RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ARHGEF12Q9NZN5 1544 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 SHTN1A0MZ66 631 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 LUZP1Q86V48 1076 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 POLKQ9UBT6 870 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 SYCP2Q9BX26 1530 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 VAMP4O75379 141 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 RLBP1P12271 317 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 CEP135Q66GS9 1140 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 ZBTB40Q9NUA8 1239 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 RAB3GAP1Q15042 981 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 SLC26A6Q9BXS9 759 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 CCDC171Q6TFL3 1326 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 TNRQ92752 1358 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 F13A1P00488 732 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 WDR78Q5VTH9 848 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 FAM200AQ8TCP9 573 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 RFC4P35249 363 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 CCDC144CPQ8IYA2 1237 aa21.99■■□□□ 1.11
COL27A1-207ENST00000494090 C16orf71Q8IYS4 520 aaPredicted RBP21.99■■□□□ 1.11
COL27A1-207ENST00000494090 EIF4A2Q14240 407 aaKnown RBP21.98■■□□□ 1.11
COL27A1-207ENST00000494090 TMTC2Q8N394 836 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 KCNG4Q8TDN1 519 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 MYO1BO43795 1136 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 UBA7P41226 1012 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 MTIF2P46199 727 aaKnown RBP21.98■■□□□ 1.11
COL27A1-207ENST00000494090 KSR2Q6VAB6 950 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 TTC41PQ6P2S7 1318 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 KLF18A0A0U1RQI7 1052 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 CEBPAP49715 358 aaPredicted RBP21.98■■□□□ 1.11
COL27A1-207ENST00000494090 MCMDC2Q4G0Z9 681 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 INCENPQ9NQS7 918 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 GRM8O00222 908 aa21.98■■□□□ 1.11
COL27A1-207ENST00000494090 NBPF7P0C2Y1 421 aaPredicted RBP21.98■■□□□ 1.11
COL27A1-207ENST00000494090 TDRD12Q587J7 1177 aaKnown RBP21.98■■□□□ 1.11
COL27A1-207ENST00000494090 CEP85Q6P2H3 762 aa21.97■■□□□ 1.11
COL27A1-207ENST00000494090 TNNQ9UQP3 1299 aa21.97■■□□□ 1.11
COL27A1-207ENST00000494090 SYKP43405 635 aa21.97■■□□□ 1.11
COL27A1-207ENST00000494090 MSH6P52701 1360 aa21.97■■□□□ 1.11
COL27A1-207ENST00000494090 PRKCSHP14314 528 aaPredicted RBP21.97■■□□□ 1.11
COL27A1-207ENST00000494090 RBM25P49756 843 aaKnown RBP21.97■■□□□ 1.11
COL27A1-207ENST00000494090 KRT23Q9C075 422 aa21.97■■□□□ 1.11
COL27A1-207ENST00000494090 ALS2CR12Q96Q35 445 aa21.97■■□□□ 1.11
COL27A1-207ENST00000494090 TAOK3Q9H2K8 898 aa21.97■■□□□ 1.11
COL27A1-207ENST00000494090 A2MP01023 1474 aa21.96■■□□□ 1.11
COL27A1-207ENST00000494090 HOOK3Q86VS8 718 aa21.96■■□□□ 1.11
COL27A1-207ENST00000494090 NAA15Q9BXJ9 866 aaKnown RBP21.96■■□□□ 1.11
COL27A1-207ENST00000494090 CCDC40Q4G0X9 1142 aa21.96■■□□□ 1.11
COL27A1-207ENST00000494090 SMARCC1Q92922 1105 aaPredicted RBP21.96■■□□□ 1.11
COL27A1-207ENST00000494090 ANO6Q4KMQ2 910 aa21.96■■□□□ 1.11
COL27A1-207ENST00000494090 AKAP4Q5JQC9 854 aa21.96■■□□□ 1.11
COL27A1-207ENST00000494090 ZFYVE9O95405 1425 aa21.95■■□□□ 1.11
COL27A1-207ENST00000494090 PANK2Q9BZ23 570 aa21.95■■□□□ 1.11
COL27A1-207ENST00000494090 XAGE3Q8WTP9 111 aa21.95■■□□□ 1.1
COL27A1-207ENST00000494090 DYDC1Q8WWB3 177 aa21.95■■□□□ 1.1
COL27A1-207ENST00000494090 GSTTP1A0A1W2PQM5 241 aa21.95■■□□□ 1.1
COL27A1-207ENST00000494090 CNNM2Q9H8M5 875 aa21.95■■□□□ 1.1
COL27A1-207ENST00000494090 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
COL27A1-207ENST00000494090 NBPF6Q5VWK0 638 aa21.95■■□□□ 1.1
COL27A1-207ENST00000494090 NBPF5PQ86XG9 351 aaPredicted RBP21.95■■□□□ 1.1
COL27A1-207ENST00000494090 ERMNQ8TAM6 284 aa21.95■■□□□ 1.1
COL27A1-207ENST00000494090 MRPS27Q92552 414 aaKnown RBP21.95■■□□□ 1.1
COL27A1-207ENST00000494090 NBPF4Q96M43 638 aa21.95■■□□□ 1.1
COL27A1-207ENST00000494090 RMND1Q9NWS8 449 aa21.94■■□□□ 1.1
COL27A1-207ENST00000494090 GCOM1H8Y6P7 765 aaPredicted RBP21.94■■□□□ 1.1
COL27A1-207ENST00000494090 MYZAPP0CAP1 466 aa21.94■■□□□ 1.1
COL27A1-207ENST00000494090 GNAQP50148 359 aa21.94■■□□□ 1.1
COL27A1-207ENST00000494090 NOLC1Q14978 699 aaKnown RBP eCLIP21.94■■□□□ 1.1
COL27A1-207ENST00000494090 PRDM10Q9NQV6 1147 aa21.94■■□□□ 1.1
COL27A1-207ENST00000494090 RAB11FIP4Q86YS3 637 aa21.94■■□□□ 1.1
COL27A1-207ENST00000494090 JARID2Q92833 1246 aaPredicted RBP21.94■■□□□ 1.1
COL27A1-207ENST00000494090 NPHP3Q7Z494 1330 aa21.94■■□□□ 1.1
COL27A1-207ENST00000494090 CTTNBP2Q8WZ74 1663 aa21.94■■□□□ 1.1
COL27A1-207ENST00000494090 IBSPP21815 317 aaPredicted RBP21.94■■□□□ 1.1
COL27A1-207ENST00000494090 ISM2Q6H9L7 571 aa21.94■■□□□ 1.1
COL27A1-207ENST00000494090 Q6ZUG5 572 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 ZBTB43O43298 467 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 IDEP14735 1019 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 PLEKHM2Q8IWE5 1019 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 WTAPQ15007 396 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 COPS6Q7L5N1 327 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 TMX1Q9H3N1 280 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 BMS1Q14692 1282 aaKnown RBP21.93■■□□□ 1.1
COL27A1-207ENST00000494090 TSPYL6Q8N831 410 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 INTS4Q96HW7 963 aaKnown RBP21.93■■□□□ 1.1
COL27A1-207ENST00000494090 CARD14Q9BXL6 1004 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 PER1O15534 1290 aaPredicted RBP21.93■■□□□ 1.1
COL27A1-207ENST00000494090 CCDC172P0C7W6 258 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 IL15P40933 162 aaPredicted RBP21.93■■□□□ 1.1
COL27A1-207ENST00000494090 DACT1Q9NYF0 836 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
COL27A1-207ENST00000494090 PPFIA3O75145 1194 aa21.92■■□□□ 1.1
COL27A1-207ENST00000494090 UBASH3AP57075 661 aa21.92■■□□□ 1.1
COL27A1-207ENST00000494090 MTHFSDQ2M296 383 aaKnown RBP21.92■■□□□ 1.1
COL27A1-207ENST00000494090 ZCRB1Q8TBF4 217 aaKnown RBP21.92■■□□□ 1.1
COL27A1-207ENST00000494090 FERMT2Q96AC1 680 aa21.92■■□□□ 1.1
COL27A1-207ENST00000494090 ALG1Q9BT22 464 aa21.92■■□□□ 1.1
COL27A1-207ENST00000494090 POLR3GO15318 223 aaPredicted RBP21.92■■□□□ 1.1
COL27A1-207ENST00000494090 DNM1Q05193 864 aaKnown RBP21.92■■□□□ 1.1
COL27A1-207ENST00000494090 CALCOCO1Q9P1Z2 691 aa21.92■■□□□ 1.1
COL27A1-207ENST00000494090 TCEANC2Q96MN5 208 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms