RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 RTL5Q5HYW3 569 aaPredicted RBP9.29□□□□□ -0.92
VPS52-221ENST00000495755 DPP8Q6V1X1 898 aaPredicted RBP9.29□□□□□ -0.92
VPS52-221ENST00000495755 KSR2Q6VAB6 950 aa9.29□□□□□ -0.92
VPS52-221ENST00000495755 TMC4Q7Z404 712 aa9.29□□□□□ -0.92
VPS52-221ENST00000495755 MPNDQ8N594 471 aa9.29□□□□□ -0.92
VPS52-221ENST00000495755 CCDC191Q8NCU4 936 aa9.29□□□□□ -0.92
VPS52-221ENST00000495755 SUPT20HQ8NEM7 779 aa9.29□□□□□ -0.92
VPS52-221ENST00000495755 MAP3K2Q9Y2U5 619 aa9.29□□□□□ -0.92
VPS52-221ENST00000495755 SALL2Q9Y467 1007 aaPredicted RBP9.29□□□□□ -0.92
VPS52-221ENST00000495755 FANCIQ9NVI1 1328 aa9.29□□□□□ -0.92
VPS52-221ENST00000495755 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
VPS52-221ENST00000495755 PI4KAP2A4QPH2 592 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 PPIP5K2O43314 1243 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 SLC4A2P04920 1241 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 IGKV5-2P06315 115 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 EIF6P56537 245 aaKnown RBP9.28□□□□□ -0.92
VPS52-221ENST00000495755 AOC3Q16853 763 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 G2E3Q7L622 706 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 LDHDQ86WU2 507 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 PI4KAP1Q8N8J0 262 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 CELF1Q92879 486 aaKnown RBP9.28□□□□□ -0.92
VPS52-221ENST00000495755 STK31Q9BXU1 1019 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 CWC25Q9NXE8 425 aaPredicted RBP9.28□□□□□ -0.92
VPS52-221ENST00000495755 HACL1Q9UJ83 578 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 SCN4AP35499 1836 aa9.28□□□□□ -0.92
VPS52-221ENST00000495755 VAMP4O75379 141 aa9.27□□□□□ -0.93
VPS52-221ENST00000495755 HSP90B1P14625 803 aaKnown RBP9.27□□□□□ -0.93
VPS52-221ENST00000495755 EPHX2P34913 555 aa9.27□□□□□ -0.93
VPS52-221ENST00000495755 RPS8P62241 208 aaKnown RBP9.27□□□□□ -0.93
VPS52-221ENST00000495755 KIAA2012Q0VF49 1180 aa9.27□□□□□ -0.93
VPS52-221ENST00000495755 NIM1KQ8IY84 436 aa9.27□□□□□ -0.93
VPS52-221ENST00000495755 FAM9BQ8IZU0 186 aa9.27□□□□□ -0.93
VPS52-221ENST00000495755 JARID2Q92833 1246 aaPredicted RBP9.27□□□□□ -0.93
VPS52-221ENST00000495755 KLRG1Q96E93 195 aa9.27□□□□□ -0.93
VPS52-221ENST00000495755 SPINK5Q9NQ38 1064 aaPredicted RBP9.27□□□□□ -0.93
VPS52-221ENST00000495755 ZNRF3Q9ULT6 936 aa9.27□□□□□ -0.93
VPS52-221ENST00000495755 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
VPS52-221ENST00000495755 TAF1P21675 1872 aa9.26□□□□□ -0.93
VPS52-221ENST00000495755 PDE8AO60658 829 aa9.26□□□□□ -0.93
VPS52-221ENST00000495755 ITGBL1O95965 494 aaPredicted RBP9.26□□□□□ -0.93
VPS52-221ENST00000495755 SCNN1DP51172 638 aa9.26□□□□□ -0.93
VPS52-221ENST00000495755 EXOSC9Q06265 439 aaKnown RBP9.26□□□□□ -0.93
VPS52-221ENST00000495755 CXCL9Q07325 125 aa9.26□□□□□ -0.93
VPS52-221ENST00000495755 PNMA8AQ86V59 439 aaPredicted RBP9.26□□□□□ -0.93
VPS52-221ENST00000495755 JMYQ8N9B5 988 aa9.26□□□□□ -0.93
VPS52-221ENST00000495755 SEC31BQ9NQW1 1179 aa9.26□□□□□ -0.93
VPS52-221ENST00000495755 CDHR2Q9BYE9 1310 aa9.26□□□□□ -0.93
VPS52-221ENST00000495755 COL4A1P02462 1669 aa9.26□□□□□ -0.93
VPS52-221ENST00000495755 NEURL1BA8MQ27 555 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 H7C1W4 665 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 EPS15P42566 896 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 GPSM2P81274 684 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 FLIIQ13045 1269 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 CWF19L2Q2TBE0 894 aaKnown RBP9.25□□□□□ -0.93
VPS52-221ENST00000495755 EAPPQ56P03 285 aaPredicted RBP9.25□□□□□ -0.93
VPS52-221ENST00000495755 POLLQ9UGP5 575 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
VPS52-221ENST00000495755 ZNF521Q96K83 1311 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 PASKQ96RG2 1323 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 LRRC37AA6NMS7 1700 aa9.25□□□□□ -0.93
VPS52-221ENST00000495755 DUOX1Q9NRD9 1551 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 ADAMTSL1Q8N6G6 1762 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 YDJCA8MPS7 323 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 LMOD1P29536 600 aaPredicted RBP9.24□□□□□ -0.93
VPS52-221ENST00000495755 NEXNQ0ZGT2 675 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 WASHC4Q2M389 1173 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 CCDC152Q4G0S7 254 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 TBC1D16Q8TBP0 767 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 MYH16Q9H6N6 1097 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 PODXL2Q9NZ53 605 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
VPS52-221ENST00000495755 LTBP1Q14766 1721 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 C6orf229H3BNL8 230 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 RAD17O75943 681 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 GMPSP49915 693 aaPredicted RBP9.23□□□□□ -0.93
VPS52-221ENST00000495755 CASP7P55210 303 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 CTSWP56202 376 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 FKBP5Q13451 457 aaPredicted RBP9.23□□□□□ -0.93
VPS52-221ENST00000495755 GCKRQ14397 625 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 TNIP1Q15025 636 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 MAP1SQ66K74 1059 aaPredicted RBP9.23□□□□□ -0.93
VPS52-221ENST00000495755 CIAPIN1Q6FI81 312 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 USP50Q70EL3 339 aaPredicted RBP9.23□□□□□ -0.93
VPS52-221ENST00000495755 CNTROBQ8N137 903 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 LINS1Q8NG48 757 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 TTLL11Q8NHH1 800 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 DNAAF4Q8WXU2 420 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
VPS52-221ENST00000495755 GPRC5DQ9NZD1 345 aa9.23□□□□□ -0.93
VPS52-221ENST00000495755 RIMBP2O15034 1052 aa9.22□□□□□ -0.93
VPS52-221ENST00000495755 UBE3BQ7Z3V4 1068 aa9.22□□□□□ -0.93
VPS52-221ENST00000495755 EYA3Q99504 573 aa9.22□□□□□ -0.93
VPS52-221ENST00000495755 PLA2G12BQ9BX93 195 aa9.22□□□□□ -0.93
VPS52-221ENST00000495755 GREM2Q9H772 168 aa9.22□□□□□ -0.93
VPS52-221ENST00000495755 ADARB2Q9NS39 739 aaKnown RBP9.22□□□□□ -0.93
VPS52-221ENST00000495755 RTL9Q8NET4 1388 aa9.22□□□□□ -0.93
VPS52-221ENST00000495755 TMEM88BA6NKF7 163 aa9.21□□□□□ -0.94
VPS52-221ENST00000495755 CSF1RP07333 972 aa9.21□□□□□ -0.94
VPS52-221ENST00000495755 DOK7Q18PE1 504 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms