RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 RAD17O75943 681 aa13.84□□□□□ -0.19
RFTN1-211ENST00000495666 EPS15P42566 896 aa13.84□□□□□ -0.19
RFTN1-211ENST00000495666 CALD1Q05682 793 aaKnown RBP13.84□□□□□ -0.19
RFTN1-211ENST00000495666 FMR1Q06787 632 aaKnown RBP eCLIP13.84□□□□□ -0.19
RFTN1-211ENST00000495666 GPC2Q8N158 579 aa13.84□□□□□ -0.19
RFTN1-211ENST00000495666 MPNDQ8N594 471 aa13.84□□□□□ -0.19
RFTN1-211ENST00000495666 TSPYL6Q8N831 410 aa13.84□□□□□ -0.19
RFTN1-211ENST00000495666 IRS4O14654 1257 aaPredicted RBP13.83□□□□□ -0.2
RFTN1-211ENST00000495666 ANP32CO43423 234 aa13.83□□□□□ -0.2
RFTN1-211ENST00000495666 HSPA1AP0DMV8 641 aaKnown RBP13.83□□□□□ -0.2
RFTN1-211ENST00000495666 HSPA1BP0DMV9 641 aaKnown RBP13.83□□□□□ -0.2
RFTN1-211ENST00000495666 GRAPQ13588 217 aa13.83□□□□□ -0.2
RFTN1-211ENST00000495666 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
RFTN1-211ENST00000495666 GRAPLQ8TC17 118 aaPredicted RBP13.83□□□□□ -0.2
RFTN1-211ENST00000495666 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
RFTN1-211ENST00000495666 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
RFTN1-211ENST00000495666 HOXB7P09629 217 aa13.82□□□□□ -0.2
RFTN1-211ENST00000495666 ZNF853P0CG23 659 aa13.82□□□□□ -0.2
RFTN1-211ENST00000495666 SLC10A5Q5PT55 438 aa13.82□□□□□ -0.2
RFTN1-211ENST00000495666 ISCA1Q9BUE6 129 aa13.82□□□□□ -0.2
RFTN1-211ENST00000495666 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
RFTN1-211ENST00000495666 NSFL1CQ9UNZ2 370 aaKnown RBP13.82□□□□□ -0.2
RFTN1-211ENST00000495666 ADAMTSL1Q8N6G6 1762 aa13.81□□□□□ -0.2
RFTN1-211ENST00000495666 SCNN1DP51172 638 aa13.81□□□□□ -0.2
RFTN1-211ENST00000495666 COL13A1Q5TAT6 717 aaPredicted RBP13.81□□□□□ -0.2
RFTN1-211ENST00000495666 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
RFTN1-211ENST00000495666 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
RFTN1-211ENST00000495666 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
RFTN1-211ENST00000495666 ABT1Q9ULW3 272 aaKnown RBP13.81□□□□□ -0.2
RFTN1-211ENST00000495666 DUOX1Q9NRD9 1551 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
RFTN1-211ENST00000495666 TRAF5O00463 557 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 BBOX1O75936 387 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 GMPSP49915 693 aaPredicted RBP13.8□□□□□ -0.2
RFTN1-211ENST00000495666 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 CCDC30Q5VVM6 783 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 PNMA8AQ86V59 439 aaPredicted RBP13.8□□□□□ -0.2
RFTN1-211ENST00000495666 SP8Q8IXZ3 490 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 JMYQ8N9B5 988 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 ZNF408Q9H9D4 720 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 SEC31BQ9NQW1 1179 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 MAP3K2Q9Y2U5 619 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 LRRC37AA6NMS7 1700 aa13.8□□□□□ -0.2
RFTN1-211ENST00000495666 SHTN1A0MZ66 631 aa13.79□□□□□ -0.2
RFTN1-211ENST00000495666 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
RFTN1-211ENST00000495666 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
RFTN1-211ENST00000495666 GPSM2P81274 684 aa13.79□□□□□ -0.2
RFTN1-211ENST00000495666 CXCL9Q07325 125 aa13.79□□□□□ -0.2
RFTN1-211ENST00000495666 CIAPIN1Q6FI81 312 aa13.79□□□□□ -0.2
RFTN1-211ENST00000495666 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
RFTN1-211ENST00000495666 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
RFTN1-211ENST00000495666 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
RFTN1-211ENST00000495666 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
RFTN1-211ENST00000495666 G3V3G9 751 aa13.78□□□□□ -0.2
RFTN1-211ENST00000495666 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
RFTN1-211ENST00000495666 DCAF8Q5TAQ9 597 aa13.78□□□□□ -0.2
RFTN1-211ENST00000495666 CWC25Q9NXE8 425 aaPredicted RBP13.78□□□□□ -0.2
RFTN1-211ENST00000495666 PI4KAP2A4QPH2 592 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 ITGBL1O95965 494 aaPredicted RBP13.77□□□□□ -0.21
RFTN1-211ENST00000495666 MYH3P11055 1940 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 KIAA2012Q0VF49 1180 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 WASHC4Q2M389 1173 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 CWF19L2Q2TBE0 894 aaKnown RBP13.77□□□□□ -0.21
RFTN1-211ENST00000495666 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
RFTN1-211ENST00000495666 GRIPAP1Q4V328 841 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 RBM26Q5T8P6 1007 aaKnown RBP13.77□□□□□ -0.21
RFTN1-211ENST00000495666 G2E3Q7L622 706 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 WWC1Q8IX03 1113 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 PASKQ96RG2 1323 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.21
RFTN1-211ENST00000495666 TRPM7Q96QT4 1865 aa13.76□□□□□ -0.21
RFTN1-211ENST00000495666 CNTNAP1P78357 1384 aa13.76□□□□□ -0.21
RFTN1-211ENST00000495666 YDJCA8MPS7 323 aa13.76□□□□□ -0.21
RFTN1-211ENST00000495666 UFL1O94874 794 aa13.76□□□□□ -0.21
RFTN1-211ENST00000495666 VEGFBP49765 207 aa13.76□□□□□ -0.21
RFTN1-211ENST00000495666 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
RFTN1-211ENST00000495666 ZBTB38Q8NAP3 1195 aaPredicted RBP13.76□□□□□ -0.21
RFTN1-211ENST00000495666 METTL22Q9BUU2 404 aaPredicted RBP13.76□□□□□ -0.21
RFTN1-211ENST00000495666 GPRC5DQ9NZD1 345 aa13.76□□□□□ -0.21
RFTN1-211ENST00000495666 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
RFTN1-211ENST00000495666 FBXW7Q969H0 707 aa13.75□□□□□ -0.21
RFTN1-211ENST00000495666 RTFDC1Q9BY42 306 aaPredicted RBP13.75□□□□□ -0.21
RFTN1-211ENST00000495666 GLIS2Q9BZE0 524 aaPredicted RBP13.75□□□□□ -0.21
RFTN1-211ENST00000495666 KCNQ5Q9NR82 932 aa13.75□□□□□ -0.21
RFTN1-211ENST00000495666 ADARB2Q9NS39 739 aaKnown RBP13.75□□□□□ -0.21
RFTN1-211ENST00000495666 POLLQ9UGP5 575 aa13.75□□□□□ -0.21
RFTN1-211ENST00000495666 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 PSMD14O00487 310 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 ECE2O60344 883 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 RPS8P62241 208 aaKnown RBP13.74□□□□□ -0.21
RFTN1-211ENST00000495666 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 TNIP1Q15025 636 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 SF3B3Q15393 1217 aaKnown RBP13.74□□□□□ -0.21
RFTN1-211ENST00000495666 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 TBC1D10BQ4KMP7 808 aaPredicted RBP13.74□□□□□ -0.21
RFTN1-211ENST00000495666 DLK2Q6UY11 383 aa13.74□□□□□ -0.21
RFTN1-211ENST00000495666 USP50Q70EL3 339 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms