RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 TFCP2Q12800 502 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 DNMT1P26358 1616 aaKnown RBP13.54□□□□□ -0.24
COL25A1-204ENST00000494183 A1BGP04217 495 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 IDEP14735 1019 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 TIMM10P62072 90 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
COL25A1-204ENST00000494183 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
COL25A1-204ENST00000494183 ESPNB1AK53 854 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 GNPATO15228 680 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 OGFOD1Q8N543 542 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 CCDC112Q8NEF3 446 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 NYXQ9GZU5 481 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 ZBTB7BO15156 539 aaPredicted RBP13.53□□□□□ -0.24
COL25A1-204ENST00000494183 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
COL25A1-204ENST00000494183 RDXP35241 583 aaKnown RBP13.53□□□□□ -0.24
COL25A1-204ENST00000494183 UBA7P41226 1012 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 GSTO1P78417 241 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
COL25A1-204ENST00000494183 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 CCDC12Q8WUD4 166 aaPredicted RBP13.53□□□□□ -0.24
COL25A1-204ENST00000494183 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
COL25A1-204ENST00000494183 ZGPATQ8N5A5 531 aaKnown RBP13.52□□□□□ -0.24
COL25A1-204ENST00000494183 TCP11L1Q9NUJ3 509 aa13.52□□□□□ -0.24
COL25A1-204ENST00000494183 CFAP43Q8NDM7 1665 aa13.52□□□□□ -0.24
COL25A1-204ENST00000494183 ADGRL2O95490 1459 aa13.52□□□□□ -0.24
COL25A1-204ENST00000494183 EPB41L2O43491 1005 aaKnown RBP13.52□□□□□ -0.24
COL25A1-204ENST00000494183 MYO1BO43795 1136 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.25
COL25A1-204ENST00000494183 TSPY3P0CV98 308 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 TSPY8P0CW00 308 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 SFPQP23246 707 aaKnown RBP eCLIP13.52□□□□□ -0.25
COL25A1-204ENST00000494183 PRIM1P49642 420 aaKnown RBP13.52□□□□□ -0.25
COL25A1-204ENST00000494183 MIGA1Q8NAN2 632 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 KRT23Q9C075 422 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 WDHD1O75717 1129 aaPredicted RBP13.52□□□□□ -0.25
COL25A1-204ENST00000494183 CCDC181Q5TID7 509 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 PLEKHM2Q8IWE5 1019 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 JAG2Q9Y219 1238 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 TTC41PQ6P2S7 1318 aa13.52□□□□□ -0.25
COL25A1-204ENST00000494183 HCLS1P14317 486 aaPredicted RBP13.51□□□□□ -0.25
COL25A1-204ENST00000494183 PICALMQ13492 652 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 ARHGAP29Q52LW3 1261 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 DDX19AQ9NUU7 478 aaKnown RBP13.51□□□□□ -0.25
COL25A1-204ENST00000494183 NPC1L1Q9UHC9 1359 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 ANAPC15P60006 121 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 ERCC4Q92889 916 aaPredicted RBP13.51□□□□□ -0.25
COL25A1-204ENST00000494183 PATL2C9JE40 543 aaKnown RBP13.51□□□□□ -0.25
COL25A1-204ENST00000494183 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
COL25A1-204ENST00000494183 CHST3Q7LGC8 479 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 TMTC2Q8N394 836 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 ZNF496Q96IT1 587 aaPredicted RBP13.51□□□□□ -0.25
COL25A1-204ENST00000494183 CTAGE5O15320 804 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 Q6ZUG5 572 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 MYO6Q9UM54 1294 aa13.51□□□□□ -0.25
COL25A1-204ENST00000494183 SBNO2Q9Y2G9 1366 aa13.5□□□□□ -0.25
COL25A1-204ENST00000494183 NBPF7P0C2Y1 421 aaPredicted RBP13.5□□□□□ -0.25
COL25A1-204ENST00000494183 ISM2Q6H9L7 571 aa13.5□□□□□ -0.25
COL25A1-204ENST00000494183 PAXIP1Q6ZW49 1069 aaPredicted RBP13.5□□□□□ -0.25
COL25A1-204ENST00000494183 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
COL25A1-204ENST00000494183 USP25Q9UHP3 1055 aa13.5□□□□□ -0.25
COL25A1-204ENST00000494183 SH3TC1Q8TE82 1336 aa13.5□□□□□ -0.25
COL25A1-204ENST00000494183 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
COL25A1-204ENST00000494183 TRAPPC3LQ5T215 181 aa13.5□□□□□ -0.25
COL25A1-204ENST00000494183 PLBD2Q8NHP8 589 aa13.5□□□□□ -0.25
COL25A1-204ENST00000494183 ALG1Q9BT22 464 aa13.5□□□□□ -0.25
COL25A1-204ENST00000494183 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
COL25A1-204ENST00000494183 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 SCLT1Q96NL6 688 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 ZNF804AQ7Z570 1209 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 TXLNBQ8N3L3 684 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 SLC52A2Q9HAB3 445 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
COL25A1-204ENST00000494183 RNF113AO15541 343 aaKnown RBP13.49□□□□□ -0.25
COL25A1-204ENST00000494183 RTN1Q16799 776 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
COL25A1-204ENST00000494183 PTPRTO14522 1441 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 YEATS2Q9ULM3 1422 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 RIMBP2O15034 1052 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 PRC1O43663 620 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 KIAA1328Q86T90 577 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
COL25A1-204ENST00000494183 BABAM1Q9NWV8 329 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 MCM9Q9NXL9 1143 aa13.49□□□□□ -0.25
COL25A1-204ENST00000494183 MAGEB6P1A0A0J9YX57 407 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 HOXB7P09629 217 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 ZNF165P49910 485 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 C8orf34Q49A92 452 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
COL25A1-204ENST00000494183 PARP3Q9Y6F1 533 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 ZSCAN22P10073 491 aaPredicted RBP13.48□□□□□ -0.25
COL25A1-204ENST00000494183 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
COL25A1-204ENST00000494183 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 EYA2O00167 538 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms