RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 ZNF34Q8IZ26 560 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 ZBTB38Q8NAP3 1195 aaPredicted RBP13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 KIF1BPQ96EK5 621 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 C10orf71Q711Q0 1435 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 CDHR2Q9BYE9 1310 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 A0A0G2JLW4 131 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 RPS6KA4O75676 772 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 FOXO4P98177 505 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 BMP2KLQ5H9B9 411 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 RHPN1Q8TCX5 695 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 KLRG1Q96E93 195 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 PLA2G12BQ9BX93 195 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 KIAA1551Q9HCM1 1747 aa13.24□□□□□ -0.29
ECHDC3-204ENST00000495787 MYH3P11055 1940 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 GPTP24298 496 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 RFX5P48382 616 aaPredicted RBP13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 OS9Q13438 667 aaPredicted RBP13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 PARP10Q53GL7 1025 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 TRAPPC3LQ5T215 181 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 JMYQ8N9B5 988 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 OSBPL3Q9H4L5 887 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 COPRSQ9NQ92 184 aa13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 RTCBQ9Y3I0 505 aaKnown RBP13.23□□□□□ -0.29
ECHDC3-204ENST00000495787 SCN7AQ01118 1682 aa13.22□□□□□ -0.29
ECHDC3-204ENST00000495787 SALL3Q9BXA9 1300 aa13.22□□□□□ -0.29
ECHDC3-204ENST00000495787 DPEP1P16444 411 aa13.22□□□□□ -0.29
ECHDC3-204ENST00000495787 FSTL1Q12841 308 aa13.22□□□□□ -0.29
ECHDC3-204ENST00000495787 COL13A1Q5TAT6 717 aaPredicted RBP13.22□□□□□ -0.29
ECHDC3-204ENST00000495787 OTUD7AQ8TE49 926 aaPredicted RBP13.22□□□□□ -0.29
ECHDC3-204ENST00000495787 PA2G4Q9UQ80 394 aaKnown RBP13.22□□□□□ -0.29
ECHDC3-204ENST00000495787 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
ECHDC3-204ENST00000495787 UBN2Q6ZU65 1347 aa13.21□□□□□ -0.29
ECHDC3-204ENST00000495787 ADRA2BP18089 450 aa13.21□□□□□ -0.29
ECHDC3-204ENST00000495787 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
ECHDC3-204ENST00000495787 TTC22Q5TAA0 569 aa13.21□□□□□ -0.29
ECHDC3-204ENST00000495787 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
ECHDC3-204ENST00000495787 FAM89AQ96GI7 184 aa13.21□□□□□ -0.29
ECHDC3-204ENST00000495787 AOX1Q06278 1338 aa13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 PDE1AP54750 535 aa13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 HTRA3P83110 453 aa13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 PTPN12Q05209 780 aaKnown RBP13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 IL1RAPL2Q9NP60 686 aa13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 STAP2Q9UGK3 403 aa13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 NARFQ9UHQ1 456 aa13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 TRMT112Q9UI30 125 aaKnown RBP13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 PARP3Q9Y6F1 533 aa13.2□□□□□ -0.3
ECHDC3-204ENST00000495787 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 CSF1RP07333 972 aa13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 MX1P20591 662 aa13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 CLASRPQ8N2M8 674 aaKnown RBP13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 ARHGEF1Q92888 912 aaKnown RBP13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 CHMP3Q9Y3E7 222 aa13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 LAMB2P55268 1798 aa13.19□□□□□ -0.3
ECHDC3-204ENST00000495787 PDE8AO60658 829 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 CAPN15O75808 1086 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 SASH1O94885 1247 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 GYS1P13807 737 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 GSPT1P15170 499 aaKnown RBP13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 RFC4P35249 363 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 KLHDC4Q8TBB5 520 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 SIL1Q9H173 461 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 PIM2Q9P1W9 311 aa13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 BRCA1P38398 1863 aaKnown RBP13.18□□□□□ -0.3
ECHDC3-204ENST00000495787 SH3TC1Q8TE82 1336 aa13.17□□□□□ -0.3
ECHDC3-204ENST00000495787 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
ECHDC3-204ENST00000495787 ZPR1O75312 459 aa13.17□□□□□ -0.3
ECHDC3-204ENST00000495787 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
ECHDC3-204ENST00000495787 NUTM1Q86Y26 1132 aa13.17□□□□□ -0.3
ECHDC3-204ENST00000495787 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
ECHDC3-204ENST00000495787 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
ECHDC3-204ENST00000495787 ARFGEF1Q9Y6D6 1849 aa13.17□□□□□ -0.3
ECHDC3-204ENST00000495787 DDX60Q8IY21 1712 aaKnown RBP13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 CIAO1O76071 339 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 NTSR2O95665 410 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 KCNA3P22001 575 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 PRELPP51888 382 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 CTSWP56202 376 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 CCDC57Q2TAC2 916 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 TTLL11Q8NHH1 800 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 RNF181Q9P0P0 153 aa13.16□□□□□ -0.3
ECHDC3-204ENST00000495787 TTC41PQ6P2S7 1318 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 PCNTO95613 3336 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 EYA2O00167 538 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 CDC45O75419 566 aa13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 IFIT2P09913 472 aaKnown RBP13.15□□□□□ -0.3
ECHDC3-204ENST00000495787 IL15P40933 162 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms