RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 SASH1O94885 1247 aa29.96■■■□□ 2.39
PPP1R3F-205ENST00000495799 SYNE4Q8N205 404 aa29.96■■■□□ 2.39
PPP1R3F-205ENST00000495799 RBM19Q9Y4C8 960 aaKnown RBP29.96■■■□□ 2.39
PPP1R3F-205ENST00000495799 IFIT2P09913 472 aaKnown RBP29.96■■■□□ 2.39
PPP1R3F-205ENST00000495799 IL15P40933 162 aaPredicted RBP29.96■■■□□ 2.39
PPP1R3F-205ENST00000495799 SMIM5Q71RC9 77 aa29.96■■■□□ 2.39
PPP1R3F-205ENST00000495799 ANKRD18BA2A2Z9 1011 aa29.95■■■□□ 2.38
PPP1R3F-205ENST00000495799 AMIGO3Q86WK7 504 aa29.95■■■□□ 2.38
PPP1R3F-205ENST00000495799 EYA2O00167 538 aa29.94■■■□□ 2.38
PPP1R3F-205ENST00000495799 TTC41PQ6P2S7 1318 aa29.94■■■□□ 2.38
PPP1R3F-205ENST00000495799 BICDL1Q6ZP65 573 aa29.93■■■□□ 2.38
PPP1R3F-205ENST00000495799 NUTM1Q86Y26 1132 aa29.93■■■□□ 2.38
PPP1R3F-205ENST00000495799 GTF2E1P29083 439 aaPredicted RBP29.92■■■□□ 2.38
PPP1R3F-205ENST00000495799 CCDC152Q4G0S7 254 aa29.92■■■□□ 2.38
PPP1R3F-205ENST00000495799 AACSQ86V21 672 aa29.92■■■□□ 2.38
PPP1R3F-205ENST00000495799 FLAD1Q8NFF5 587 aa29.92■■■□□ 2.38
PPP1R3F-205ENST00000495799 EP400Q96L91 3159 aa29.92■■■□□ 2.38
PPP1R3F-205ENST00000495799 EIF5BO60841 1220 aaKnown RBP29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 GSPT1P15170 499 aaKnown RBP29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 ITGA6P23229 1130 aa29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 GREM2Q9H772 168 aa29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 CARMIL3Q8ND23 1372 aa29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 RTL9Q8NET4 1388 aa29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 HCLS1P14317 486 aaPredicted RBP29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 TPTE2Q6XPS3 522 aa29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 NBPF5PQ86XG9 351 aaPredicted RBP29.91■■■□□ 2.38
PPP1R3F-205ENST00000495799 ERC2O15083 957 aa29.9■■■□□ 2.38
PPP1R3F-205ENST00000495799 SF3B2Q13435 895 aaKnown RBP29.9■■■□□ 2.38
PPP1R3F-205ENST00000495799 AKT1S1Q96B36 256 aa29.9■■■□□ 2.38
PPP1R3F-205ENST00000495799 GPR108Q9NPR9 543 aa29.9■■■□□ 2.38
PPP1R3F-205ENST00000495799 TFCP2L1Q9NZI6 479 aa29.9■■■□□ 2.38
PPP1R3F-205ENST00000495799 CCDC85AQ96PX6 553 aaPredicted RBP29.89■■■□□ 2.38
PPP1R3F-205ENST00000495799 TFCP2Q12800 502 aa29.88■■■□□ 2.37
PPP1R3F-205ENST00000495799 ERFEQ4G0M1 354 aa29.88■■■□□ 2.37
PPP1R3F-205ENST00000495799 SLC10A5Q5PT55 438 aa29.88■■■□□ 2.37
PPP1R3F-205ENST00000495799 ATG9AQ7Z3C6 839 aa29.88■■■□□ 2.37
PPP1R3F-205ENST00000495799 ZNF594Q96JF6 807 aaPredicted RBP29.88■■■□□ 2.37
PPP1R3F-205ENST00000495799 CDC45O75419 566 aa29.87■■■□□ 2.37
PPP1R3F-205ENST00000495799 ECHDC1Q9NTX5 307 aa29.87■■■□□ 2.37
PPP1R3F-205ENST00000495799 TUBGCP6Q96RT7 1819 aa29.87■■■□□ 2.37
PPP1R3F-205ENST00000495799 GLRX3O76003 335 aaKnown RBP29.86■■■□□ 2.37
PPP1R3F-205ENST00000495799 TNNI3KQ59H18 835 aa29.86■■■□□ 2.37
PPP1R3F-205ENST00000495799 EAF2Q96CJ1 260 aaPredicted RBP29.86■■■□□ 2.37
PPP1R3F-205ENST00000495799 UPF2Q9HAU5 1272 aaKnown RBP29.86■■■□□ 2.37
PPP1R3F-205ENST00000495799 FPGT-TNNI3KV9GXZ4 949 aa29.86■■■□□ 2.37
PPP1R3F-205ENST00000495799 GYS1P13807 737 aa29.86■■■□□ 2.37
PPP1R3F-205ENST00000495799 CASC1Q6TDU7 716 aa29.86■■■□□ 2.37
PPP1R3F-205ENST00000495799 CEP126Q9P2H0 1117 aa29.86■■■□□ 2.37
PPP1R3F-205ENST00000495799 LRP5O75197 1615 aa29.85■■■□□ 2.37
PPP1R3F-205ENST00000495799 ZNF827Q17R98 1081 aa29.85■■■□□ 2.37
PPP1R3F-205ENST00000495799 LRRC24Q50LG9 513 aa29.85■■■□□ 2.37
PPP1R3F-205ENST00000495799 NPHP1O15259 732 aa29.84■■■□□ 2.37
PPP1R3F-205ENST00000495799 SDSP20132 328 aa29.84■■■□□ 2.37
PPP1R3F-205ENST00000495799 BAG6P46379 1132 aa29.84■■■□□ 2.37
PPP1R3F-205ENST00000495799 NFIXQ14938 502 aa29.84■■■□□ 2.37
PPP1R3F-205ENST00000495799 SF3B3Q15393 1217 aaKnown RBP29.84■■■□□ 2.37
PPP1R3F-205ENST00000495799 LDHAL6AQ6ZMR3 332 aa29.84■■■□□ 2.37
PPP1R3F-205ENST00000495799 AKAP2Q9Y2D5 859 aa29.84■■■□□ 2.37
PPP1R3F-205ENST00000495799 PI4K2BQ8TCG2 481 aa29.83■■■□□ 2.37
PPP1R3F-205ENST00000495799 CNNM1Q9NRU3 951 aa29.83■■■□□ 2.37
PPP1R3F-205ENST00000495799 TSHZ3Q63HK5 1081 aa29.82■■■□□ 2.36
PPP1R3F-205ENST00000495799 CCDC8Q9H0W5 538 aaPredicted RBP29.82■■■□□ 2.36
PPP1R3F-205ENST00000495799 CASZ1Q86V15 1759 aa29.82■■■□□ 2.36
PPP1R3F-205ENST00000495799 NLRP3Q96P20 1036 aa29.81■■■□□ 2.36
PPP1R3F-205ENST00000495799 CAMKK2Q96RR4 588 aa29.81■■■□□ 2.36
PPP1R3F-205ENST00000495799 CDC5LQ99459 802 aaKnown RBP29.81■■■□□ 2.36
PPP1R3F-205ENST00000495799 PUS3Q9BZE2 481 aaKnown RBP29.81■■■□□ 2.36
PPP1R3F-205ENST00000495799 ZNF609O15014 1411 aa29.8■■■□□ 2.36
PPP1R3F-205ENST00000495799 RIC1Q4ADV7 1423 aa29.8■■■□□ 2.36
PPP1R3F-205ENST00000495799 ABCC12Q96J65 1359 aa29.8■■■□□ 2.36
PPP1R3F-205ENST00000495799 TRIM6-TRIM34B2RNG4 842 aa29.8■■■□□ 2.36
PPP1R3F-205ENST00000495799 IGHMBP2P38935 993 aaKnown RBP29.8■■■□□ 2.36
PPP1R3F-205ENST00000495799 CNBD1Q8NA66 436 aa29.8■■■□□ 2.36
PPP1R3F-205ENST00000495799 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.8■■■□□ 2.36
PPP1R3F-205ENST00000495799 EN1Q05925 392 aaPredicted RBP29.79■■■□□ 2.36
PPP1R3F-205ENST00000495799 MPHOSPH8Q99549 860 aa29.79■■■□□ 2.36
PPP1R3F-205ENST00000495799 RIPOR2Q9Y4F9 1068 aa29.79■■■□□ 2.36
PPP1R3F-205ENST00000495799 MROH5Q6ZUA9 1318 aa29.78■■■□□ 2.36
PPP1R3F-205ENST00000495799 EZH2Q15910 746 aaKnown RBP29.78■■■□□ 2.36
PPP1R3F-205ENST00000495799 METTL24Q5JXM2 366 aa29.78■■■□□ 2.36
PPP1R3F-205ENST00000495799 TBC1D9Q6ZT07 1266 aa29.78■■■□□ 2.36
PPP1R3F-205ENST00000495799 CNTROBQ8N137 903 aa29.78■■■□□ 2.36
PPP1R3F-205ENST00000495799 AK9Q5TCS8 1911 aa29.78■■■□□ 2.36
PPP1R3F-205ENST00000495799 QSER1Q2KHR3 1735 aa29.77■■■□□ 2.36
PPP1R3F-205ENST00000495799 TM4SF1P30408 202 aa29.77■■■□□ 2.36
PPP1R3F-205ENST00000495799 NLGN1Q8N2Q7 840 aa29.77■■■□□ 2.36
PPP1R3F-205ENST00000495799 MSH5O43196 834 aa29.76■■■□□ 2.36
PPP1R3F-205ENST00000495799 ST5P78524 1137 aa29.76■■■□□ 2.36
PPP1R3F-205ENST00000495799 RILPL2Q969X0 211 aa29.76■■■□□ 2.36
PPP1R3F-205ENST00000495799 STK32BQ9NY57 414 aa29.76■■■□□ 2.36
PPP1R3F-205ENST00000495799 DBNLQ9UJU6 430 aaKnown RBP29.76■■■□□ 2.36
PPP1R3F-205ENST00000495799 COL23A1Q86Y22 540 aaPredicted RBP29.76■■■□□ 2.35
PPP1R3F-205ENST00000495799 TLR7Q9NYK1 1049 aaKnown RBP29.76■■■□□ 2.35
PPP1R3F-205ENST00000495799 NEUROD6Q96NK8 337 aa29.75■■■□□ 2.35
PPP1R3F-205ENST00000495799 SERPINB2P05120 415 aa29.74■■■□□ 2.35
PPP1R3F-205ENST00000495799 ANP32AP39687 249 aaKnown RBP29.74■■■□□ 2.35
PPP1R3F-205ENST00000495799 CCDC125Q86Z20 511 aa29.74■■■□□ 2.35
PPP1R3F-205ENST00000495799 ANKRD18AQ8IVF6 992 aa29.74■■■□□ 2.35
PPP1R3F-205ENST00000495799 SEC31BQ9NQW1 1179 aa29.74■■■□□ 2.35
PPP1R3F-205ENST00000495799 SPEF2Q9C093 1822 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms