RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	SUPT20H	Q8NEM7	779 aa		13.19	□□□□□ -0.3
NEPRO-222	ENST00000494891	MYD88	Q99836	296 aa		13.19	□□□□□ -0.3
NEPRO-222	ENST00000494891	TMX4	Q9H1E5	349 aa	Predicted RBP	13.19	□□□□□ -0.3
NEPRO-222	ENST00000494891	MAP3K2	Q9Y2U5	619 aa		13.19	□□□□□ -0.3
NEPRO-222	ENST00000494891	IQCA1L	A6NCM1	817 aa		13.18	□□□□□ -0.3
NEPRO-222	ENST00000494891	IGKV5-2	P06315	115 aa		13.18	□□□□□ -0.3
NEPRO-222	ENST00000494891	EXOSC9	Q06265	439 aa	Known RBP	13.18	□□□□□ -0.3
NEPRO-222	ENST00000494891	FLII	Q13045	1269 aa		13.18	□□□□□ -0.3
NEPRO-222	ENST00000494891	GPC2	Q8N158	579 aa		13.18	□□□□□ -0.3
NEPRO-222	ENST00000494891	SMC1B	Q8NDV3	1235 aa		13.18	□□□□□ -0.3
NEPRO-222	ENST00000494891	JDP2	Q8WYK2	163 aa		13.18	□□□□□ -0.3
NEPRO-222	ENST00000494891	COL4A5	P29400	1685 aa		13.18	□□□□□ -0.3
NEPRO-222	ENST00000494891	PDE8A	O60658	829 aa		13.17	□□□□□ -0.3
NEPRO-222	ENST00000494891	DDN	O94850	711 aa	Predicted RBP	13.17	□□□□□ -0.3
NEPRO-222	ENST00000494891	APLP1	P51693	650 aa		13.17	□□□□□ -0.3
NEPRO-222	ENST00000494891	NEXN	Q0ZGT2	675 aa		13.17	□□□□□ -0.3
NEPRO-222	ENST00000494891	G2E3	Q7L622	706 aa		13.17	□□□□□ -0.3
NEPRO-222	ENST00000494891	TAF1	P21675	1872 aa		13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	LTBP1	Q14766	1721 aa		13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	ZNF541	Q9H0D2	1346 aa		13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	DUOX1	Q9NRD9	1551 aa		13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	NEURL1B	A8MQ27	555 aa		13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	KIAA2012	Q0VF49	1180 aa		13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	MPND	Q8N594	471 aa		13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	SALL2	Q9Y467	1007 aa	Predicted RBP	13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	RTL9	Q8NET4	1388 aa		13.16	□□□□□ -0.3
NEPRO-222	ENST00000494891	MYH3	P11055	1940 aa		13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891		H7C1W4	665 aa		13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	RPS8	P62241	208 aa	Known RBP	13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	CCDC152	Q4G0S7	254 aa		13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	DPP8	Q6V1X1	898 aa	Predicted RBP	13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	LARGE2	Q8N3Y3	721 aa		13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	LINS1	Q8NG48	757 aa		13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	CELF1	Q92879	486 aa	Known RBP	13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	ZNF428	Q96B54	188 aa		13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	PLA2G12B	Q9BX93	195 aa		13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	PODXL2	Q9NZ53	605 aa		13.15	□□□□□ -0.3
NEPRO-222	ENST00000494891	ADAMTSL1	Q8N6G6	1762 aa		13.15	□□□□□ -0.31
NEPRO-222	ENST00000494891		E9PSI1	815 aa		13.14	□□□□□ -0.31
NEPRO-222	ENST00000494891	GCKR	Q14397	625 aa		13.14	□□□□□ -0.31
NEPRO-222	ENST00000494891	SLC51A	Q86UW1	340 aa		13.14	□□□□□ -0.31
NEPRO-222	ENST00000494891	DNAAF4	Q8WXU2	420 aa		13.14	□□□□□ -0.31
NEPRO-222	ENST00000494891	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.14	□□□□□ -0.31
NEPRO-222	ENST00000494891	COL4A1	P02462	1669 aa		13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	TCERG1	O14776	1098 aa	Known RBP	13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	PPIP5K2	O43314	1243 aa		13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	CASP7	P55210	303 aa		13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	EIF6	P56537	245 aa	Known RBP	13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	FKBP5	Q13451	457 aa	Predicted RBP	13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	RTL5	Q5HYW3	569 aa	Predicted RBP	13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	NIM1K	Q8IY84	436 aa		13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	TRMT2A	Q8IZ69	625 aa	Known RBP	13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	HACL1	Q9UJ83	578 aa		13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	ZNRF3	Q9ULT6	936 aa		13.13	□□□□□ -0.31
NEPRO-222	ENST00000494891	CTSW	P56202	376 aa		13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	SLFN5	Q08AF3	891 aa		13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	AOC3	Q16853	763 aa		13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	CWF19L2	Q2TBE0	894 aa	Known RBP	13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	CHADL	Q6NUI6	762 aa		13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	PNMA8A	Q86V59	439 aa	Predicted RBP	13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	LDHD	Q86WU2	507 aa		13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	DNAJC5G	Q8N7S2	189 aa		13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	TTLL11	Q8NHH1	800 aa		13.12	□□□□□ -0.31
NEPRO-222	ENST00000494891	BEND3	Q5T5X7	828 aa		13.11	□□□□□ -0.31
NEPRO-222	ENST00000494891	CSF1R	P07333	972 aa		13.1	□□□□□ -0.31
NEPRO-222	ENST00000494891	EPHX2	P34913	555 aa		13.1	□□□□□ -0.31
NEPRO-222	ENST00000494891	SCNN1D	P51172	638 aa		13.1	□□□□□ -0.31
NEPRO-222	ENST00000494891	CXCL9	Q07325	125 aa		13.1	□□□□□ -0.31
NEPRO-222	ENST00000494891	CDC5L	Q99459	802 aa	Known RBP	13.1	□□□□□ -0.31
NEPRO-222	ENST00000494891	SEC31B	Q9NQW1	1179 aa		13.1	□□□□□ -0.31
NEPRO-222	ENST00000494891	POLL	Q9UGP5	575 aa		13.1	□□□□□ -0.31
NEPRO-222	ENST00000494891	ALDH1L1	O75891	902 aa		13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	CT47B1	P0C2W7	299 aa	Predicted RBP	13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	GPSM2	P81274	684 aa		13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	WASHC4	Q2M389	1173 aa		13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	UBE3B	Q7Z3V4	1068 aa		13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	ANKRD18A	Q8IVF6	992 aa		13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	TBC1D16	Q8TBP0	767 aa		13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	EYA3	Q99504	573 aa		13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	BSDC1	Q9NW68	430 aa	Predicted RBP	13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.09	□□□□□ -0.31
NEPRO-222	ENST00000494891	ZNF609	O15014	1411 aa		13.08	□□□□□ -0.32
NEPRO-222	ENST00000494891	POTEI	P0CG38	1075 aa		13.08	□□□□□ -0.32
NEPRO-222	ENST00000494891	POTEJ	P0CG39	1038 aa		13.08	□□□□□ -0.32
NEPRO-222	ENST00000494891	TNIP1	Q15025	636 aa		13.08	□□□□□ -0.32
NEPRO-222	ENST00000494891	ALDH1L2	Q3SY69	923 aa		13.08	□□□□□ -0.32
NEPRO-222	ENST00000494891	USP50	Q70EL3	339 aa	Predicted RBP	13.08	□□□□□ -0.32
NEPRO-222	ENST00000494891	PTPRC	P08575	1304 aa		13.08	□□□□□ -0.32
NEPRO-222	ENST00000494891	PASK	Q96RG2	1323 aa		13.08	□□□□□ -0.32
NEPRO-222	ENST00000494891	YDJC	A8MPS7	323 aa		13.07	□□□□□ -0.32
NEPRO-222	ENST00000494891	ITGBL1	O95965	494 aa	Predicted RBP	13.07	□□□□□ -0.32
NEPRO-222	ENST00000494891	LMOD1	P29536	600 aa	Predicted RBP	13.07	□□□□□ -0.32
NEPRO-222	ENST00000494891	CIAPIN1	Q6FI81	312 aa		13.07	□□□□□ -0.32
NEPRO-222	ENST00000494891	JARID2	Q92833	1246 aa	Predicted RBP	13.07	□□□□□ -0.32
NEPRO-222	ENST00000494891	GREM2	Q9H772	168 aa		13.07	□□□□□ -0.32
NEPRO-222	ENST00000494891	GPRC5D	Q9NZD1	345 aa		13.07	□□□□□ -0.32
NEPRO-222	ENST00000494891	XDH	P47989	1333 aa		13.07	□□□□□ -0.32
NEPRO-222	ENST00000494891		F6X3S4	739 aa		13.06	□□□□□ -0.32
NEPRO-222	ENST00000494891	BRPF1	P55201	1214 aa	Predicted RBP	13.06	□□□□□ -0.32
NEPRO-222	ENST00000494891	MRPL50	Q8N5N7	158 aa	Known RBP	13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms