RNA–Protein interactions for RNA: ENST00000494317.1

LCN2-207, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 625 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-207ENST00000494317 VPS33BQ9H267 617 aa29.54■■■□□ 2.32
LCN2-207ENST00000494317 ANP32CO43423 234 aa29.53■■■□□ 2.32
LCN2-207ENST00000494317 SF3B3Q15393 1217 aaKnown RBP29.53■■■□□ 2.32
LCN2-207ENST00000494317 CCDC30Q5VVM6 783 aa29.53■■■□□ 2.32
LCN2-207ENST00000494317 PNMA8AQ86V59 439 aaPredicted RBP29.53■■■□□ 2.32
LCN2-207ENST00000494317 WWC1Q8IX03 1113 aa29.53■■■□□ 2.32
LCN2-207ENST00000494317 CLEC11AQ9Y240 323 aa29.53■■■□□ 2.32
LCN2-207ENST00000494317 TAF1P21675 1872 aa29.53■■■□□ 2.32
LCN2-207ENST00000494317 MYD88Q99836 296 aa29.52■■■□□ 2.32
LCN2-207ENST00000494317 ADAMTSL1Q8N6G6 1762 aa29.52■■■□□ 2.32
LCN2-207ENST00000494317 PASKQ96RG2 1323 aa29.51■■■□□ 2.32
LCN2-207ENST00000494317 IRS4O14654 1257 aaPredicted RBP29.51■■■□□ 2.31
LCN2-207ENST00000494317 TMC4Q7Z404 712 aa29.51■■■□□ 2.31
LCN2-207ENST00000494317 CHMP4AQ9BY43 222 aa29.51■■■□□ 2.31
LCN2-207ENST00000494317 LMOD1P29536 600 aaPredicted RBP29.5■■■□□ 2.31
LCN2-207ENST00000494317 SCNN1DP51172 638 aa29.5■■■□□ 2.31
LCN2-207ENST00000494317 CELF1Q92879 486 aaKnown RBP29.5■■■□□ 2.31
LCN2-207ENST00000494317 CREBZFQ9NS37 354 aa29.5■■■□□ 2.31
LCN2-207ENST00000494317 LTBP1Q14766 1721 aa29.5■■■□□ 2.31
LCN2-207ENST00000494317 ITGBL1O95965 494 aaPredicted RBP29.49■■■□□ 2.31
LCN2-207ENST00000494317 ZBTB38Q8NAP3 1195 aaPredicted RBP29.49■■■□□ 2.31
LCN2-207ENST00000494317 ZNRF3Q9ULT6 936 aa29.49■■■□□ 2.31
LCN2-207ENST00000494317 KIAA2012Q0VF49 1180 aa29.48■■■□□ 2.31
LCN2-207ENST00000494317 LRRC37AA6NMS7 1700 aa29.48■■■□□ 2.31
LCN2-207ENST00000494317 DDX58O95786 925 aaKnown RBP29.47■■■□□ 2.31
LCN2-207ENST00000494317 DUOX1Q9NRD9 1551 aa29.47■■■□□ 2.31
LCN2-207ENST00000494317 COL4A1P02462 1669 aa29.47■■■□□ 2.31
LCN2-207ENST00000494317 EPS15P42566 896 aa29.46■■■□□ 2.31
LCN2-207ENST00000494317 CXCL9Q07325 125 aa29.46■■■□□ 2.31
LCN2-207ENST00000494317 MAP1SQ66K74 1059 aaPredicted RBP29.46■■■□□ 2.31
LCN2-207ENST00000494317 CCDC191Q8NCU4 936 aa29.46■■■□□ 2.31
LCN2-207ENST00000494317 METTL22Q9BUU2 404 aaPredicted RBP29.46■■■□□ 2.31
LCN2-207ENST00000494317 IL16Q14005 1332 aa29.45■■■□□ 2.31
LCN2-207ENST00000494317 NCBP3Q53F19 620 aaKnown RBP29.45■■■□□ 2.31
LCN2-207ENST00000494317 TWISTNBQ3B726 338 aaPredicted RBP29.44■■■□□ 2.3
LCN2-207ENST00000494317 IFFO2Q5TF58 517 aa29.44■■■□□ 2.3
LCN2-207ENST00000494317 CNTROBQ8N137 903 aa29.44■■■□□ 2.3
LCN2-207ENST00000494317 CWC25Q9NXE8 425 aaPredicted RBP29.44■■■□□ 2.3
LCN2-207ENST00000494317 MAP3K2Q9Y2U5 619 aa29.44■■■□□ 2.3
LCN2-207ENST00000494317 PCCAP05165 728 aaPredicted RBP29.43■■■□□ 2.3
LCN2-207ENST00000494317 HSP90B1P14625 803 aaKnown RBP29.43■■■□□ 2.3
LCN2-207ENST00000494317 JARID2Q92833 1246 aaPredicted RBP29.43■■■□□ 2.3
LCN2-207ENST00000494317 STK31Q9BXU1 1019 aa29.43■■■□□ 2.3
LCN2-207ENST00000494317 MKRN1Q9UHC7 482 aaKnown RBP29.43■■■□□ 2.3
LCN2-207ENST00000494317 NSFL1CQ9UNZ2 370 aaKnown RBP29.43■■■□□ 2.3
LCN2-207ENST00000494317 KSR2Q6VAB6 950 aa29.42■■■□□ 2.3
LCN2-207ENST00000494317 PI4KAP2A4QPH2 592 aa29.41■■■□□ 2.3
LCN2-207ENST00000494317 RPS8P62241 208 aaKnown RBP29.41■■■□□ 2.3
LCN2-207ENST00000494317 CIAPIN1Q6FI81 312 aa29.41■■■□□ 2.3
LCN2-207ENST00000494317 PI4KAP1Q8N8J0 262 aa29.41■■■□□ 2.3
LCN2-207ENST00000494317 TMEM88BA6NKF7 163 aa29.4■■■□□ 2.3
LCN2-207ENST00000494317 GPSM2P81274 684 aa29.4■■■□□ 2.3
LCN2-207ENST00000494317 SEC31BQ9NQW1 1179 aa29.4■■■□□ 2.3
LCN2-207ENST00000494317 GPRC5DQ9NZD1 345 aa29.4■■■□□ 2.3
LCN2-207ENST00000494317 SALL2Q9Y467 1007 aaPredicted RBP29.4■■■□□ 2.3
LCN2-207ENST00000494317 RAD17O75943 681 aa29.39■■■□□ 2.3
LCN2-207ENST00000494317 GMPSP49915 693 aaPredicted RBP29.39■■■□□ 2.3
LCN2-207ENST00000494317 USP50Q70EL3 339 aaPredicted RBP29.39■■■□□ 2.3
LCN2-207ENST00000494317 PCNTO95613 3336 aa29.39■■■□□ 2.3
LCN2-207ENST00000494317 FANCIQ9NVI1 1328 aa29.39■■■□□ 2.3
LCN2-207ENST00000494317 YDJCA8MPS7 323 aa29.38■■■□□ 2.29
LCN2-207ENST00000494317 PDE8AO60658 829 aa29.38■■■□□ 2.29
LCN2-207ENST00000494317 IGKV5-2P06315 115 aa29.38■■■□□ 2.29
LCN2-207ENST00000494317 WASHC4Q2M389 1173 aa29.38■■■□□ 2.29
LCN2-207ENST00000494317 G2E3Q7L622 706 aa29.38■■■□□ 2.29
LCN2-207ENST00000494317 CNTNAP1P78357 1384 aa29.38■■■□□ 2.29
LCN2-207ENST00000494317 C6orf229H3BNL8 230 aa29.37■■■□□ 2.29
LCN2-207ENST00000494317 TNIP1Q15025 636 aa29.37■■■□□ 2.29
LCN2-207ENST00000494317 CCDC152Q4G0S7 254 aa29.37■■■□□ 2.29
LCN2-207ENST00000494317 ADARB2Q9NS39 739 aaKnown RBP29.37■■■□□ 2.29
LCN2-207ENST00000494317 POLLQ9UGP5 575 aa29.37■■■□□ 2.29
LCN2-207ENST00000494317 SLC4A2P04920 1241 aa29.36■■■□□ 2.29
LCN2-207ENST00000494317 CCDC85AQ96PX6 553 aaPredicted RBP29.36■■■□□ 2.29
LCN2-207ENST00000494317 RIMBP2O15034 1052 aa29.35■■■□□ 2.29
LCN2-207ENST00000494317 HSPA1AP0DMV8 641 aaKnown RBP29.35■■■□□ 2.29
LCN2-207ENST00000494317 HSPA1BP0DMV9 641 aaKnown RBP29.35■■■□□ 2.29
LCN2-207ENST00000494317 NEXNQ0ZGT2 675 aa29.35■■■□□ 2.29
LCN2-207ENST00000494317 WDR63Q8IWG1 891 aa29.35■■■□□ 2.29
LCN2-207ENST00000494317 BCL2L13Q9BXK5 485 aa29.35■■■□□ 2.29
LCN2-207ENST00000494317 CDHR2Q9BYE9 1310 aa29.35■■■□□ 2.29
LCN2-207ENST00000494317 TBC1D16Q8TBP0 767 aa29.34■■■□□ 2.29
LCN2-207ENST00000494317 DBNDD1Q9H9R9 158 aa29.34■■■□□ 2.29
LCN2-207ENST00000494317 CWF19L2Q2TBE0 894 aaKnown RBP29.33■■■□□ 2.29
LCN2-207ENST00000494317 GPR101Q96P66 508 aaPredicted RBP29.33■■■□□ 2.29
LCN2-207ENST00000494317 EYA3Q99504 573 aa29.32■■■□□ 2.28
LCN2-207ENST00000494317 NEURL1BA8MQ27 555 aa29.31■■■□□ 2.28
LCN2-207ENST00000494317 FMR1Q06787 632 aaKnown RBP eCLIP29.31■■■□□ 2.28
LCN2-207ENST00000494317 FLIIQ13045 1269 aa29.31■■■□□ 2.28
LCN2-207ENST00000494317 PODXL2Q9NZ53 605 aa29.31■■■□□ 2.28
LCN2-207ENST00000494317 CTSWP56202 376 aa29.3■■■□□ 2.28
LCN2-207ENST00000494317 FAM9BQ8IZU0 186 aa29.3■■■□□ 2.28
LCN2-207ENST00000494317 ECE2O60344 883 aa29.29■■■□□ 2.28
LCN2-207ENST00000494317 VAMP4O75379 141 aa29.29■■■□□ 2.28
LCN2-207ENST00000494317 VEGFBP49765 207 aa29.29■■■□□ 2.28
LCN2-207ENST00000494317 EXOSC9Q06265 439 aaKnown RBP29.29■■■□□ 2.28
LCN2-207ENST00000494317 DOK7Q18PE1 504 aa29.29■■■□□ 2.28
LCN2-207ENST00000494317 COL13A1Q5TAT6 717 aaPredicted RBP29.29■■■□□ 2.28
LCN2-207ENST00000494317 ANKIB1Q9P2G1 1089 aa29.29■■■□□ 2.28
LCN2-207ENST00000494317 SHTN1A0MZ66 631 aa29.28■■■□□ 2.28
LCN2-207ENST00000494317 TRAF5O00463 557 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms