RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 ANKRD36CQ5JPF3 1778 aa15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 WDR33Q9C0J8 1336 aaKnown RBP15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 TNIP1Q15025 636 aa15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 PLBD2Q8NHP8 589 aa15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 WBP1LQ9NX94 342 aa15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 GPRC5DQ9NZD1 345 aa15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF3-213ENST00000494764 LAMB2P55268 1798 aa15.17■□□□□ 0.02
RAPGEF3-213ENST00000494764 FMR1Q06787 632 aaKnown RBP eCLIP15.17■□□□□ 0.02
RAPGEF3-213ENST00000494764 CIAPIN1Q6FI81 312 aa15.17■□□□□ 0.02
RAPGEF3-213ENST00000494764 PAXIP1Q6ZW49 1069 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF3-213ENST00000494764 TMC4Q7Z404 712 aa15.17■□□□□ 0.02
RAPGEF3-213ENST00000494764 LTBP1Q14766 1721 aa15.17■□□□□ 0.02
RAPGEF3-213ENST00000494764 TAF1P21675 1872 aa15.16■□□□□ 0.02
RAPGEF3-213ENST00000494764 RAD17O75943 681 aa15.16■□□□□ 0.02
RAPGEF3-213ENST00000494764 HOXB7P09629 217 aa15.16■□□□□ 0.02
RAPGEF3-213ENST00000494764 KIAA2012Q0VF49 1180 aa15.16■□□□□ 0.02
RAPGEF3-213ENST00000494764 FAM89AQ96GI7 184 aa15.16■□□□□ 0.02
RAPGEF3-213ENST00000494764 CFAP44Q96MT7 982 aa15.16■□□□□ 0.02
RAPGEF3-213ENST00000494764 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
RAPGEF3-213ENST00000494764 TRPM7Q96QT4 1865 aa15.15■□□□□ 0.02
RAPGEF3-213ENST00000494764 ATP5J2-PTCD1G3V325 749 aa15.15■□□□□ 0.02
RAPGEF3-213ENST00000494764 TRAF5O00463 557 aa15.15■□□□□ 0.02
RAPGEF3-213ENST00000494764 ECE1P42892 770 aa15.15■□□□□ 0.02
RAPGEF3-213ENST00000494764 GMPSP49915 693 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF3-213ENST00000494764 LBX1P52954 281 aa15.15■□□□□ 0.02
RAPGEF3-213ENST00000494764 GRM1Q13255 1194 aa15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 WASHC4Q2M389 1173 aa15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 RTL5Q5HYW3 569 aaPredicted RBP15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 DUSP27Q5VZP5 1158 aa15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 CST9Q5W186 159 aa15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 CAPNS2Q96L46 248 aa15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 ISCA1Q9BUE6 129 aa15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 BEGAINQ9BUH8 593 aa15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 CNOT7Q9UIV1 285 aaKnown RBP15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 NSFL1CQ9UNZ2 370 aaKnown RBP15.14■□□□□ 0.01
RAPGEF3-213ENST00000494764 H7C1D1 291 aa15.13■□□□□ 0.01
RAPGEF3-213ENST00000494764 SF3B3Q15393 1217 aaKnown RBP15.13■□□□□ 0.01
RAPGEF3-213ENST00000494764 CYP4F22Q6NT55 531 aa15.13■□□□□ 0.01
RAPGEF3-213ENST00000494764 RIC3Q7Z5B4 369 aa15.13■□□□□ 0.01
RAPGEF3-213ENST00000494764 GPR101Q96P66 508 aaPredicted RBP15.13■□□□□ 0.01
RAPGEF3-213ENST00000494764 C6orf229H3BNL8 230 aa15.12■□□□□ 0.01
RAPGEF3-213ENST00000494764 RIMBP2O15034 1052 aa15.12■□□□□ 0.01
RAPGEF3-213ENST00000494764 TRIM28Q13263 835 aaKnown RBP15.12■□□□□ 0.01
RAPGEF3-213ENST00000494764 ZC3H15Q8WU90 426 aaKnown RBP15.12■□□□□ 0.01
RAPGEF3-213ENST00000494764 CELF1Q92879 486 aaKnown RBP15.12■□□□□ 0.01
RAPGEF3-213ENST00000494764 MBIPQ9NS73 344 aa15.12■□□□□ 0.01
RAPGEF3-213ENST00000494764 PGAP2Q9UHJ9 254 aa15.12■□□□□ 0.01
RAPGEF3-213ENST00000494764 TLL2Q9Y6L7 1015 aa15.12■□□□□ 0.01
RAPGEF3-213ENST00000494764 IRS4O14654 1257 aaPredicted RBP15.11■□□□□ 0.01
RAPGEF3-213ENST00000494764 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
RAPGEF3-213ENST00000494764 CDC37L1Q7L3B6 337 aa15.11■□□□□ 0.01
RAPGEF3-213ENST00000494764 GLIS2Q9BZE0 524 aaPredicted RBP15.11■□□□□ 0.01
RAPGEF3-213ENST00000494764 CDHR2Q9BYE9 1310 aa15.11■□□□□ 0.01
RAPGEF3-213ENST00000494764 YDJCA8MPS7 323 aa15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 ELL2O00472 640 aaPredicted RBP15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 HSPA8P11142 646 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 HSP90B1P14625 803 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 HIRAP54198 1017 aaPredicted RBP15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 RPS8P62241 208 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 GNAI1P63096 354 aa15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 GOLGA2Q08379 1002 aa15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 EYA3Q99504 573 aa15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 PRKRIP1Q9H875 184 aaPredicted RBP15.1■□□□□ 0.01
RAPGEF3-213ENST00000494764 DDX60Q8IY21 1712 aaKnown RBP15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 APAF1O14727 1248 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 ZNF853P0CG23 659 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 MAP2K2P36507 400 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 GPSM2P81274 684 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 SAPCD2Q86UD0 394 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 DPF2Q92785 391 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 CHMP4AQ9BY43 222 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 DBNDD1Q9H9R9 158 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 IFT57Q9NWB7 429 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 POLLQ9UGP5 575 aa15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF3-213ENST00000494764 G3V3G9 751 aa15.08■□□□□ 0
RAPGEF3-213ENST00000494764 PSMD14O00487 310 aa15.08■□□□□ 0
RAPGEF3-213ENST00000494764 DCAF8Q5TAQ9 597 aa15.08■□□□□ 0
RAPGEF3-213ENST00000494764 MICALL2Q8IY33 904 aa15.08■□□□□ 0
RAPGEF3-213ENST00000494764 ZBTB38Q8NAP3 1195 aaPredicted RBP15.08■□□□□ 0
RAPGEF3-213ENST00000494764 TRPM4Q8TD43 1214 aa15.08■□□□□ 0
RAPGEF3-213ENST00000494764 MYD88Q99836 296 aa15.08■□□□□ 0
RAPGEF3-213ENST00000494764 ZC3H12CQ9C0D7 883 aaKnown RBP15.08■□□□□ 0
RAPGEF3-213ENST00000494764 POLR2AP24928 1970 aaKnown RBP15.07■□□□□ 0
RAPGEF3-213ENST00000494764 SHTN1A0MZ66 631 aa15.07■□□□□ 0
RAPGEF3-213ENST00000494764 AOC2O75106 756 aa15.07■□□□□ 0
RAPGEF3-213ENST00000494764 DOK7Q18PE1 504 aa15.07■□□□□ 0
RAPGEF3-213ENST00000494764 USP48Q86UV5 1035 aa15.07■□□□□ 0
RAPGEF3-213ENST00000494764 TBC1D16Q8TBP0 767 aa15.07■□□□□ 0
RAPGEF3-213ENST00000494764 ECE2O60344 883 aa15.06■□□□□ 0
RAPGEF3-213ENST00000494764 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
RAPGEF3-213ENST00000494764 TBC1D10BQ4KMP7 808 aaPredicted RBP15.06■□□□□ 0
RAPGEF3-213ENST00000494764 RBM26Q5T8P6 1007 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms