RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 BBOX1O75936 387 aa15.76■□□□□ 0.11
SHROOM1-206ENST00000495680 CTCFP49711 727 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-206ENST00000495680 GMPSP49915 693 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-206ENST00000495680 USP50Q70EL3 339 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-206ENST00000495680 MPNDQ8N594 471 aa15.76■□□□□ 0.11
SHROOM1-206ENST00000495680 AIDAQ96BJ3 306 aa15.76■□□□□ 0.11
SHROOM1-206ENST00000495680 ATP5J2-PTCD1G3V325 749 aa15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 RAD17O75943 681 aa15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 HSPA8P11142 646 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 KIAA2012Q0VF49 1180 aa15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 GRAPQ13588 217 aa15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 DDX46Q7L014 1031 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 GRAPLQ8TC17 118 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 RUNDC1Q96C34 613 aa15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 TMX4Q9H1E5 349 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 ADARB2Q9NS39 739 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 ADAMTS8Q9UP79 889 aa15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 THSD7BQ9C0I4 1608 aa15.75■□□□□ 0.11
SHROOM1-206ENST00000495680 LRRC37AA6NMS7 1700 aa15.74■□□□□ 0.11
SHROOM1-206ENST00000495680 YDJCA8MPS7 323 aa15.74■□□□□ 0.11
SHROOM1-206ENST00000495680 GRM1Q13255 1194 aa15.74■□□□□ 0.11
SHROOM1-206ENST00000495680 HDGFL1Q5TGJ6 251 aa15.74■□□□□ 0.11
SHROOM1-206ENST00000495680 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
SHROOM1-206ENST00000495680 SUPT20HQ8NEM7 779 aa15.74■□□□□ 0.11
SHROOM1-206ENST00000495680 ISCA1Q9BUE6 129 aa15.74■□□□□ 0.11
SHROOM1-206ENST00000495680 VPS33BQ9H267 617 aa15.74■□□□□ 0.11
SHROOM1-206ENST00000495680 HIRAP54198 1017 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 CIAPIN1Q6FI81 312 aa15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 PLBD2Q8NHP8 589 aa15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 TRPM4Q8TD43 1214 aa15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 CELF1Q92879 486 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 FAM89AQ96GI7 184 aa15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 CAPNS2Q96L46 248 aa15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 GLIS2Q9BZE0 524 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-206ENST00000495680 ANKRD13DQ6ZTN6 518 aa15.72■□□□□ 0.11
SHROOM1-206ENST00000495680 WDR43Q15061 677 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHROOM1-206ENST00000495680 DUSP27Q5VZP5 1158 aa15.71■□□□□ 0.11
SHROOM1-206ENST00000495680 DLK2Q6UY11 383 aa15.71■□□□□ 0.11
SHROOM1-206ENST00000495680 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
SHROOM1-206ENST00000495680 TLL2Q9Y6L7 1015 aa15.71■□□□□ 0.11
SHROOM1-206ENST00000495680 AOC2O75106 756 aa15.7■□□□□ 0.1
SHROOM1-206ENST00000495680 MAP2K1Q02750 393 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-206ENST00000495680 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-206ENST00000495680 GPR101Q96P66 508 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-206ENST00000495680 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
SHROOM1-206ENST00000495680 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-206ENST00000495680 PGAP2Q9UHJ9 254 aa15.7■□□□□ 0.1
SHROOM1-206ENST00000495680 ZBTB12Q9Y330 459 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-206ENST00000495680 CELF2O95319 508 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 HOXB7P09629 217 aa15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 GPSM2P81274 684 aa15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 SAPCD2Q86UD0 394 aa15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 CFAP44Q96MT7 982 aa15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 DBNDD1Q9H9R9 158 aa15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 KCNQ5Q9NR82 932 aa15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 POLLQ9UGP5 575 aa15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 CNOT7Q9UIV1 285 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 TSKSQ9UJT2 592 aa15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 NSFL1CQ9UNZ2 370 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-206ENST00000495680 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
SHROOM1-206ENST00000495680 EGFRP00533 1210 aa15.68■□□□□ 0.1
SHROOM1-206ENST00000495680 TNIP1Q15025 636 aa15.68■□□□□ 0.1
SHROOM1-206ENST00000495680 MICALL2Q8IY33 904 aa15.68■□□□□ 0.1
SHROOM1-206ENST00000495680 ZNF408Q9H9D4 720 aa15.68■□□□□ 0.1
SHROOM1-206ENST00000495680 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
SHROOM1-206ENST00000495680 ELL2O00472 640 aaPredicted RBP15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 PSMD14O00487 310 aa15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 IRS4O14654 1257 aaPredicted RBP15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 ZNF853P0CG23 659 aa15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 ECE1P42892 770 aa15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 SAMD7Q7Z3H4 446 aa15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 TMC4Q7Z404 712 aa15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 PHAXQ9H814 394 aaKnown RBP15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
SHROOM1-206ENST00000495680 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
SHROOM1-206ENST00000495680 SCN9AQ15858 1988 aa15.66■□□□□ 0.1
SHROOM1-206ENST00000495680 DOK7Q18PE1 504 aa15.66■□□□□ 0.1
SHROOM1-206ENST00000495680 WASHC4Q2M389 1173 aa15.66■□□□□ 0.1
SHROOM1-206ENST00000495680 JARID2Q92833 1246 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-206ENST00000495680 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
SHROOM1-206ENST00000495680 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
SHROOM1-206ENST00000495680 APAF1O14727 1248 aa15.65■□□□□ 0.1
SHROOM1-206ENST00000495680 TRIM28Q13263 835 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-206ENST00000495680 TBC1D10BQ4KMP7 808 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-206ENST00000495680 USP48Q86UV5 1035 aa15.65■□□□□ 0.1
SHROOM1-206ENST00000495680 ZC3H15Q8WU90 426 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-206ENST00000495680 ABHD8Q96I13 439 aa15.65■□□□□ 0.1
SHROOM1-206ENST00000495680 PRKRIP1Q9H875 184 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-206ENST00000495680 POLR2AP24928 1970 aaKnown RBP15.64■□□□□ 0.09
SHROOM1-206ENST00000495680 H7C1D1 291 aa15.64■□□□□ 0.09
SHROOM1-206ENST00000495680 ECE2O60344 883 aa15.64■□□□□ 0.09
SHROOM1-206ENST00000495680 CDC37L1Q7L3B6 337 aa15.64■□□□□ 0.09
SHROOM1-206ENST00000495680 RIC3Q7Z5B4 369 aa15.64■□□□□ 0.09
SHROOM1-206ENST00000495680 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
SHROOM1-206ENST00000495680 TBC1D16Q8TBP0 767 aa15.64■□□□□ 0.09
SHROOM1-206ENST00000495680 ZIC5Q96T25 663 aa15.64■□□□□ 0.09
SHROOM1-206ENST00000495680 MAP2K2P36507 400 aa15.63■□□□□ 0.09
SHROOM1-206ENST00000495680 RPS8P62241 208 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms