RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PTGIRP43119 386 aa7.84□□□□□ -1.15
PTCD3-219ENST00000494323 PTSQ03393 145 aa7.84□□□□□ -1.15
PTCD3-219ENST00000494323 TMEM164Q5U3C3 297 aa7.84□□□□□ -1.15
PTCD3-219ENST00000494323 STK32AQ8WU08 396 aa7.84□□□□□ -1.15
PTCD3-219ENST00000494323 KIAA1024Q9UPX6 916 aa7.84□□□□□ -1.15
PTCD3-219ENST00000494323 NKTRP30414 1462 aaKnown RBP7.83□□□□□ -1.16
PTCD3-219ENST00000494323 CARNS1A5YM72 827 aa7.83□□□□□ -1.16
PTCD3-219ENST00000494323 TMEM88BA6NKF7 163 aa7.83□□□□□ -1.16
PTCD3-219ENST00000494323 DKK1O94907 266 aa7.83□□□□□ -1.16
PTCD3-219ENST00000494323 GNRH1P01148 92 aa7.83□□□□□ -1.16
PTCD3-219ENST00000494323 VSIG8P0DPA2 414 aa7.83□□□□□ -1.16
PTCD3-219ENST00000494323 SEC13P55735 322 aa7.83□□□□□ -1.16
PTCD3-219ENST00000494323 ZNF772Q68DY9 489 aaPredicted RBP7.83□□□□□ -1.16
PTCD3-219ENST00000494323 AEBP1Q8IUX7 1158 aa7.83□□□□□ -1.16
PTCD3-219ENST00000494323 NUP155O75694 1391 aa7.83□□□□□ -1.16
PTCD3-219ENST00000494323 SPATA31A6Q5VVP1 1343 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 ADGRL2O95490 1459 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 RXRBP28702 533 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 SWI5Q1ZZU3 235 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 ZNF326Q5BKZ1 582 aaKnown RBP7.82□□□□□ -1.16
PTCD3-219ENST00000494323 BRINP3Q76B58 766 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 ADAMTS13Q76LX8 1427 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 RNF217Q8TC41 542 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 DDX17Q92841 729 aaKnown RBP7.82□□□□□ -1.16
PTCD3-219ENST00000494323 STK17AQ9UEE5 414 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 GCC2Q8IWJ2 1684 aa7.82□□□□□ -1.16
PTCD3-219ENST00000494323 TMEM131LA2VDJ0 1609 aa7.81□□□□□ -1.16
PTCD3-219ENST00000494323 RPRD2Q5VT52 1461 aaKnown RBP7.81□□□□□ -1.16
PTCD3-219ENST00000494323 SETD1AO15047 1707 aaKnown RBP7.81□□□□□ -1.16
PTCD3-219ENST00000494323 NWD1Q149M9 1564 aa7.81□□□□□ -1.16
PTCD3-219ENST00000494323 M0R2N6 131 aa7.81□□□□□ -1.16
PTCD3-219ENST00000494323 WASLO00401 505 aaPredicted RBP7.81□□□□□ -1.16
PTCD3-219ENST00000494323 ESCO1Q5FWF5 840 aa7.81□□□□□ -1.16
PTCD3-219ENST00000494323 KDF1Q8NAX2 398 aaPredicted RBP7.81□□□□□ -1.16
PTCD3-219ENST00000494323 LRP6O75581 1613 aa7.81□□□□□ -1.16
PTCD3-219ENST00000494323 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.81□□□□□ -1.16
PTCD3-219ENST00000494323 PTPRUQ92729 1446 aa7.8□□□□□ -1.16
PTCD3-219ENST00000494323 NCOA3Q9Y6Q9 1424 aa7.8□□□□□ -1.16
PTCD3-219ENST00000494323 BACH1O14867 736 aa7.8□□□□□ -1.16
PTCD3-219ENST00000494323 GDF10P55107 478 aa7.8□□□□□ -1.16
PTCD3-219ENST00000494323 FOXD4L5Q5VV16 416 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-219ENST00000494323 B4GALNT3Q6L9W6 998 aa7.8□□□□□ -1.16
PTCD3-219ENST00000494323 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
PTCD3-219ENST00000494323 COL16A1Q07092 1604 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-219ENST00000494323 SFI1A8K8P3 1242 aa7.79□□□□□ -1.16
PTCD3-219ENST00000494323 BRD1O95696 1058 aa7.79□□□□□ -1.16
PTCD3-219ENST00000494323 INHAP05111 366 aa7.79□□□□□ -1.16
PTCD3-219ENST00000494323 SCNN1DP51172 638 aa7.79□□□□□ -1.16
PTCD3-219ENST00000494323 CLP1Q92989 425 aaKnown RBP7.79□□□□□ -1.16
PTCD3-219ENST00000494323 LRRC59Q96AG4 307 aaKnown RBP7.79□□□□□ -1.16
PTCD3-219ENST00000494323 QTRT2Q9H974 415 aaKnown RBP7.79□□□□□ -1.16
PTCD3-219ENST00000494323 ZNF358Q9NW07 568 aa7.79□□□□□ -1.16
PTCD3-219ENST00000494323 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
PTCD3-219ENST00000494323 E9PCH4 1651 aa7.79□□□□□ -1.16
PTCD3-219ENST00000494323 AFF2P51816 1311 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 SLC35F4A4IF30 521 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 FAM181BA6NEQ2 426 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 TMEM229AB2RXF0 380 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 MEN1O00255 615 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 ZSCAN1Q8NBB4 408 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTCD3-219ENST00000494323 C8orf37Q96NL8 207 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 ETNK1Q9HBU6 452 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 METP08581 1390 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 PIK3R4Q99570 1358 aa7.78□□□□□ -1.16
PTCD3-219ENST00000494323 ADAMTS2O95450 1211 aa7.77□□□□□ -1.17
PTCD3-219ENST00000494323 NGLY1Q96IV0 654 aa7.77□□□□□ -1.17
PTCD3-219ENST00000494323 ARHGEF10LQ9HCE6 1279 aa7.77□□□□□ -1.17
PTCD3-219ENST00000494323 ROCK1Q13464 1354 aa7.76□□□□□ -1.17
PTCD3-219ENST00000494323 PATL2C9JE40 543 aaKnown RBP7.76□□□□□ -1.17
PTCD3-219ENST00000494323 RNF144AP50876 292 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-219ENST00000494323 KCNA1Q09470 495 aa7.76□□□□□ -1.17
PTCD3-219ENST00000494323 CLN3Q13286 438 aa7.76□□□□□ -1.17
PTCD3-219ENST00000494323 XAGE2Q96GT9 111 aa7.76□□□□□ -1.17
PTCD3-219ENST00000494323 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
PTCD3-219ENST00000494323 ORAI2Q96SN7 254 aa7.76□□□□□ -1.17
PTCD3-219ENST00000494323 HINFPQ9BQA5 517 aa7.76□□□□□ -1.17
PTCD3-219ENST00000494323 TRPM2O94759 1503 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 A0A1W2PRU2 124 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 CDC14CA4D256 554 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 ITGA6P23229 1130 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 GPC1P35052 558 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 RBM6P78332 1123 aaKnown RBP7.75□□□□□ -1.17
PTCD3-219ENST00000494323 PRICKLE2Q7Z3G6 844 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 TSEN2Q8NCE0 465 aaKnown RBP7.75□□□□□ -1.17
PTCD3-219ENST00000494323 NANOS1Q8WY41 292 aaKnown RBP7.75□□□□□ -1.17
PTCD3-219ENST00000494323 NLRP3Q96P20 1036 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 RAB6BQ9NRW1 208 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 UNC13BO14795 1591 aa7.75□□□□□ -1.17
PTCD3-219ENST00000494323 AHDC1Q5TGY3 1603 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-219ENST00000494323 STAU1O95793 577 aaKnown RBP7.74□□□□□ -1.17
PTCD3-219ENST00000494323 IL2RAP01589 272 aa7.74□□□□□ -1.17
PTCD3-219ENST00000494323 ATP2B4P23634 1241 aa7.74□□□□□ -1.17
PTCD3-219ENST00000494323 CNKSR1Q969H4 720 aa7.74□□□□□ -1.17
PTCD3-219ENST00000494323 GZF1Q9H116 711 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-219ENST00000494323 SERTAD1Q9UHV2 236 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms