RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 RTFDC1Q9BY42 306 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-208ENST00000494728 ZNF646O15015 1829 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-208ENST00000494728 EPS15P42566 896 aa15.09■□□□□ 0.01
VTI1A-208ENST00000494728 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
VTI1A-208ENST00000494728 SP8Q8IXZ3 490 aa15.09■□□□□ 0.01
VTI1A-208ENST00000494728 EIF6P56537 245 aaKnown RBP15.08■□□□□ 0
VTI1A-208ENST00000494728 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0
VTI1A-208ENST00000494728 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0
VTI1A-208ENST00000494728 GRIPAP1Q4V328 841 aa15.08■□□□□ 0
VTI1A-208ENST00000494728 IFFO2Q5TF58 517 aa15.08■□□□□ 0
VTI1A-208ENST00000494728 MAP1SQ66K74 1059 aaPredicted RBP15.08■□□□□ 0
VTI1A-208ENST00000494728 DPP8Q6V1X1 898 aaPredicted RBP15.08■□□□□ 0
VTI1A-208ENST00000494728 WWC1Q8IX03 1113 aa15.08■□□□□ 0
VTI1A-208ENST00000494728 NIM1KQ8IY84 436 aa15.08■□□□□ 0
VTI1A-208ENST00000494728 JARID2Q92833 1246 aaPredicted RBP15.08■□□□□ 0
VTI1A-208ENST00000494728 MYD88Q99836 296 aa15.08■□□□□ 0
VTI1A-208ENST00000494728 CREBZFQ9NS37 354 aa15.08■□□□□ 0
VTI1A-208ENST00000494728 MKRN1Q9UHC7 482 aaKnown RBP15.08■□□□□ 0
VTI1A-208ENST00000494728 THSD7BQ9C0I4 1608 aa15.07■□□□□ 0
VTI1A-208ENST00000494728 A0A1B0GUL6 1792 aa15.07■□□□□ 0
VTI1A-208ENST00000494728 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
VTI1A-208ENST00000494728 BBOX1O75936 387 aa15.07■□□□□ 0
VTI1A-208ENST00000494728 FMR1Q06787 632 aaKnown RBP eCLIP15.07■□□□□ 0
VTI1A-208ENST00000494728 GOLGA2Q08379 1002 aa15.07■□□□□ 0
VTI1A-208ENST00000494728 SF3B3Q15393 1217 aaKnown RBP15.07■□□□□ 0
VTI1A-208ENST00000494728 RIC3Q7Z5B4 369 aa15.07■□□□□ 0
VTI1A-208ENST00000494728 MPNDQ8N594 471 aa15.07■□□□□ 0
VTI1A-208ENST00000494728 POLR2AP24928 1970 aaKnown RBP15.06■□□□□ 0
VTI1A-208ENST00000494728 YDJCA8MPS7 323 aa15.06■□□□□ 0
VTI1A-208ENST00000494728 CXCL9Q07325 125 aa15.06■□□□□ 0
VTI1A-208ENST00000494728 KIAA2012Q0VF49 1180 aa15.06■□□□□ 0
VTI1A-208ENST00000494728 CCDC27Q2M243 656 aa15.06■□□□□ 0
VTI1A-208ENST00000494728 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
VTI1A-208ENST00000494728 MRS2Q9HD23 443 aa15.06■□□□□ 0
VTI1A-208ENST00000494728 SEC31BQ9NQW1 1179 aa15.06■□□□□ 0
VTI1A-208ENST00000494728 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
VTI1A-208ENST00000494728 CNTNAP1P78357 1384 aa15.06■□□□□ 0
VTI1A-208ENST00000494728 SHTN1A0MZ66 631 aa15.05■□□□□ -0
VTI1A-208ENST00000494728 ZNF316A6NFI3 1004 aaPredicted RBP15.05■□□□□ -0
VTI1A-208ENST00000494728 G2E3Q7L622 706 aa15.05■□□□□ -0
VTI1A-208ENST00000494728 FANCIQ9NVI1 1328 aa15.04■□□□□ -0
VTI1A-208ENST00000494728 RAD17O75943 681 aa15.04■□□□□ -0
VTI1A-208ENST00000494728 IGKV5-2P06315 115 aa15.04■□□□□ -0
VTI1A-208ENST00000494728 HSPA1AP0DMV8 641 aaKnown RBP15.04■□□□□ -0
VTI1A-208ENST00000494728 HSPA1BP0DMV9 641 aaKnown RBP15.04■□□□□ -0
VTI1A-208ENST00000494728 GMPSP49915 693 aaPredicted RBP15.04■□□□□ -0
VTI1A-208ENST00000494728 GPSM2P81274 684 aa15.04■□□□□ -0
VTI1A-208ENST00000494728 COL13A1Q5TAT6 717 aaPredicted RBP15.04■□□□□ -0
VTI1A-208ENST00000494728 PNMA8AQ86V59 439 aaPredicted RBP15.04■□□□□ -0
VTI1A-208ENST00000494728 CNTROBQ8N137 903 aa15.04■□□□□ -0
VTI1A-208ENST00000494728 ZBTB38Q8NAP3 1195 aaPredicted RBP15.04■□□□□ -0
VTI1A-208ENST00000494728 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
VTI1A-208ENST00000494728 GPRC5DQ9NZD1 345 aa15.04■□□□□ -0
VTI1A-208ENST00000494728 ZNRF3Q9ULT6 936 aa15.04■□□□□ -0
VTI1A-208ENST00000494728 MAP3K2Q9Y2U5 619 aa15.04■□□□□ -0
VTI1A-208ENST00000494728 LMOD1P29536 600 aaPredicted RBP15.03■□□□□ -0
VTI1A-208ENST00000494728 ZEB1P37275 1124 aaPredicted RBP15.03■□□□□ -0
VTI1A-208ENST00000494728 CCDC30Q5VVM6 783 aa15.03■□□□□ -0
VTI1A-208ENST00000494728 SUPT20HQ8NEM7 779 aa15.03■□□□□ -0
VTI1A-208ENST00000494728 CCDC85AQ96PX6 553 aaPredicted RBP15.03■□□□□ -0
VTI1A-208ENST00000494728 TMX4Q9H1E5 349 aaPredicted RBP15.03■□□□□ -0
VTI1A-208ENST00000494728 VPS33BQ9H267 617 aa15.03■□□□□ -0
VTI1A-208ENST00000494728 POLLQ9UGP5 575 aa15.03■□□□□ -0
VTI1A-208ENST00000494728 TRAF5O00463 557 aa15.02■□□□□ -0
VTI1A-208ENST00000494728 PCCAP05165 728 aaPredicted RBP15.02■□□□□ -0
VTI1A-208ENST00000494728 TWISTNBQ3B726 338 aaPredicted RBP15.02■□□□□ -0
VTI1A-208ENST00000494728 TMC4Q7Z404 712 aa15.02■□□□□ -0
VTI1A-208ENST00000494728 CCDC191Q8NCU4 936 aa15.02■□□□□ -0
VTI1A-208ENST00000494728 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
VTI1A-208ENST00000494728 CWC25Q9NXE8 425 aaPredicted RBP15.02■□□□□ -0
VTI1A-208ENST00000494728 SALL2Q9Y467 1007 aaPredicted RBP15.02■□□□□ -0
VTI1A-208ENST00000494728 RTL9Q8NET4 1388 aa15.01□□□□□ -0.01
VTI1A-208ENST00000494728 IL16Q14005 1332 aa15.01□□□□□ -0.01
VTI1A-208ENST00000494728 PI4KAP2A4QPH2 592 aa15.01□□□□□ -0.01
VTI1A-208ENST00000494728 TMEM88BA6NKF7 163 aa15.01□□□□□ -0.01
VTI1A-208ENST00000494728 CWF19L2Q2TBE0 894 aaKnown RBP15.01□□□□□ -0.01
VTI1A-208ENST00000494728 CIAPIN1Q6FI81 312 aa15.01□□□□□ -0.01
VTI1A-208ENST00000494728 PI4KAP1Q8N8J0 262 aa15.01□□□□□ -0.01
VTI1A-208ENST00000494728 TRPM4Q8TD43 1214 aa15.01□□□□□ -0.01
VTI1A-208ENST00000494728 DBNDD1Q9H9R9 158 aa15.01□□□□□ -0.01
VTI1A-208ENST00000494728 NSFL1CQ9UNZ2 370 aaKnown RBP15.01□□□□□ -0.01
VTI1A-208ENST00000494728 RIMBP2O15034 1052 aa15□□□□□ -0.01
VTI1A-208ENST00000494728 VEGFBP49765 207 aa15□□□□□ -0.01
VTI1A-208ENST00000494728 KSR2Q6VAB6 950 aa15□□□□□ -0.01
VTI1A-208ENST00000494728 KCNQ5Q9NR82 932 aa15□□□□□ -0.01
VTI1A-208ENST00000494728 CDHR2Q9BYE9 1310 aa14.99□□□□□ -0.01
VTI1A-208ENST00000494728 ANP32CO43423 234 aa14.99□□□□□ -0.01
VTI1A-208ENST00000494728 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
VTI1A-208ENST00000494728 HIRAP54198 1017 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-208ENST00000494728 RPS8P62241 208 aaKnown RBP14.99□□□□□ -0.01
VTI1A-208ENST00000494728 USP50Q70EL3 339 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-208ENST00000494728 TBC1D16Q8TBP0 767 aa14.99□□□□□ -0.01
VTI1A-208ENST00000494728 ADARB2Q9NS39 739 aaKnown RBP14.99□□□□□ -0.01
VTI1A-208ENST00000494728 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-208ENST00000494728 WTIPA6NIX2 430 aaPredicted RBP14.98□□□□□ -0.01
VTI1A-208ENST00000494728 RASSF10A6NK89 507 aa14.98□□□□□ -0.01
VTI1A-208ENST00000494728 NEURL1BA8MQ27 555 aa14.98□□□□□ -0.01
VTI1A-208ENST00000494728 C6orf229H3BNL8 230 aa14.98□□□□□ -0.01
VTI1A-208ENST00000494728 PSMD14O00487 310 aa14.98□□□□□ -0.01
VTI1A-208ENST00000494728 PDE8AO60658 829 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms