RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.09
APOBEC3A-204ENST00000495988 LMOD1P29536 600 aaPredicted RBP21.89■■□□□ 1.09
APOBEC3A-204ENST00000495988 CHMP4AQ9BY43 222 aa21.89■■□□□ 1.09
APOBEC3A-204ENST00000495988 CREBZFQ9NS37 354 aa21.89■■□□□ 1.09
APOBEC3A-204ENST00000495988 PASKQ96RG2 1323 aa21.88■■□□□ 1.09
APOBEC3A-204ENST00000495988 SF3B3Q15393 1217 aaKnown RBP21.88■■□□□ 1.09
APOBEC3A-204ENST00000495988 IFFO2Q5TF58 517 aa21.88■■□□□ 1.09
APOBEC3A-204ENST00000495988 CCDC30Q5VVM6 783 aa21.88■■□□□ 1.09
APOBEC3A-204ENST00000495988 TMC4Q7Z404 712 aa21.88■■□□□ 1.09
APOBEC3A-204ENST00000495988 MRS2Q9HD23 443 aa21.88■■□□□ 1.09
APOBEC3A-204ENST00000495988 LTBP1Q14766 1721 aa21.87■■□□□ 1.09
APOBEC3A-204ENST00000495988 IRS4O14654 1257 aaPredicted RBP21.87■■□□□ 1.09
APOBEC3A-204ENST00000495988 ANP32CO43423 234 aa21.87■■□□□ 1.09
APOBEC3A-204ENST00000495988 CCDC27Q2M243 656 aa21.87■■□□□ 1.09
APOBEC3A-204ENST00000495988 TSPYL6Q8N831 410 aa21.87■■□□□ 1.09
APOBEC3A-204ENST00000495988 TSR2Q969E8 191 aaKnown RBP21.87■■□□□ 1.09
APOBEC3A-204ENST00000495988 MYD88Q99836 296 aa21.87■■□□□ 1.09
APOBEC3A-204ENST00000495988 ITGBL1O95965 494 aaPredicted RBP21.86■■□□□ 1.09
APOBEC3A-204ENST00000495988 SCNN1DP51172 638 aa21.86■■□□□ 1.09
APOBEC3A-204ENST00000495988 WWC1Q8IX03 1113 aa21.86■■□□□ 1.09
APOBEC3A-204ENST00000495988 CELF1Q92879 486 aaKnown RBP21.86■■□□□ 1.09
APOBEC3A-204ENST00000495988 ZNRF3Q9ULT6 936 aa21.86■■□□□ 1.09
APOBEC3A-204ENST00000495988 LRRC37AA6NMS7 1700 aa21.86■■□□□ 1.09
APOBEC3A-204ENST00000495988 DDX58O95786 925 aaKnown RBP21.85■■□□□ 1.09
APOBEC3A-204ENST00000495988 KIAA2012Q0VF49 1180 aa21.85■■□□□ 1.09
APOBEC3A-204ENST00000495988 MAP1SQ66K74 1059 aaPredicted RBP21.85■■□□□ 1.09
APOBEC3A-204ENST00000495988 ZBTB38Q8NAP3 1195 aaPredicted RBP21.85■■□□□ 1.09
APOBEC3A-204ENST00000495988 EPS15P42566 896 aa21.84■■□□□ 1.09
APOBEC3A-204ENST00000495988 CNTROBQ8N137 903 aa21.84■■□□□ 1.09
APOBEC3A-204ENST00000495988 MKRN1Q9UHC7 482 aaKnown RBP21.84■■□□□ 1.09
APOBEC3A-204ENST00000495988 CXCL9Q07325 125 aa21.83■■□□□ 1.09
APOBEC3A-204ENST00000495988 CCDC191Q8NCU4 936 aa21.83■■□□□ 1.09
APOBEC3A-204ENST00000495988 METTL22Q9BUU2 404 aaPredicted RBP21.83■■□□□ 1.09
APOBEC3A-204ENST00000495988 DUOX1Q9NRD9 1551 aa21.82■■□□□ 1.08
APOBEC3A-204ENST00000495988 HSP90B1P14625 803 aaKnown RBP21.82■■□□□ 1.08
APOBEC3A-204ENST00000495988 STK31Q9BXU1 1019 aa21.82■■□□□ 1.08
APOBEC3A-204ENST00000495988 CWC25Q9NXE8 425 aaPredicted RBP21.82■■□□□ 1.08
APOBEC3A-204ENST00000495988 COL4A1P02462 1669 aa21.82■■□□□ 1.08
APOBEC3A-204ENST00000495988 TMEM88BA6NKF7 163 aa21.81■■□□□ 1.08
APOBEC3A-204ENST00000495988 PCCAP05165 728 aaPredicted RBP21.81■■□□□ 1.08
APOBEC3A-204ENST00000495988 CIAPIN1Q6FI81 312 aa21.81■■□□□ 1.08
APOBEC3A-204ENST00000495988 USP50Q70EL3 339 aaPredicted RBP21.81■■□□□ 1.08
APOBEC3A-204ENST00000495988 NSFL1CQ9UNZ2 370 aaKnown RBP21.81■■□□□ 1.08
APOBEC3A-204ENST00000495988 MAP3K2Q9Y2U5 619 aa21.81■■□□□ 1.08
APOBEC3A-204ENST00000495988 IL16Q14005 1332 aa21.8■■□□□ 1.08
APOBEC3A-204ENST00000495988 TWISTNBQ3B726 338 aaPredicted RBP21.8■■□□□ 1.08
APOBEC3A-204ENST00000495988 NCBP3Q53F19 620 aaKnown RBP21.8■■□□□ 1.08
APOBEC3A-204ENST00000495988 GPRC5DQ9NZD1 345 aa21.8■■□□□ 1.08
APOBEC3A-204ENST00000495988 RAD17O75943 681 aa21.79■■□□□ 1.08
APOBEC3A-204ENST00000495988 HSPA1AP0DMV8 641 aaKnown RBP21.79■■□□□ 1.08
APOBEC3A-204ENST00000495988 HSPA1BP0DMV9 641 aaKnown RBP21.79■■□□□ 1.08
APOBEC3A-204ENST00000495988 GMPSP49915 693 aaPredicted RBP21.79■■□□□ 1.08
APOBEC3A-204ENST00000495988 RPS8P62241 208 aaKnown RBP21.79■■□□□ 1.08
APOBEC3A-204ENST00000495988 KSR2Q6VAB6 950 aa21.79■■□□□ 1.08
APOBEC3A-204ENST00000495988 JARID2Q92833 1246 aaPredicted RBP21.79■■□□□ 1.08
APOBEC3A-204ENST00000495988 CNTNAP1P78357 1384 aa21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 PI4KAP2A4QPH2 592 aa21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 PDE8AO60658 829 aa21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 GPSM2P81274 684 aa21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 TNIP1Q15025 636 aa21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 WASHC4Q2M389 1173 aa21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 PI4KAP1Q8N8J0 262 aa21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 SEC31BQ9NQW1 1179 aa21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 ADARB2Q9NS39 739 aaKnown RBP21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 SALL2Q9Y467 1007 aaPredicted RBP21.78■■□□□ 1.08
APOBEC3A-204ENST00000495988 C6orf229H3BNL8 230 aa21.77■■□□□ 1.08
APOBEC3A-204ENST00000495988 CCDC152Q4G0S7 254 aa21.77■■□□□ 1.08
APOBEC3A-204ENST00000495988 BCL2L13Q9BXK5 485 aa21.77■■□□□ 1.08
APOBEC3A-204ENST00000495988 YDJCA8MPS7 323 aa21.76■■□□□ 1.07
APOBEC3A-204ENST00000495988 RIMBP2O15034 1052 aa21.76■■□□□ 1.07
APOBEC3A-204ENST00000495988 NEXNQ0ZGT2 675 aa21.76■■□□□ 1.07
APOBEC3A-204ENST00000495988 POLLQ9UGP5 575 aa21.76■■□□□ 1.07
APOBEC3A-204ENST00000495988 CDHR2Q9BYE9 1310 aa21.76■■□□□ 1.07
APOBEC3A-204ENST00000495988 SLC4A2P04920 1241 aa21.75■■□□□ 1.07
APOBEC3A-204ENST00000495988 G2E3Q7L622 706 aa21.75■■□□□ 1.07
APOBEC3A-204ENST00000495988 CCDC85AQ96PX6 553 aaPredicted RBP21.75■■□□□ 1.07
APOBEC3A-204ENST00000495988 EYA3Q99504 573 aa21.75■■□□□ 1.07
APOBEC3A-204ENST00000495988 DBNDD1Q9H9R9 158 aa21.75■■□□□ 1.07
APOBEC3A-204ENST00000495988 FANCIQ9NVI1 1328 aa21.75■■□□□ 1.07
APOBEC3A-204ENST00000495988 IGKV5-2P06315 115 aa21.74■■□□□ 1.07
APOBEC3A-204ENST00000495988 COL13A1Q5TAT6 717 aaPredicted RBP21.74■■□□□ 1.07
APOBEC3A-204ENST00000495988 TBC1D16Q8TBP0 767 aa21.74■■□□□ 1.07
APOBEC3A-204ENST00000495988 PCNTO95613 3336 aa21.73■■□□□ 1.07
APOBEC3A-204ENST00000495988 WDR63Q8IWG1 891 aa21.73■■□□□ 1.07
APOBEC3A-204ENST00000495988 VEGFBP49765 207 aa21.72■■□□□ 1.07
APOBEC3A-204ENST00000495988 FMR1Q06787 632 aaKnown RBP eCLIP21.72■■□□□ 1.07
APOBEC3A-204ENST00000495988 CWF19L2Q2TBE0 894 aaKnown RBP21.72■■□□□ 1.07
APOBEC3A-204ENST00000495988 GPR101Q96P66 508 aaPredicted RBP21.72■■□□□ 1.07
APOBEC3A-204ENST00000495988 PODXL2Q9NZ53 605 aa21.72■■□□□ 1.07
APOBEC3A-204ENST00000495988 ANKIB1Q9P2G1 1089 aa21.72■■□□□ 1.07
APOBEC3A-204ENST00000495988 ABT1Q9ULW3 272 aaKnown RBP21.72■■□□□ 1.07
APOBEC3A-204ENST00000495988 RASSF10A6NK89 507 aa21.71■■□□□ 1.07
APOBEC3A-204ENST00000495988 PSMD14O00487 310 aa21.71■■□□□ 1.07
APOBEC3A-204ENST00000495988 ECE2O60344 883 aa21.71■■□□□ 1.07
APOBEC3A-204ENST00000495988 CTSWP56202 376 aa21.71■■□□□ 1.07
APOBEC3A-204ENST00000495988 DOK7Q18PE1 504 aa21.71■■□□□ 1.07
APOBEC3A-204ENST00000495988 DEFB115Q30KQ5 88 aa21.71■■□□□ 1.07
APOBEC3A-204ENST00000495988 ANKRD18AQ8IVF6 992 aa21.71■■□□□ 1.07
APOBEC3A-204ENST00000495988 ZC3H12CQ9C0D7 883 aaKnown RBP21.71■■□□□ 1.07
APOBEC3A-204ENST00000495988 CNOT7Q9UIV1 285 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms