RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 CT47B1P0C2W7 299 aaPredicted RBP15.78■□□□□ 0.12
MRPL55-233ENST00000495899 SF3B3Q15393 1217 aaKnown RBP15.78■□□□□ 0.12
MRPL55-233ENST00000495899 CCDC93Q567U6 631 aa15.78■□□□□ 0.12
MRPL55-233ENST00000495899 ANKRD36CQ5JPF3 1778 aa15.77■□□□□ 0.12
MRPL55-233ENST00000495899 ZC3H4Q9UPT8 1303 aaKnown RBP15.77■□□□□ 0.12
MRPL55-233ENST00000495899 IRS4O14654 1257 aaPredicted RBP15.77■□□□□ 0.12
MRPL55-233ENST00000495899 DNAAF4Q8WXU2 420 aa15.77■□□□□ 0.12
MRPL55-233ENST00000495899 TAOK3Q9H2K8 898 aa15.77■□□□□ 0.12
MRPL55-233ENST00000495899 RNF181Q9P0P0 153 aa15.77■□□□□ 0.12
MRPL55-233ENST00000495899 NEURL1BA8MQ27 555 aa15.76■□□□□ 0.11
MRPL55-233ENST00000495899 RASSF7Q02833 373 aa15.76■□□□□ 0.11
MRPL55-233ENST00000495899 DDX46Q7L014 1031 aaKnown RBP15.76■□□□□ 0.11
MRPL55-233ENST00000495899 LINS1Q8NG48 757 aa15.76■□□□□ 0.11
MRPL55-233ENST00000495899 TMX4Q9H1E5 349 aaPredicted RBP15.76■□□□□ 0.11
MRPL55-233ENST00000495899 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
MRPL55-233ENST00000495899 ARFGEF2Q9Y6D5 1785 aa15.75■□□□□ 0.11
MRPL55-233ENST00000495899 PPEF1O14829 653 aaPredicted RBP15.75■□□□□ 0.11
MRPL55-233ENST00000495899 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
MRPL55-233ENST00000495899 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
MRPL55-233ENST00000495899 TMC4Q7Z404 712 aa15.75■□□□□ 0.11
MRPL55-233ENST00000495899 ABCC4O15439 1325 aa15.74■□□□□ 0.11
MRPL55-233ENST00000495899 CDHR2Q9BYE9 1310 aa15.74■□□□□ 0.11
MRPL55-233ENST00000495899 SLX4Q8IY92 1834 aa15.74■□□□□ 0.11
MRPL55-233ENST00000495899 PDE8AO60658 829 aa15.74■□□□□ 0.11
MRPL55-233ENST00000495899 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
MRPL55-233ENST00000495899 FKBP4Q02790 459 aaKnown RBP eCLIP15.74■□□□□ 0.11
MRPL55-233ENST00000495899 GCKRQ14397 625 aa15.74■□□□□ 0.11
MRPL55-233ENST00000495899 CWF19L2Q2TBE0 894 aaKnown RBP15.74■□□□□ 0.11
MRPL55-233ENST00000495899 MRPL50Q8N5N7 158 aaKnown RBP15.74■□□□□ 0.11
MRPL55-233ENST00000495899 GPBP1L1Q9HC44 474 aaPredicted RBP15.74■□□□□ 0.11
MRPL55-233ENST00000495899 ATP6V0A2Q9Y487 856 aa15.74■□□□□ 0.11
MRPL55-233ENST00000495899 H7C1W4 665 aa15.73■□□□□ 0.11
MRPL55-233ENST00000495899 PRELPP51888 382 aa15.73■□□□□ 0.11
MRPL55-233ENST00000495899 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
MRPL55-233ENST00000495899 GRAPQ13588 217 aa15.73■□□□□ 0.11
MRPL55-233ENST00000495899 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
MRPL55-233ENST00000495899 PSMD1Q99460 953 aa15.73■□□□□ 0.11
MRPL55-233ENST00000495899 PTPRCP08575 1304 aa15.72■□□□□ 0.11
MRPL55-233ENST00000495899 BEND3Q5T5X7 828 aa15.72■□□□□ 0.11
MRPL55-233ENST00000495899 OLFM4Q6UX06 510 aa15.72■□□□□ 0.11
MRPL55-233ENST00000495899 SP8Q8IXZ3 490 aa15.72■□□□□ 0.11
MRPL55-233ENST00000495899 SSH1Q8WYL5 1049 aa15.72■□□□□ 0.11
MRPL55-233ENST00000495899 F6X3S4 739 aa15.71■□□□□ 0.11
MRPL55-233ENST00000495899 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
MRPL55-233ENST00000495899 CHRDL2Q6WN34 429 aa15.71■□□□□ 0.11
MRPL55-233ENST00000495899 KDM2BQ8NHM5 1336 aa15.7■□□□□ 0.1
MRPL55-233ENST00000495899 SNED1Q8TER0 1413 aa15.7■□□□□ 0.1
MRPL55-233ENST00000495899 CACNA1FO60840 1977 aa15.7■□□□□ 0.1
MRPL55-233ENST00000495899 ALDH1L1O75891 902 aa15.7■□□□□ 0.1
MRPL55-233ENST00000495899 RPS8P62241 208 aaKnown RBP15.7■□□□□ 0.1
MRPL55-233ENST00000495899 ZNF526Q8TF50 670 aaPredicted RBP15.7■□□□□ 0.1
MRPL55-233ENST00000495899 JARID2Q92833 1246 aaPredicted RBP15.7■□□□□ 0.1
MRPL55-233ENST00000495899 VPS33BQ9H267 617 aa15.7■□□□□ 0.1
MRPL55-233ENST00000495899 BRPF1P55201 1214 aaPredicted RBP15.69■□□□□ 0.1
MRPL55-233ENST00000495899 DPY19L2Q6NUT2 758 aa15.69■□□□□ 0.1
MRPL55-233ENST00000495899 UBE3BQ7Z3V4 1068 aa15.69■□□□□ 0.1
MRPL55-233ENST00000495899 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
MRPL55-233ENST00000495899 PLA2G12BQ9BX93 195 aa15.69■□□□□ 0.1
MRPL55-233ENST00000495899 FER1L6Q2WGJ9 1857 aa15.68■□□□□ 0.1
MRPL55-233ENST00000495899 GLTPD2A6NH11 291 aa15.68■□□□□ 0.1
MRPL55-233ENST00000495899 IARSP41252 1262 aaKnown RBP15.68■□□□□ 0.1
MRPL55-233ENST00000495899 CASP7P55210 303 aa15.68■□□□□ 0.1
MRPL55-233ENST00000495899 CTSWP56202 376 aa15.68■□□□□ 0.1
MRPL55-233ENST00000495899 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
MRPL55-233ENST00000495899 TTLL11Q8NHH1 800 aa15.68■□□□□ 0.1
MRPL55-233ENST00000495899 CELF1Q92879 486 aaKnown RBP15.68■□□□□ 0.1
MRPL55-233ENST00000495899 RTFDC1Q9BY42 306 aaPredicted RBP15.68■□□□□ 0.1
MRPL55-233ENST00000495899 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
MRPL55-233ENST00000495899 ZNF277Q9NRM2 450 aaPredicted RBP15.68■□□□□ 0.1
MRPL55-233ENST00000495899 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
MRPL55-233ENST00000495899 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
MRPL55-233ENST00000495899 NUBP1P53384 320 aa15.67■□□□□ 0.1
MRPL55-233ENST00000495899 SLC4A10Q6U841 1118 aa15.67■□□□□ 0.1
MRPL55-233ENST00000495899 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-233ENST00000495899 MPNDQ8N594 471 aa15.67■□□□□ 0.1
MRPL55-233ENST00000495899 CIZ1Q9ULV3 898 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-233ENST00000495899 ZBED9Q6R2W3 1325 aa15.67■□□□□ 0.1
MRPL55-233ENST00000495899 DDX60Q8IY21 1712 aaKnown RBP15.66■□□□□ 0.1
MRPL55-233ENST00000495899 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
MRPL55-233ENST00000495899 GRM8O00222 908 aa15.66■□□□□ 0.1
MRPL55-233ENST00000495899 CSF1RP07333 972 aa15.66■□□□□ 0.1
MRPL55-233ENST00000495899 RARSP54136 660 aaKnown RBP15.66■□□□□ 0.1
MRPL55-233ENST00000495899 JDP2Q8WYK2 163 aa15.66■□□□□ 0.1
MRPL55-233ENST00000495899 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
MRPL55-233ENST00000495899 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
MRPL55-233ENST00000495899 SBF1O95248 1867 aa15.65■□□□□ 0.1
MRPL55-233ENST00000495899 CDC5LQ99459 802 aaKnown RBP15.65■□□□□ 0.1
MRPL55-233ENST00000495899 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
MRPL55-233ENST00000495899 FZD9O00144 591 aa15.64■□□□□ 0.09
MRPL55-233ENST00000495899 KIF3CO14782 793 aa15.64■□□□□ 0.09
MRPL55-233ENST00000495899 ANKRD18AQ8IVF6 992 aa15.64■□□□□ 0.09
MRPL55-233ENST00000495899 LAMB2P55268 1798 aa15.64■□□□□ 0.09
MRPL55-233ENST00000495899 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
MRPL55-233ENST00000495899 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
MRPL55-233ENST00000495899 SLC51AQ86UW1 340 aa15.63■□□□□ 0.09
MRPL55-233ENST00000495899 LARGE2Q8N3Y3 721 aa15.63■□□□□ 0.09
MRPL55-233ENST00000495899 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
MRPL55-233ENST00000495899 CCDC85AQ96PX6 553 aaPredicted RBP15.63■□□□□ 0.09
MRPL55-233ENST00000495899 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
MRPL55-233ENST00000495899 GREM2Q9H772 168 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms