9NRD9 1551 aa18.59■□□□□ 0.57
CXCL12-208ENST00000496375 CELF1Q92879 486 aaKnown RBP18.58■□□□□ 0.56
CXCL12-208ENST00000496375 ADARB2Q9NS39 739 aaKnown RBP18.58■□□□□ 0.56
CXCL12-208ENST00000496375 IRS4O14654 1257 aaPredicted RBP18.57■□□□□ 0.56
CXCL12-208ENST00000496375 RAD17O75943 681 aa18.57■□□□□ 0.56
CXCL12-208ENST00000496375 GMPSP49915 693 aaPredicted RBP18.57■□□□□ 0.56
CXCL12-208ENST00000496375 CCDC27Q2M243 656 aa18.57■□□□□ 0.56
CXCL12-208ENST00000496375 DEFB115Q30KQ5 88 aa18.57■□□□□ 0.56
CXCL12-208ENST00000496375 CIAPIN1Q6FI81 312 aa18.57■□□□□ 0.56
CXCL12-208ENST00000496375 C8orf58Q8NAV2 365 aa18.57■□□□□ 0.56
CXCL12-208ENST00000496375 ABT1Q9ULW3 272 aaKnown RBP18.57■□□□□ 0.56
CXCL12-208ENST00000496375 RASSF10A6NK89 507 aa18.56■□□□□ 0.56
CXCL12-208ENST00000496375 FMR1Q06787 632 aaKnown RBP eCLIP18.56■□□□□ 0.56
CXCL12-208ENST00000496375 TNIP1Q15025 636 aa18.56■□□□□ 0.56
CXCL12-208ENST00000496375 COL4A1P02462 1669 aa18.56■□□□□ 0.56
CXCL12-208ENST00000496375 YDJCA8MPS7 323 aa18.55■□□□□ 0.56
CXCL12-208ENST00000496375 ZBTB38Q8NAP3 1195 aaPredicted RBP18.55■□□□□ 0.56
CXCL12-208ENST00000496375 MYD88Q99836 296 aa18.55■□□□□ 0.56
CXCL12-208ENST00000496375 BCL2L13Q9BXK5 485 aa18.55■□□□□ 0.56
CXCL12-208ENST00000496375 NSFL1CQ9UNZ2 370 aaKnown RBP18.55■□□□□ 0.56
CXCL12-208ENST00000496375 TRPM7Q96QT4 1865 aa18.54■□□□□ 0.56
CXCL12-208ENST00000496375 TRAF5O00463 557 aa18.54■□□□□ 0.56
CXCL12-208ENST00000496375 FOXN1O15353 648 aa18.54■□□□□ 0.56
CXCL12-208ENST00000496375 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
CXCL12-208ENST00000496375 GPSM2P81274 684 aa18.53■□□□□ 0.56
CXCL12-208ENST00000496375 WASHC4Q2M389 1173 aa18.53■□□□□ 0.56
CXCL12-208ENST00000496375 CCDC30Q5VVM6 783 aa18.53■□□□□ 0.56
CXCL12-208ENST00000496375 C6orf229H3BNL8 230 aa18.52■□□□□ 0.56
CXCL12-208ENST00000496375 CAPN15O75808 1086 aa18.52■□□□□ 0.56
CXCL12-208ENST00000496375 RPS8P62241 208 aaKnown RBP18.52■□□□□ 0.56
CXCL12-208ENST00000496375 TSPYL6Q8N831 410 aa18.52■□□□□ 0.56
CXCL12-208ENST00000496375 CCDC191Q8NCU4 936 aa18.52■□□□□ 0.56
CXCL12-208ENST00000496375 AIDAQ96BJ3 306 aa18.52■□□□□ 0.56
CXCL12-208ENST00000496375 CHMP4AQ9BY43 222 aa18.52■□□□□ 0.56
CXCL12-208ENST00000496375 POLLQ9UGP5 575 aa18.52■□□□□ 0.56
CXCL12-208ENST00000496375 WDR33Q9C0J8 1336 aaKnown RBP18.51■□□□□ 0.55
CXCL12-208ENST00000496375 RIMBP2O15034 1052 aa18.51■□□□□ 0.55
CXCL12-208ENST00000496375 DDX58O95786 925 aaKnown RBP18.51■□□□□ 0.55
CXCL12-208ENST00000496375 HSP90B1P14625 803 aaKnown RBP18.51■□□□□ 0.55
CXCL12-208ENST00000496375 CST9Q5W186 159 aa18.51■□□□□ 0.55
CXCL12-208ENST00000496375 FAM9BQ8IZU0 186 aa18.51■□□□□ 0.55
CXCL12-208ENST00000496375 MIER1Q8N108 512 aa18.51■□□□□ 0.55
CXCL12-208ENST00000496375 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
CXCL12-208ENST00000496375 METTL22Q9BUU2 404 aaPredicted RBP18.51■□□□□ 0.55
CXCL12-208ENST00000496375 DBNDD1Q9H9R9 158 aa18.51■□□□□ 0.55
CXCL12-208ENST00000496375 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
CXCL12-208ENST00000496375 CWC25Q9NXE8 425 aaPredicted RBP18.51■□□□□ 0.55
CXCL12-208ENST00000496375 CNOT7Q9UIV1 285 aaKnown RBP18.51■□□□□ 0.55
CXCL12-208ENST00000496375 SHTN1A0MZ66 631 aa18.5■□□□□ 0.55
CXCL12-208ENST00000496375 PCCAP05165 728 aaPredicted RBP18.5■□□□□ 0.55
CXCL12-208ENST00000496375 HIRAP54198 1017 aaPredicted RBP18.5■□□□□ 0.55
CXCL12-208ENST00000496375 TRPM4Q8TD43 1214 aa18.5■□□□□ 0.55
CXCL12-208ENST00000496375 JARID2Q92833 1246 aaPredicted RBP18.5■□□□□ 0.55
CXCL12-208ENST00000496375 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
CXCL12-208ENST00000496375 EYA3Q99504 573 aa18.5■□□□□ 0.55
CXCL12-208ENST00000496375 WBP1LQ9NX94 342 aa18.5■□□□□ 0.55
CXCL12-208ENST00000496375 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
CXCL12-208ENST00000496375 PSMD14O00487 310 aa18.49■□□□□ 0.55
CXCL12-208ENST00000496375 PDE8AO60658 829 aa18.49■□□□□ 0.55
CXCL12-208ENST00000496375 CTCFP49711 727 aaPredicted RBP18.49■□□□□ 0.55
CXCL12-208ENST00000496375 CCDC152Q4G0S7 254 aa18.49■□□□□ 0.55
CXCL12-208ENST00000496375 PAXIP1Q6ZW49 1069 aaPredicted RBP18.49■□□□□ 0.55
CXCL12-208ENST00000496375 MICALL2Q8IY33 904 aa18.49■□□□□ 0.55
CXCL12-208ENST00000496375 TBC1D16Q8TBP0 767 aa18.49■□□□□ 0.55
CXCL12-208ENST00000496375 GLIS2Q9BZE0 524 aaPredicted RBP18.49■□□□□ 0.55
CXCL12-208ENST00000496375 PGAP2Q9UHJ9 254 aa18.49■□□□□ 0.55
CXCL12-208ENST00000496375 H7C1D1 291 aa18.48■□□□□ 0.55
CXCL12-208ENST00000496375 ECE2O60344 883 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms