RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
ITGB1-217ENST00000494395 NBPF5PQ86XG9 351 aaPredicted RBP11.3□□□□□ -0.6
ITGB1-217ENST00000494395 TRMT2AQ8IZ69 625 aaKnown RBP11.3□□□□□ -0.6
ITGB1-217ENST00000494395 MYH16Q9H6N6 1097 aa11.3□□□□□ -0.6
ITGB1-217ENST00000494395 WWC3Q9ULE0 1092 aa11.3□□□□□ -0.6
ITGB1-217ENST00000494395 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
ITGB1-217ENST00000494395 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
ITGB1-217ENST00000494395 GRIN3BO60391 1043 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 PDE6BP35913 854 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 ST5P78524 1137 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 SLFN5Q08AF3 891 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 PARP10Q53GL7 1025 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
ITGB1-217ENST00000494395 ISCA1Q9BUE6 129 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 CHMP4AQ9BY43 222 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 NYXQ9GZU5 481 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
ITGB1-217ENST00000494395 SBF1O95248 1867 aa11.29□□□□□ -0.6
ITGB1-217ENST00000494395 ADCY9O60503 1353 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 FER1L6Q2WGJ9 1857 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 E9PSI1 815 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 SRGNP10124 158 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 PLCG2P16885 1265 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 G2E3Q7L622 706 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 NLRP10Q86W26 655 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 C2CD5Q86YS7 1000 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 PDZRN3Q9UPQ7 1066 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 BCS1LQ9Y276 419 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
ITGB1-217ENST00000494395 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
ITGB1-217ENST00000494395 FAM177BA6PVY3 158 aa11.27□□□□□ -0.61
ITGB1-217ENST00000494395 H0YIN7 160 aa11.27□□□□□ -0.61
ITGB1-217ENST00000494395 TCERG1O14776 1098 aaKnown RBP11.27□□□□□ -0.61
ITGB1-217ENST00000494395 TRIM28Q13263 835 aaKnown RBP11.27□□□□□ -0.61
ITGB1-217ENST00000494395 CRY2Q49AN0 593 aa11.27□□□□□ -0.61
ITGB1-217ENST00000494395 ERFEQ4G0M1 354 aa11.27□□□□□ -0.61
ITGB1-217ENST00000494395 POTEHQ6S545 545 aa11.27□□□□□ -0.61
ITGB1-217ENST00000494395 NUTM1Q86Y26 1132 aa11.27□□□□□ -0.61
ITGB1-217ENST00000494395 CDCA7LQ96GN5 454 aa11.27□□□□□ -0.61
ITGB1-217ENST00000494395 RNF123Q5XPI4 1314 aa11.27□□□□□ -0.61
ITGB1-217ENST00000494395 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
ITGB1-217ENST00000494395 SLC10A5Q5PT55 438 aa11.26□□□□□ -0.61
ITGB1-217ENST00000494395 STYK1Q6J9G0 422 aa11.26□□□□□ -0.61
ITGB1-217ENST00000494395 PPP1R42Q7Z4L9 355 aa11.26□□□□□ -0.61
ITGB1-217ENST00000494395 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
ITGB1-217ENST00000494395 DCBLD2Q96PD2 775 aa11.26□□□□□ -0.61
ITGB1-217ENST00000494395 TMEM121BQ9BXQ6 578 aaPredicted RBP11.26□□□□□ -0.61
ITGB1-217ENST00000494395 STK31Q9BXU1 1019 aa11.26□□□□□ -0.61
ITGB1-217ENST00000494395 G3V3G9 751 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 NPHP1O15259 732 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 DSG2Q14126 1118 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 KSR2Q6VAB6 950 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 TTLL6Q8N841 843 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 METTL22Q9BUU2 404 aaPredicted RBP11.25□□□□□ -0.61
ITGB1-217ENST00000494395 UTP14AQ9BVJ6 771 aaKnown RBP11.25□□□□□ -0.61
ITGB1-217ENST00000494395 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
ITGB1-217ENST00000494395 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 ATP5J2-PTCD1G3V325 749 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
ITGB1-217ENST00000494395 NPR1P16066 1061 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 YY1P25490 414 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 FLIIQ13045 1269 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 RIC3Q7Z5B4 369 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 MAP3K2Q9Y2U5 619 aa11.24□□□□□ -0.61
ITGB1-217ENST00000494395 TAF1P21675 1872 aa11.23□□□□□ -0.61
ITGB1-217ENST00000494395 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
ITGB1-217ENST00000494395 IGKV5-2P06315 115 aa11.23□□□□□ -0.61
ITGB1-217ENST00000494395 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
ITGB1-217ENST00000494395 HOXA10P31260 410 aaPredicted RBP11.23□□□□□ -0.61
ITGB1-217ENST00000494395 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
ITGB1-217ENST00000494395 CNKSR1Q969H4 720 aa11.23□□□□□ -0.61
ITGB1-217ENST00000494395 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.61
ITGB1-217ENST00000494395 MYD88Q99836 296 aa11.23□□□□□ -0.61
ITGB1-217ENST00000494395 TRMT112Q9UI30 125 aaKnown RBP11.23□□□□□ -0.61
ITGB1-217ENST00000494395 SH3TC1Q8TE82 1336 aa11.23□□□□□ -0.61
ITGB1-217ENST00000494395 COL4A1P02462 1669 aa11.23□□□□□ -0.61
ITGB1-217ENST00000494395 MYH3P11055 1940 aa11.23□□□□□ -0.61
ITGB1-217ENST00000494395 FOXK1P85037 733 aa11.22□□□□□ -0.61
ITGB1-217ENST00000494395 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
ITGB1-217ENST00000494395 LRRC37AA6NMS7 1700 aa11.21□□□□□ -0.61
ITGB1-217ENST00000494395 NFKBIEO00221 500 aa11.21□□□□□ -0.61
ITGB1-217ENST00000494395 SEC24BO95487 1268 aa11.21□□□□□ -0.61
ITGB1-217ENST00000494395 HCLS1P14317 486 aaPredicted RBP11.21□□□□□ -0.61
ITGB1-217ENST00000494395 PRELPP51888 382 aa11.21□□□□□ -0.61
ITGB1-217ENST00000494395 ZBTB38Q8NAP3 1195 aaPredicted RBP11.21□□□□□ -0.61
ITGB1-217ENST00000494395 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
ITGB1-217ENST00000494395 FAM89AQ96GI7 184 aa11.21□□□□□ -0.61
ITGB1-217ENST00000494395 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
ITGB1-217ENST00000494395 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.62
ITGB1-217ENST00000494395 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
ITGB1-217ENST00000494395 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms