RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 FANCIQ9NVI1 1328 aa31.12■■■□□ 2.57
HLA-C-209ENST00000495835 EIF6P56537 245 aaKnown RBP31.11■■■□□ 2.57
HLA-C-209ENST00000495835 ZNF541Q9H0D2 1346 aa31.11■■■□□ 2.57
HLA-C-209ENST00000495835 DPP8Q6V1X1 898 aaPredicted RBP31.1■■■□□ 2.57
HLA-C-209ENST00000495835 MPNDQ8N594 471 aa31.1■■■□□ 2.57
HLA-C-209ENST00000495835 MAP3K2Q9Y2U5 619 aa31.1■■■□□ 2.57
HLA-C-209ENST00000495835 PI4KAP2A4QPH2 592 aa31.09■■■□□ 2.57
HLA-C-209ENST00000495835 SLC4A2P04920 1241 aa31.09■■■□□ 2.57
HLA-C-209ENST00000495835 PI4KAP1Q8N8J0 262 aa31.09■■■□□ 2.57
HLA-C-209ENST00000495835 SALL2Q9Y467 1007 aaPredicted RBP31.09■■■□□ 2.57
HLA-C-209ENST00000495835 NEXNQ0ZGT2 675 aa31.08■■■□□ 2.57
HLA-C-209ENST00000495835 TAF1DQ9H5J8 278 aaPredicted RBP31.08■■■□□ 2.57
HLA-C-209ENST00000495835 PPIP5K2O43314 1243 aa31.07■■■□□ 2.56
HLA-C-209ENST00000495835 NIM1KQ8IY84 436 aa31.07■■■□□ 2.56
HLA-C-209ENST00000495835 DNAJC5GQ8N7S2 189 aa31.07■■■□□ 2.56
HLA-C-209ENST00000495835 MYH16Q9H6N6 1097 aa31.07■■■□□ 2.56
HLA-C-209ENST00000495835 HACL1Q9UJ83 578 aa31.07■■■□□ 2.56
HLA-C-209ENST00000495835 TAF1P21675 1872 aa31.07■■■□□ 2.56
HLA-C-209ENST00000495835 LRRC37AA6NMS7 1700 aa31.07■■■□□ 2.56
HLA-C-209ENST00000495835 VAMP4O75379 141 aa31.06■■■□□ 2.56
HLA-C-209ENST00000495835 RTL5Q5HYW3 569 aaPredicted RBP31.06■■■□□ 2.56
HLA-C-209ENST00000495835 CHADLQ6NUI6 762 aa31.06■■■□□ 2.56
HLA-C-209ENST00000495835 ZNF428Q96B54 188 aa31.06■■■□□ 2.56
HLA-C-209ENST00000495835 PDE8AO60658 829 aa31.05■■■□□ 2.56
HLA-C-209ENST00000495835 COL4A5P29400 1685 aa31.05■■■□□ 2.56
HLA-C-209ENST00000495835 CDHR2Q9BYE9 1310 aa31.04■■■□□ 2.56
HLA-C-209ENST00000495835 PNMA8AQ86V59 439 aaPredicted RBP31.04■■■□□ 2.56
HLA-C-209ENST00000495835 LDHDQ86WU2 507 aa31.04■■■□□ 2.56
HLA-C-209ENST00000495835 RPS8P62241 208 aaKnown RBP31.03■■■□□ 2.56
HLA-C-209ENST00000495835 EXOSC9Q06265 439 aaKnown RBP31.03■■■□□ 2.56
HLA-C-209ENST00000495835 KIAA2012Q0VF49 1180 aa31.03■■■□□ 2.56
HLA-C-209ENST00000495835 AOC3Q16853 763 aa31.03■■■□□ 2.56
HLA-C-209ENST00000495835 SLC51AQ86UW1 340 aa31.03■■■□□ 2.56
HLA-C-209ENST00000495835 CELF1Q92879 486 aaKnown RBP31.03■■■□□ 2.56
HLA-C-209ENST00000495835 IGKV5-2P06315 115 aa31.02■■■□□ 2.56
HLA-C-209ENST00000495835 FLIIQ13045 1269 aa31.02■■■□□ 2.56
HLA-C-209ENST00000495835 CCDC152Q4G0S7 254 aa31.02■■■□□ 2.56
HLA-C-209ENST00000495835 ZNRF3Q9ULT6 936 aa31.02■■■□□ 2.56
HLA-C-209ENST00000495835 EPHX2P34913 555 aa31.01■■■□□ 2.55
HLA-C-209ENST00000495835 G2E3Q7L622 706 aa31.01■■■□□ 2.55
HLA-C-209ENST00000495835 GJA3Q9Y6H8 435 aa30.99■■■□□ 2.55
HLA-C-209ENST00000495835 NEURL1BA8MQ27 555 aa30.98■■■□□ 2.55
HLA-C-209ENST00000495835 LMOD1P29536 600 aaPredicted RBP30.98■■■□□ 2.55
HLA-C-209ENST00000495835 SPINK5Q9NQ38 1064 aaPredicted RBP30.98■■■□□ 2.55
HLA-C-209ENST00000495835 ZNF521Q96K83 1311 aa30.98■■■□□ 2.55
HLA-C-209ENST00000495835 POTEIP0CG38 1075 aa30.97■■■□□ 2.55
HLA-C-209ENST00000495835 POTEJP0CG39 1038 aa30.97■■■□□ 2.55
HLA-C-209ENST00000495835 NSFL1CQ9UNZ2 370 aaKnown RBP30.97■■■□□ 2.55
HLA-C-209ENST00000495835 FKBP5Q13451 457 aaPredicted RBP30.96■■■□□ 2.55
HLA-C-209ENST00000495835 KLRG1Q96E93 195 aa30.96■■■□□ 2.55
HLA-C-209ENST00000495835 DUOX1Q9NRD9 1551 aa30.96■■■□□ 2.55
HLA-C-209ENST00000495835 ADAMTSL1Q8N6G6 1762 aa30.95■■■□□ 2.55
HLA-C-209ENST00000495835 DNAAF4Q8WXU2 420 aa30.95■■■□□ 2.55
HLA-C-209ENST00000495835 PODXL2Q9NZ53 605 aa30.95■■■□□ 2.55
HLA-C-209ENST00000495835 MYH3P11055 1940 aa30.94■■■□□ 2.54
HLA-C-209ENST00000495835 H7C1W4 665 aa30.94■■■□□ 2.54
HLA-C-209ENST00000495835 CXCL9Q07325 125 aa30.94■■■□□ 2.54
HLA-C-209ENST00000495835 WASHC4Q2M389 1173 aa30.94■■■□□ 2.54
HLA-C-209ENST00000495835 CWF19L2Q2TBE0 894 aaKnown RBP30.94■■■□□ 2.54
HLA-C-209ENST00000495835 EAPPQ56P03 285 aaPredicted RBP30.94■■■□□ 2.54
HLA-C-209ENST00000495835 LINS1Q8NG48 757 aa30.94■■■□□ 2.54
HLA-C-209ENST00000495835 EYA3Q99504 573 aa30.94■■■□□ 2.54
HLA-C-209ENST00000495835 SEC31BQ9NQW1 1179 aa30.94■■■□□ 2.54
HLA-C-209ENST00000495835 SCNN1DP51172 638 aa30.93■■■□□ 2.54
HLA-C-209ENST00000495835 TNIP1Q15025 636 aa30.93■■■□□ 2.54
HLA-C-209ENST00000495835 CTSWP56202 376 aa30.92■■■□□ 2.54
HLA-C-209ENST00000495835 CIAPIN1Q6FI81 312 aa30.92■■■□□ 2.54
HLA-C-209ENST00000495835 LTBP1Q14766 1721 aa30.92■■■□□ 2.54
HLA-C-209ENST00000495835 GPSM2P81274 684 aa30.91■■■□□ 2.54
HLA-C-209ENST00000495835 HTRA3P83110 453 aa30.91■■■□□ 2.54
HLA-C-209ENST00000495835 GCKRQ14397 625 aa30.91■■■□□ 2.54
HLA-C-209ENST00000495835 USP50Q70EL3 339 aaPredicted RBP30.91■■■□□ 2.54
HLA-C-209ENST00000495835 TTLL11Q8NHH1 800 aa30.91■■■□□ 2.54
HLA-C-209ENST00000495835 JARID2Q92833 1246 aaPredicted RBP30.91■■■□□ 2.54
HLA-C-209ENST00000495835 CDC5LQ99459 802 aaKnown RBP30.91■■■□□ 2.54
HLA-C-209ENST00000495835 CLEC11AQ9Y240 323 aa30.91■■■□□ 2.54
HLA-C-209ENST00000495835 RTL9Q8NET4 1388 aa30.91■■■□□ 2.54
HLA-C-209ENST00000495835 COL4A1P02462 1669 aa30.9■■■□□ 2.54
HLA-C-209ENST00000495835 C6orf229H3BNL8 230 aa30.9■■■□□ 2.54
HLA-C-209ENST00000495835 ANKRD18AQ8IVF6 992 aa30.9■■■□□ 2.54
HLA-C-209ENST00000495835 JMYQ8N9B5 988 aa30.9■■■□□ 2.54
HLA-C-209ENST00000495835 PLA2G12BQ9BX93 195 aa30.9■■■□□ 2.54
HLA-C-209ENST00000495835 POLLQ9UGP5 575 aa30.9■■■□□ 2.54
HLA-C-209ENST00000495835 PASKQ96RG2 1323 aa30.9■■■□□ 2.54
HLA-C-209ENST00000495835 ITGBL1O95965 494 aaPredicted RBP30.89■■■□□ 2.54
HLA-C-209ENST00000495835 TBC1D16Q8TBP0 767 aa30.89■■■□□ 2.54
HLA-C-209ENST00000495835 CREBZFQ9NS37 354 aa30.89■■■□□ 2.54
HLA-C-209ENST00000495835 EPS15P42566 896 aa30.88■■■□□ 2.53
HLA-C-209ENST00000495835 GPRC5DQ9NZD1 345 aa30.88■■■□□ 2.53
HLA-C-209ENST00000495835 CCER2I3L3R5 266 aa30.87■■■□□ 2.53
HLA-C-209ENST00000495835 UBE3BQ7Z3V4 1068 aa30.87■■■□□ 2.53
HLA-C-209ENST00000495835 ADARB2Q9NS39 739 aaKnown RBP30.87■■■□□ 2.53
HLA-C-209ENST00000495835 ZC3H12CQ9C0D7 883 aaKnown RBP30.86■■■□□ 2.53
HLA-C-209ENST00000495835 ANKIB1Q9P2G1 1089 aa30.86■■■□□ 2.53
HLA-C-209ENST00000495835 E9PSI1 815 aa30.85■■■□□ 2.53
HLA-C-209ENST00000495835 CNTROBQ8N137 903 aa30.85■■■□□ 2.53
HLA-C-209ENST00000495835 BSDC1Q9NW68 430 aaPredicted RBP30.85■■■□□ 2.53
HLA-C-209ENST00000495835 GGA1Q9UJY5 639 aa30.85■■■□□ 2.53
HLA-C-209ENST00000495835 YDJCA8MPS7 323 aa30.84■■■□□ 2.53
HLA-C-209ENST00000495835 CASP7P55210 303 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms